| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300678
Identifier: 146300678
GI number: 146300678
Start: 3472535
End: 3473359
Strand: Direct
Name: 146300678
Synonym: Fjoh_2929
Alternate gene names: NA
Gene position: 3472535-3473359 (Clockwise)
Preceding gene: 146300675
Following gene: 146300679
Centisome position: 56.96
GC content: 33.45
Gene sequence:
>825_bases ATGGCGAAATTCCAAAGTTACAAAGGTTTGATCAACAAATCGAATGAAATTTGTAAGTTTACGATAGAAAATAAATCAAA CGTGTCTACATCCAAAAAAGCCTTATTTAACTGGAGCAGCGGAAAAGATTCTGCTCTTGCATTATACAAAATCTTACACA ATCCAGATTACAAAATTGAATATCTGCTTACCAGTGTAAACCAGCAGTATCAGCGGATTTCTATGCACGGTGTTCGTGTA GATTTATTGGAAGCACAATCTAAAAGTATTGGAATTCCTTTAAAAGTTATGCAGATTCCTGAAATGCCAACAATGGAGGT TTACGAAAATGTAATGACAGAAACCTTGACAGAACTTAAAAATCAAGGAATTACTTATTCTGTTTTTGGGGATATTTTTT TGGAAGATTTACGAAAATATCGTGAAGAACAATTAGCAAAAATAGGTTTTGAAGGTGTGTTTCCAATTTGGAAAATTCCA TCGCATGATTTGATTCAGGAATTCATTTCCCTCGGATTTAAAACTATTGTAGTTTGTGTAAATGAACGTTATTTAGACAA AAGCTTTGTGGGCCGCATAATCGATCAGAATTTTATAAATGATTTACCTGAAAATGTAGATGTCTGCGGAGAGAACGGTG AATTTCATACTTTTACTTTTGATGGTCCAATCTTTTCTGAACCTATCAATTTTAAAGCCGGAGAGATTGTCTACCGAAAA TATGAAAAACCGCAAAATCAGAATTCATCGGATGCAGCATGCGACACAAATACCTCTGATGCATTTGATTACGGATTTTG GTATTGTGATTTAATTAAAGAATAA
Upstream 100 bases:
>100_bases TAATTGTCCTGAAACCGTTTTAAAGTCAACATATTTGGTTTGCTGTGCAAAAACGAAGGTGGTTATTAAAAGGAAGATAT ATTTCATTGAAAATAAATTA
Downstream 100 bases:
>100_bases TGAATAGATTTTATCTAAAAAAAGCAATTGTTTTTATACTGCTCATTGCAGCGATTAGTACTTTGCAAAGCTGTTTAGTC AGCCGTTGTAAAAGACCTCA
Product: putative ATP binding protein
Products: NA
Alternate protein names: PP-Loop ATPase; N-Type ATP Pyrophosphatase Superfamily Protein; ATPase Of PP-Loop Superfamily
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAKFQSYKGLINKSNEICKFTIENKSNVSTSKKALFNWSSGKDSALALYKILHNPDYKIEYLLTSVNQQYQRISMHGVRV DLLEAQSKSIGIPLKVMQIPEMPTMEVYENVMTETLTELKNQGITYSVFGDIFLEDLRKYREEQLAKIGFEGVFPIWKIP SHDLIQEFISLGFKTIVVCVNERYLDKSFVGRIIDQNFINDLPENVDVCGENGEFHTFTFDGPIFSEPINFKAGEIVYRK YEKPQNQNSSDAACDTNTSDAFDYGFWYCDLIKE
Sequences:
>Translated_274_residues MAKFQSYKGLINKSNEICKFTIENKSNVSTSKKALFNWSSGKDSALALYKILHNPDYKIEYLLTSVNQQYQRISMHGVRV DLLEAQSKSIGIPLKVMQIPEMPTMEVYENVMTETLTELKNQGITYSVFGDIFLEDLRKYREEQLAKIGFEGVFPIWKIP SHDLIQEFISLGFKTIVVCVNERYLDKSFVGRIIDQNFINDLPENVDVCGENGEFHTFTFDGPIFSEPINFKAGEIVYRK YEKPQNQNSSDAACDTNTSDAFDYGFWYCDLIKE >Mature_273_residues AKFQSYKGLINKSNEICKFTIENKSNVSTSKKALFNWSSGKDSALALYKILHNPDYKIEYLLTSVNQQYQRISMHGVRVD LLEAQSKSIGIPLKVMQIPEMPTMEVYENVMTETLTELKNQGITYSVFGDIFLEDLRKYREEQLAKIGFEGVFPIWKIPS HDLIQEFISLGFKTIVVCVNERYLDKSFVGRIIDQNFINDLPENVDVCGENGEFHTFTFDGPIFSEPINFKAGEIVYRKY EKPQNQNSSDAACDTNTSDAFDYGFWYCDLIKE
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31544; Mature: 31413
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFQSYKGLINKSNEICKFTIENKSNVSTSKKALFNWSSGKDSALALYKILHNPDYKIE CCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCEEH YLLTSVNQQYQRISMHGVRVDLLEAQSKSIGIPLKVMQIPEMPTMEVYENVMTETLTELK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH NQGITYSVFGDIFLEDLRKYREEQLAKIGFEGVFPIWKIPSHDLIQEFISLGFKTIVVCV HCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCHHEEEEEC NERYLDKSFVGRIIDQNFINDLPENVDVCGENGEFHTFTFDGPIFSEPINFKAGEIVYRK CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH YEKPQNQNSSDAACDTNTSDAFDYGFWYCDLIKE HCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCC >Mature Secondary Structure AKFQSYKGLINKSNEICKFTIENKSNVSTSKKALFNWSSGKDSALALYKILHNPDYKIE CCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCEEH YLLTSVNQQYQRISMHGVRVDLLEAQSKSIGIPLKVMQIPEMPTMEVYENVMTETLTELK HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH NQGITYSVFGDIFLEDLRKYREEQLAKIGFEGVFPIWKIPSHDLIQEFISLGFKTIVVCV HCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCHHEEEEEC NERYLDKSFVGRIIDQNFINDLPENVDVCGENGEFHTFTFDGPIFSEPINFKAGEIVYRK CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH YEKPQNQNSSDAACDTNTSDAFDYGFWYCDLIKE HCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA