| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300640
Identifier: 146300640
GI number: 146300640
Start: 3430465
End: 3431808
Strand: Reverse
Name: 146300640
Synonym: Fjoh_2891
Alternate gene names: NA
Gene position: 3431808-3430465 (Counterclockwise)
Preceding gene: 146300641
Following gene: 146300639
Centisome position: 56.29
GC content: 33.18
Gene sequence:
>1344_bases ATGAAAATAAAACATATATATAAGTTCCTCTTAGTTGGTCTTGTGGCTGTTATTATGGGAGCATGTACAAGTACAGAAGC TGATCCAAAATTTGACGAAAGTCCAATTGAAAGATTAAATGCAAGAAAAAAAGAACTAAACGATTTATTACTTTCTTCTG CAGACGGTTGGAAAGCTGTTTATTATACAGACAGCACTCAATTAGGAGCATGGACGCATTTATTTAAATTTTTGCCAGAC GGAAAAGTTGATATGGCATCAGATTTTGATGATGATACAGATATTCACAGAAGTCAGTATGATATTCAATTAGGAAGTGC AGTGAGTTTAGTTTTTACAACTGCTAACAGAATACATCTTTTATCAGAATCAGATAATTATCCAACTCCGGCACTTGTTG GGAAAGGACATCTTGGAGACTTTCAGTTTTTCTACTATGGTCAGGAAAATGGAGAAATCATTTTTAGAACCAATAGAAGT TTTCAGGAGCTGAGATTTAAAAAAGCTACAGCAAAAGACTGGGATGATCTGCATGATAATACCCCAGTAATAGAAGCAAT AACAGGAGAAATTACAAGTCCATTATTCAGATTGTTAGAAATTAACGATGGAGCTGCAGTGCAAAATTATGATTTAGATT ATAATCCAGATGCTCGTTTTGGAGTAGCAGCATCTTTAGTACCTGGCAGTAATGATTTGATTAATATGTCTTTTGCCTTT ACTCCAGCAGGAGCAGTTGTTGAACCGCCAGTTGAAGTTAAAGGACAAAAATTAACTAATTTTAGCTATAACAGTACTGA TGATACTTTTGTTTCAACAGGAACAGGAGGTGTAAAAGCAACTATTAAGTATACAACTGTACCGCCTGTAATAACTGATG ATTACAAAAAAGGTATTGACGGTCAGCCTCAATTTGTTATATCTTATATAGCGGCTAATTTATATTCAGCACCAACAACT TCTAATTACTTCAGATCATTAATTTTAAAAGCAAATGCTGCATTACCAGCAAATCAATCTATAGCCAGAATTCAGATTTA TTTTAATTCTGCTTTTGGAAATTACATTGAATATCGTTTTAATGGAGGAAGACCATCTGTTTATCATAACTTTACGACAA CTCCAAATAATACAGCTAAAACATTAGTATTTAATCATGATTCATGGGATAATGGTTCAGCAATTATTCCTGCTCCAGCA TTCTTAAAAGACCTTGACGCAGAGTTCTTTACTCCTGCAGGTATGTACATTAAAAAGGAAAATTTCACAATTTCTTTTAT TAATACAATTTATACAATGACAAGTGCTTCTAGTAGTTTTAGAACCACAACATATCAGTTATAA
Upstream 100 bases:
>100_bases CGGAATGGATTTTTACGCTTTAAGAGACGAAGCGCAAAAAAATACAACCACAGTTATCAACAATTAAGACTTGTAATAAT CTAATTATAAAATCAATATT
Downstream 100 bases:
>100_bases TTTATAAACTAAAAAGCAGTTCAATTATTGAGCTGCTTTTTTAAACTAAAATAAACAATGAAAAAAATAATTACACCAGC GAGTATTATCATCTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKIKHIYKFLLVGLVAVIMGACTSTEADPKFDESPIERLNARKKELNDLLLSSADGWKAVYYTDSTQLGAWTHLFKFLPD GKVDMASDFDDDTDIHRSQYDIQLGSAVSLVFTTANRIHLLSESDNYPTPALVGKGHLGDFQFFYYGQENGEIIFRTNRS FQELRFKKATAKDWDDLHDNTPVIEAITGEITSPLFRLLEINDGAAVQNYDLDYNPDARFGVAASLVPGSNDLINMSFAF TPAGAVVEPPVEVKGQKLTNFSYNSTDDTFVSTGTGGVKATIKYTTVPPVITDDYKKGIDGQPQFVISYIAANLYSAPTT SNYFRSLILKANAALPANQSIARIQIYFNSAFGNYIEYRFNGGRPSVYHNFTTTPNNTAKTLVFNHDSWDNGSAIIPAPA FLKDLDAEFFTPAGMYIKKENFTISFINTIYTMTSASSSFRTTTYQL
Sequences:
>Translated_447_residues MKIKHIYKFLLVGLVAVIMGACTSTEADPKFDESPIERLNARKKELNDLLLSSADGWKAVYYTDSTQLGAWTHLFKFLPD GKVDMASDFDDDTDIHRSQYDIQLGSAVSLVFTTANRIHLLSESDNYPTPALVGKGHLGDFQFFYYGQENGEIIFRTNRS FQELRFKKATAKDWDDLHDNTPVIEAITGEITSPLFRLLEINDGAAVQNYDLDYNPDARFGVAASLVPGSNDLINMSFAF TPAGAVVEPPVEVKGQKLTNFSYNSTDDTFVSTGTGGVKATIKYTTVPPVITDDYKKGIDGQPQFVISYIAANLYSAPTT SNYFRSLILKANAALPANQSIARIQIYFNSAFGNYIEYRFNGGRPSVYHNFTTTPNNTAKTLVFNHDSWDNGSAIIPAPA FLKDLDAEFFTPAGMYIKKENFTISFINTIYTMTSASSSFRTTTYQL >Mature_447_residues MKIKHIYKFLLVGLVAVIMGACTSTEADPKFDESPIERLNARKKELNDLLLSSADGWKAVYYTDSTQLGAWTHLFKFLPD GKVDMASDFDDDTDIHRSQYDIQLGSAVSLVFTTANRIHLLSESDNYPTPALVGKGHLGDFQFFYYGQENGEIIFRTNRS FQELRFKKATAKDWDDLHDNTPVIEAITGEITSPLFRLLEINDGAAVQNYDLDYNPDARFGVAASLVPGSNDLINMSFAF TPAGAVVEPPVEVKGQKLTNFSYNSTDDTFVSTGTGGVKATIKYTTVPPVITDDYKKGIDGQPQFVISYIAANLYSAPTT SNYFRSLILKANAALPANQSIARIQIYFNSAFGNYIEYRFNGGRPSVYHNFTTTPNNTAKTLVFNHDSWDNGSAIIPAPA FLKDLDAEFFTPAGMYIKKENFTISFINTIYTMTSASSSFRTTTYQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49678; Mature: 49678
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKHIYKFLLVGLVAVIMGACTSTEADPKFDESPIERLNARKKELNDLLLSSADGWKAV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE YYTDSTQLGAWTHLFKFLPDGKVDMASDFDDDTDIHRSQYDIQLGSAVSLVFTTANRIHL EEECCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEE LSESDNYPTPALVGKGHLGDFQFFYYGQENGEIIFRTNRSFQELRFKKATAKDWDDLHDN EECCCCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCC TPVIEAITGEITSPLFRLLEINDGAAVQNYDLDYNPDARFGVAASLVPGSNDLINMSFAF CCEEEEHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEE TPAGAVVEPPVEVKGQKLTNFSYNSTDDTFVSTGTGGVKATIKYTTVPPVITDDYKKGID CCCCCEECCCCCCCCCEEECCCCCCCCCCEEECCCCCEEEEEEEEECCCEECCHHHCCCC GQPQFVISYIAANLYSAPTTSNYFRSLILKANAALPANQSIARIQIYFNSAFGNYIEYRF CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEE NGGRPSVYHNFTTTPNNTAKTLVFNHDSWDNGSAIIPAPAFLKDLDAEFFTPAGMYIKKE CCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHCCHHHCCCCCCEEEEC NFTISFINTIYTMTSASSSFRTTTYQL CCEEEEEEHHHHHHCCCCCCCEEEECC >Mature Secondary Structure MKIKHIYKFLLVGLVAVIMGACTSTEADPKFDESPIERLNARKKELNDLLLSSADGWKAV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE YYTDSTQLGAWTHLFKFLPDGKVDMASDFDDDTDIHRSQYDIQLGSAVSLVFTTANRIHL EEECCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEE LSESDNYPTPALVGKGHLGDFQFFYYGQENGEIIFRTNRSFQELRFKKATAKDWDDLHDN EECCCCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCC TPVIEAITGEITSPLFRLLEINDGAAVQNYDLDYNPDARFGVAASLVPGSNDLINMSFAF CCEEEEHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEE TPAGAVVEPPVEVKGQKLTNFSYNSTDDTFVSTGTGGVKATIKYTTVPPVITDDYKKGID CCCCCEECCCCCCCCCEEECCCCCCCCCCEEECCCCCEEEEEEEEECCCEECCHHHCCCC GQPQFVISYIAANLYSAPTTSNYFRSLILKANAALPANQSIARIQIYFNSAFGNYIEYRF CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEE NGGRPSVYHNFTTTPNNTAKTLVFNHDSWDNGSAIIPAPAFLKDLDAEFFTPAGMYIKKE CCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHCCHHHCCCCCCEEEEC NFTISFINTIYTMTSASSSFRTTTYQL CCEEEEEEHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA