| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300725
Identifier: 146300725
GI number: 146300725
Start: 3527150
End: 3527620
Strand: Direct
Name: 146300725
Synonym: Fjoh_2976
Alternate gene names: NA
Gene position: 3527150-3527620 (Clockwise)
Preceding gene: 146300722
Following gene: 146300726
Centisome position: 57.85
GC content: 37.37
Gene sequence:
>471_bases ATGGTATTTACAGCAGTAAATTTAAAAAAGCATTTGGGCAAGACGCTGCCGCAGATTTTGTTTGCCGATTTAGATTATTT CATTTGGGCATACGAGAACAACGTTTTCAGAAATCCGCCTCTTAAGCTGGAAGCAGAGTACATATTTAAAAGGATTAAGA ACATAAAAATTCCAAAAGAAAACCCAGAAGAATACGAAGTGGAATACCTGATCCATCAGCCTACCGGCAAATTCGGTCAT TTTGAACTGGTGCCTAAAACTACACCCCTGCACAAGGGTGGAAGTCCCGCTTTCAGAACCGAAAATATAGATCTAACTGT TGCCAGATCTATTGCAGCTTACGACAAAAGCGGATGCCGTACCATGATAGAATACTTAAAAAAATATTATTTCGGCGATA GCAGCTATAAAATGGTTAAAAAAAGGTGTGAGGATTTTTTCAATAAGGATTCAAATTTCGTCTTATTATAA
Upstream 100 bases:
>100_bases GTCTATCAATTAGAGATAGCTGATTTGTTATTTTTAAAGAGTATATTTACATTAGAATTCCGCCAATAATCAGCATTTTA ATTAAAAAAATGAAATCGCT
Downstream 100 bases:
>100_bases TTTCACATAATTATGAAACCGAGTTTTAATTATTTTATCGGTAAAAGTACCGCAGCAATTTATAAACTCTGCATTGGAAA AGGCAACGCAAAGGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MVFTAVNLKKHLGKTLPQILFADLDYFIWAYENNVFRNPPLKLEAEYIFKRIKNIKIPKENPEEYEVEYLIHQPTGKFGH FELVPKTTPLHKGGSPAFRTENIDLTVARSIAAYDKSGCRTMIEYLKKYYFGDSSYKMVKKRCEDFFNKDSNFVLL
Sequences:
>Translated_156_residues MVFTAVNLKKHLGKTLPQILFADLDYFIWAYENNVFRNPPLKLEAEYIFKRIKNIKIPKENPEEYEVEYLIHQPTGKFGH FELVPKTTPLHKGGSPAFRTENIDLTVARSIAAYDKSGCRTMIEYLKKYYFGDSSYKMVKKRCEDFFNKDSNFVLL >Mature_156_residues MVFTAVNLKKHLGKTLPQILFADLDYFIWAYENNVFRNPPLKLEAEYIFKRIKNIKIPKENPEEYEVEYLIHQPTGKFGH FELVPKTTPLHKGGSPAFRTENIDLTVARSIAAYDKSGCRTMIEYLKKYYFGDSSYKMVKKRCEDFFNKDSNFVLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18315; Mature: 18315
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFTAVNLKKHLGKTLPQILFADLDYFIWAYENNVFRNPPLKLEAEYIFKRIKNIKIPKE CEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEHHHHHHHHHCCCCCCC NPEEYEVEYLIHQPTGKFGHFELVPKTTPLHKGGSPAFRTENIDLTVARSIAAYDKSGCR CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEHHHHHHHHCCCCHH TMIEYLKKYYFGDSSYKMVKKRCEDFFNKDSNFVLL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEC >Mature Secondary Structure MVFTAVNLKKHLGKTLPQILFADLDYFIWAYENNVFRNPPLKLEAEYIFKRIKNIKIPKE CEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEHHHHHHHHHCCCCCCC NPEEYEVEYLIHQPTGKFGHFELVPKTTPLHKGGSPAFRTENIDLTVARSIAAYDKSGCR CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEHHHHHHHHCCCCHH TMIEYLKKYYFGDSSYKMVKKRCEDFFNKDSNFVLL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA