| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300734
Identifier: 146300734
GI number: 146300734
Start: 3534821
End: 3535549
Strand: Direct
Name: 146300734
Synonym: Fjoh_2985
Alternate gene names: NA
Gene position: 3534821-3535549 (Clockwise)
Preceding gene: 146300733
Following gene: 146300735
Centisome position: 57.98
GC content: 50.62
Gene sequence:
>729_bases ATGAATAATAGAAACTATATTTCCGAACAGCTGGGCGTCCTTTACCATCCCACCTCCGCACTTGTGTTCTATCAGAGCCA GTCTGCGGACAGGTCGGTGTATGTCGAGCATTTCGATATGGACGGGGACGGAATGCCTGTCAACGCACACCCGCTTACCG AGCGTGAGGCGCAGGCGCTTGCAAAGGCTTTAATGACCGAAAAGCAGAAGCAGACCGCCTTTCTGAAATCCGAAGGCATC CTGCCCGCAAACATACTGCATATCATGCCAAGCCCTGACAGGGGCGCTGTGCTTTGGTATACCAAACCCCAAGAGAGAAC CCTGCATTTCATAGAAAGCCTTGAAATTGCGGACGGCAAGGCGCACATGCCTGCCATGATATGGCAGGCGACAAGAAACA GCCTCAGGGTATTTGCCATTGCCGGCAATAGAAGACCTACCGAAAAGACAGCCCTCTGCCATGCACCTCTTTTGAACATC TACGAGGACGGCAGGGTATGCATGGGGTCGGTCAGCATCAGCATCAAAAACTCCGCCTCGCTTGAAGAATTTACAGGGGC GTGGGAGGATTATTTCTTCAACAGCTACTTCAGCCACCTCATAGGCAAAAATAGTCCCGTAAAAGGATGCTGCATAAGCC TGTGGAAAGACCTGATTGCATCAGGAAGACCTTTCCCTGCCGAAGTATTGAAAAAAAACAGCAGAACACTTAAAAGCCTA CTGCCATGA
Upstream 100 bases:
>100_bases ATTGGCACGCGGAAGCACCAAAGCCTGGATTTCGAGCGCAGGTTCTTTTCCCTCTTGGATGACCTGTGCGGACTGCTGTA CAACTACAAATCAAACGACG
Downstream 100 bases:
>100_bases AAACAGAAAAGACCAAAATGCATTTTGCCGACACCTATCTCATCAGCCCCACAAACCCGCTTACAGTAAACCTTATAGGC GCTGGCGGTACAGGCTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNNRNYISEQLGVLYHPTSALVFYQSQSADRSVYVEHFDMDGDGMPVNAHPLTEREAQALAKALMTEKQKQTAFLKSEGI LPANILHIMPSPDRGAVLWYTKPQERTLHFIESLEIADGKAHMPAMIWQATRNSLRVFAIAGNRRPTEKTALCHAPLLNI YEDGRVCMGSVSISIKNSASLEEFTGAWEDYFFNSYFSHLIGKNSPVKGCCISLWKDLIASGRPFPAEVLKKNSRTLKSL LP
Sequences:
>Translated_242_residues MNNRNYISEQLGVLYHPTSALVFYQSQSADRSVYVEHFDMDGDGMPVNAHPLTEREAQALAKALMTEKQKQTAFLKSEGI LPANILHIMPSPDRGAVLWYTKPQERTLHFIESLEIADGKAHMPAMIWQATRNSLRVFAIAGNRRPTEKTALCHAPLLNI YEDGRVCMGSVSISIKNSASLEEFTGAWEDYFFNSYFSHLIGKNSPVKGCCISLWKDLIASGRPFPAEVLKKNSRTLKSL LP >Mature_242_residues MNNRNYISEQLGVLYHPTSALVFYQSQSADRSVYVEHFDMDGDGMPVNAHPLTEREAQALAKALMTEKQKQTAFLKSEGI LPANILHIMPSPDRGAVLWYTKPQERTLHFIESLEIADGKAHMPAMIWQATRNSLRVFAIAGNRRPTEKTALCHAPLLNI YEDGRVCMGSVSISIKNSASLEEFTGAWEDYFFNSYFSHLIGKNSPVKGCCISLWKDLIASGRPFPAEVLKKNSRTLKSL LP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27131; Mature: 27131
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRNYISEQLGVLYHPTSALVFYQSQSADRSVYVEHFDMDGDGMPVNAHPLTEREAQAL CCCCHHHHHHCCEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH AKALMTEKQKQTAFLKSEGILPANILHIMPSPDRGAVLWYTKPQERTLHFIESLEIADGK HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCC AHMPAMIWQATRNSLRVFAIAGNRRPTEKTALCHAPLLNIYEDGRVCMGSVSISIKNSAS CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC LEEFTGAWEDYFFNSYFSHLIGKNSPVKGCCISLWKDLIASGRPFPAEVLKKNSRTLKSL HHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH LP CC >Mature Secondary Structure MNNRNYISEQLGVLYHPTSALVFYQSQSADRSVYVEHFDMDGDGMPVNAHPLTEREAQAL CCCCHHHHHHCCEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH AKALMTEKQKQTAFLKSEGILPANILHIMPSPDRGAVLWYTKPQERTLHFIESLEIADGK HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCC AHMPAMIWQATRNSLRVFAIAGNRRPTEKTALCHAPLLNIYEDGRVCMGSVSISIKNSAS CCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC LEEFTGAWEDYFFNSYFSHLIGKNSPVKGCCISLWKDLIASGRPFPAEVLKKNSRTLKSL HHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH LP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA