| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300598
Identifier: 146300598
GI number: 146300598
Start: 3378721
End: 3379254
Strand: Direct
Name: 146300598
Synonym: Fjoh_2848
Alternate gene names: NA
Gene position: 3378721-3379254 (Clockwise)
Preceding gene: 146300595
Following gene: 146300599
Centisome position: 55.42
GC content: 30.9
Gene sequence:
>534_bases ATGAGCAAACGCGATTTAAAAAAATATTTAGCCGAATTAACCAAAGAACAACTAGAGGAACAACTCATTGAATTGTATGA AAAGTTCAGTCCTGTAAAAGTCTATTATGACTTTGTTTTTAATCCAAAAGAAGACAAACTGCTGCAGGAATCAAAAGTTA AAATTTCGCATGAATATTTTCCGGTAAAAAAGCCCAATGCAAAATGGCGTCCGAAAGCAAAAATGCGGCGCTCTGTTGCT CAAAAAATCATAAAACATTTCATTTCTTTAGGTGTTGATTCATTTATAATTGCCGATTTGATGTTTTATAACATAGAAAT TGCGCAAACGTATTCGTCAAATAATTTTATTAAGCAGGAATTGTTTTACAAAAGCATGTTTAATTCATTTGAGCAGGCAG TAAATTTTGTTATTTCAAATGGAATTTTGAATGAATTTAAAGCAAGAATTGAAGCAGTTTATCAGGAGACTTTGCAGCAA AAATGGAAAAACAGGTATGATTTTGAAGCAATTCTGGAGAAAATTGACTTTTAA
Upstream 100 bases:
>100_bases ATATATTTTTGAGATTATGCAGGCAAAATTAAGTATTAGGATTGGTTTTTGGGTTATGTGTCAGGAAAGTAATTTACTTT TGTATTCTTAAACTTTGATA
Downstream 100 bases:
>100_bases AAACATTTCCTATAAAAAATCTTAGTTTAAAAAAAACATTTATTTTAGGTTAAAATAAGATGAATAACTGTTTTTTAGAT GTATTTTTGCAAAAATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSKRDLKKYLAELTKEQLEEQLIELYEKFSPVKVYYDFVFNPKEDKLLQESKVKISHEYFPVKKPNAKWRPKAKMRRSVA QKIIKHFISLGVDSFIIADLMFYNIEIAQTYSSNNFIKQELFYKSMFNSFEQAVNFVISNGILNEFKARIEAVYQETLQQ KWKNRYDFEAILEKIDF
Sequences:
>Translated_177_residues MSKRDLKKYLAELTKEQLEEQLIELYEKFSPVKVYYDFVFNPKEDKLLQESKVKISHEYFPVKKPNAKWRPKAKMRRSVA QKIIKHFISLGVDSFIIADLMFYNIEIAQTYSSNNFIKQELFYKSMFNSFEQAVNFVISNGILNEFKARIEAVYQETLQQ KWKNRYDFEAILEKIDF >Mature_176_residues SKRDLKKYLAELTKEQLEEQLIELYEKFSPVKVYYDFVFNPKEDKLLQESKVKISHEYFPVKKPNAKWRPKAKMRRSVAQ KIIKHFISLGVDSFIIADLMFYNIEIAQTYSSNNFIKQELFYKSMFNSFEQAVNFVISNGILNEFKARIEAVYQETLQQK WKNRYDFEAILEKIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21269; Mature: 21138
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRDLKKYLAELTKEQLEEQLIELYEKFSPVKVYYDFVFNPKEDKLLQESKVKISHEYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC PVKKPNAKWRPKAKMRRSVAQKIIKHFISLGVDSFIIADLMFYNIEIAQTYSSNNFIKQE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LFYKSMFNSFEQAVNFVISNGILNEFKARIEAVYQETLQQKWKNRYDFEAILEKIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure SKRDLKKYLAELTKEQLEEQLIELYEKFSPVKVYYDFVFNPKEDKLLQESKVKISHEYF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC PVKKPNAKWRPKAKMRRSVAQKIIKHFISLGVDSFIIADLMFYNIEIAQTYSSNNFIKQE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LFYKSMFNSFEQAVNFVISNGILNEFKARIEAVYQETLQQKWKNRYDFEAILEKIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA