| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300748
Identifier: 146300748
GI number: 146300748
Start: 3545664
End: 3546524
Strand: Reverse
Name: 146300748
Synonym: Fjoh_2999
Alternate gene names: NA
Gene position: 3546524-3545664 (Counterclockwise)
Preceding gene: 146300749
Following gene: 146300746
Centisome position: 58.17
GC content: 50.99
Gene sequence:
>861_bases ATGAAAAGATATTATGAAAAATACTGGACGGCGGTGCTTGCAGTTCTCTGCGTCCAGCTGTGCTTTCCGCAGAGCAGCCT GCCGGTTATGGACGAGATCAAAGCCTGCCGGTTAGGCATAACCTATGACAAGACCTCGCACCTGATTTTCCCGTCGGAAA TCCGTTATGCCGACCTTGGAAGCGGGCTGCTCATGGCTGCAAAGGCCGAGGATGCGAATAATGTGCTCCGGGTCAAGGCG GCTGTAAGGGATTTTGAACAGCAGACCAATCTTTCGGTCATTACGACCGACGGCCGGTTCTACAGTTTTGATGTGCACTA TGATCCAAATCCGAAGATTCTGGGCTATAATATAGGTGCGAATGGGAATGCAGGATCGCAAAGCACCCTTTTTGAAGAGC TTGGTGAAAGCTCCCCAAGCACGGCGGAATCTGTGATGAAGCGCATCTATGACAATGATAAGCGGGTGATAAGGCATATC AGGACTAGGAATGCCGGAGCAGAATTCAGGCTGAACGGGATCTATGTCCATGATGGAAAATACTATTTCCATATCGCCCT GTACAACAGCACCAATGTGCCGTACAGGATCGATTTTCTGAACTTCAAAATAGCCGACAGGAACAAGGCCAGACGCACTG CGGTGCAGCAGAAAGCCATATCGCCTCTGCGCGTCTACAGGCCGGCTGGCGAGATCAAGGCCGGAGGCTCAGAGCGCTGC GTATACGTACTGGACCTTTTCACCCTTACGGACGGCAAGCTGCTGCTTATCGAGATATACGAGAAGAACGGAGGAAGGCA GCAGACCCTGAAGATTAAAAATTCGGATCTTCTGAAGGCGTGTCTTCCGGATACTCCATAG
Upstream 100 bases:
>100_bases TATTTCTCCAAAAAGGTAAAGACGCCAAAGGTAATGCTCAAGGCTGGGCACCAGCTTTTTCTGGTCTCCAAAAAACAATA GCAATCAAAAGAATATAAAG
Downstream 100 bases:
>100_bases AGGAAATCCGTGCAGGATAGAAGTGCAGGTCCGACGTAAATTCCTTAACAGACGGACAAAATAAAACCGGCCATATAGGT CGGTTTTTTGTTTTGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein Found In Conjugate Transposon TraN; Conjugative Transposon TraN Protein; Conjugate Transposon Protein; TraN-Like Secreted Protein; Conjugate Transposon; TraN-Like Conjugate Transposon Protein; Conjugate Transposon Protein Tran; Mating Contact Stablization Protein TraN
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKRYYEKYWTAVLAVLCVQLCFPQSSLPVMDEIKACRLGITYDKTSHLIFPSEIRYADLGSGLLMAAKAEDANNVLRVKA AVRDFEQQTNLSVITTDGRFYSFDVHYDPNPKILGYNIGANGNAGSQSTLFEELGESSPSTAESVMKRIYDNDKRVIRHI RTRNAGAEFRLNGIYVHDGKYYFHIALYNSTNVPYRIDFLNFKIADRNKARRTAVQQKAISPLRVYRPAGEIKAGGSERC VYVLDLFTLTDGKLLLIEIYEKNGGRQQTLKIKNSDLLKACLPDTP
Sequences:
>Translated_286_residues MKRYYEKYWTAVLAVLCVQLCFPQSSLPVMDEIKACRLGITYDKTSHLIFPSEIRYADLGSGLLMAAKAEDANNVLRVKA AVRDFEQQTNLSVITTDGRFYSFDVHYDPNPKILGYNIGANGNAGSQSTLFEELGESSPSTAESVMKRIYDNDKRVIRHI RTRNAGAEFRLNGIYVHDGKYYFHIALYNSTNVPYRIDFLNFKIADRNKARRTAVQQKAISPLRVYRPAGEIKAGGSERC VYVLDLFTLTDGKLLLIEIYEKNGGRQQTLKIKNSDLLKACLPDTP >Mature_286_residues MKRYYEKYWTAVLAVLCVQLCFPQSSLPVMDEIKACRLGITYDKTSHLIFPSEIRYADLGSGLLMAAKAEDANNVLRVKA AVRDFEQQTNLSVITTDGRFYSFDVHYDPNPKILGYNIGANGNAGSQSTLFEELGESSPSTAESVMKRIYDNDKRVIRHI RTRNAGAEFRLNGIYVHDGKYYFHIALYNSTNVPYRIDFLNFKIADRNKARRTAVQQKAISPLRVYRPAGEIKAGGSERC VYVLDLFTLTDGKLLLIEIYEKNGGRQQTLKIKNSDLLKACLPDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32356; Mature: 32356
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYYEKYWTAVLAVLCVQLCFPQSSLPVMDEIKACRLGITYDKTSHLIFPSEIRYADLG CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCEECCCCCCEEECC SGLLMAAKAEDANNVLRVKAAVRDFEQQTNLSVITTDGRFYSFDVHYDPNPKILGYNIGA CCEEEEEECCCCCCEEEHHHHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCEEEEECCC NGNAGSQSTLFEELGESSPSTAESVMKRIYDNDKRVIRHIRTRNAGAEFRLNGIYVHDGK CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEECCE YYFHIALYNSTNVPYRIDFLNFKIADRNKARRTAVQQKAISPLRVYRPAGEIKAGGSERC EEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE VYVLDLFTLTDGKLLLIEIYEKNGGRQQTLKIKNSDLLKACLPDTP EEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCC >Mature Secondary Structure MKRYYEKYWTAVLAVLCVQLCFPQSSLPVMDEIKACRLGITYDKTSHLIFPSEIRYADLG CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCEECCCCCCEEECC SGLLMAAKAEDANNVLRVKAAVRDFEQQTNLSVITTDGRFYSFDVHYDPNPKILGYNIGA CCEEEEEECCCCCCEEEHHHHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCEEEEECCC NGNAGSQSTLFEELGESSPSTAESVMKRIYDNDKRVIRHIRTRNAGAEFRLNGIYVHDGK CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEEECCE YYFHIALYNSTNVPYRIDFLNFKIADRNKARRTAVQQKAISPLRVYRPAGEIKAGGSERC EEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE VYVLDLFTLTDGKLLLIEIYEKNGGRQQTLKIKNSDLLKACLPDTP EEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA