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The map label for this gene is glgB [H]

Identifier: 146300495

GI number: 146300495

Start: 3274873

End: 3276777

Strand: Direct

Name: glgB [H]

Synonym: Fjoh_2745

Alternate gene names: 146300495

Gene position: 3274873-3276777 (Clockwise)

Preceding gene: 146300493

Following gene: 146300496

Centisome position: 53.71

GC content: 35.59

Gene sequence:

>1905_bases
ATGACTAAAGTAATCGTACATTCTCTATTTACCGATTTTGATATAGATTTATTCAAAGCGGGAAAACACTTCAAATTATA
TGAAAAATTAGGAGCACATTTAATTGAAGTTAATGGAGTAAAAGGCGTTTATTTTGCCGTTTGGGCTCCCACGGCACAGT
CGGTTTCGGTTGTGGGCGATTTTAATTACTGGACACAAGGCGAACACAATTTAAATGTTCGCTGGGATTCTTCTGGAATT
TGGGAAGGATTTATTCCCGATATTTCAAAAGGAGCTCTTTATAAATATAAAATTCAATCGAGTATAAATGGTGTAATTAC
TGAAAAAGCAGATCCTTTTGCTCTTTATTGTGAAAAACCACCGCATACGGCTTCTGTTGTCTGGGATTTAGACTATAAAT
GGAAGGATGAAAACTGGATGCAGAACCGCCAGCAGCATAATGCTTTAGATAAACCATATTCTGTTTATGAAGTTCATTTA
GGTTCCTGGAAACGAGCTGATCATAACAGGTTTTTAAGTTATTTAGAACTGGCAGATGATCTGGTAAAATACGTTAAAGA
AACCGGTTTTACGCATGTTGAATTTATGCCGATTATGGAATATCCTTATGATCCTTCATGGGGTTATCAGTTAACAGGAT
ATTTTGCGCCGACTTCGCGTTTTGGAAAACCACAGGACTTTATGGTTTTGGTTGACAGGCTGCATCAGGAAGGAATTGGA
GTGATTCTGGACTGGGTTCCGTCGCATTTTCCAGATGATGCGCATGGTTTAGGTTATTTTGACGGTTCTCATTTATATGA
ACATCCAGATCGTAGAAAAGGCTATCATCCGGATTGGAAAAGCTTGGTTTTTAATTATGGAAGAAATGAAGTCCGCGCTT
TTTTAATCAGCAATGCTGTTTTCTGGCTTCAAAATTATCATGTAGACGGATTAAGAGTAGATGCTGTGGCCTCGATGTTG
TATCTTGATTATTCCAGAAAAGAAGGCGAGTGGGAAGCCAATATTTTTGGCGGAAGAGAGAATTTAGACAGTATAAGTTT
TCTTAAAGAATTTAATGAAGTTATTTATGCTAATTTTTATGGAGTTCAGACTATTGCAGAAGAAAGCACTTCATTTCCTA
TGGTTTCCAGACCAACCTTTACCGGAGGTTTAGGTTTTGGAATGAAATGGATGATGGGCTGGATGCACGATACTTTAAAA
TATTTTCAAAAAGAAACGGTTTATAGAAAATACCATCAAAACGATTTGACGTTTTCGATGACATACGCTTTTACCGAAAA
CTTTATGCTTCCGTTTTCTCATGACGAAGTTGTTTACGGCAAACAATCTCTAATTTATAAAATGCCGGGCGACGAATGGC
AGCGATTTGCTAATTTAAGATTGTTGTACGGTTATATGTTCACGCATCCGGGAACTAAATTATTGTTTATGGGGGCAGAA
TTTGGTCAAACCAGCGAATGGAATTTTGAACAAAGTTTAGACTGGCATTTACTGCAATATGATTTTCATTCTGGAATAAA
GAGATTAATTACAGATTTAAATCAGTTATATAAATCTCAACCTGCATTGTATGAAAAGCAATTTACAGCAGATGGTTTTG
AATGGATAAATTATTCAGATCATCAAAATGCGGTTTTATCTTATATCCGAAAAGGAAATAATCCAGATGAAAATGTCATT
GTAGTTTGTAATTTCACGCAGGTAGTACGTGAAAATTATAGAATTGGAATTTCTAAAAAAGGAAAATTAGAAGAAATTTT
TAATAGTGATGCTTCTATTTATGGAGGAAGCGGCATAGAAAATGGAAAATCTCTAAAAATCGAATCAATTCCGTATGATG
GCAGGGAATTTTCAGTCGAATTAATTTTACCGCCATTAAGTGTAACGGTATATTCTTTCAGTTAG

Upstream 100 bases:

>100_bases
ATATCAATATCAATACCAATATCAATATCAATACCAATATCAATATCAATACCAATATCAATATCAATATCAATATCAAT
TTTTGCCTTAAAAATCAAAC

Downstream 100 bases:

>100_bases
AAAAAATCTTACAATTATTTTTAGAAGTGCTTTTTTGTCATTTTTCGGTCATAAATTATCGATATTTCGATTTTTTGAGC
TGTAATTTAATTCTCAGCCA

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MTKVIVHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAQSVSVVGDFNYWTQGEHNLNVRWDSSGI
WEGFIPDISKGALYKYKIQSSINGVITEKADPFALYCEKPPHTASVVWDLDYKWKDENWMQNRQQHNALDKPYSVYEVHL
GSWKRADHNRFLSYLELADDLVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDRLHQEGIG
VILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAVFWLQNYHVDGLRVDAVASML
YLDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFYGVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLK
YFQKETVYRKYHQNDLTFSMTYAFTENFMLPFSHDEVVYGKQSLIYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAE
FGQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSQPALYEKQFTADGFEWINYSDHQNAVLSYIRKGNNPDENVI
VVCNFTQVVRENYRIGISKKGKLEEIFNSDASIYGGSGIENGKSLKIESIPYDGREFSVELILPPLSVTVYSFS

Sequences:

>Translated_634_residues
MTKVIVHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAQSVSVVGDFNYWTQGEHNLNVRWDSSGI
WEGFIPDISKGALYKYKIQSSINGVITEKADPFALYCEKPPHTASVVWDLDYKWKDENWMQNRQQHNALDKPYSVYEVHL
GSWKRADHNRFLSYLELADDLVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDRLHQEGIG
VILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAVFWLQNYHVDGLRVDAVASML
YLDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFYGVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLK
YFQKETVYRKYHQNDLTFSMTYAFTENFMLPFSHDEVVYGKQSLIYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAE
FGQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSQPALYEKQFTADGFEWINYSDHQNAVLSYIRKGNNPDENVI
VVCNFTQVVRENYRIGISKKGKLEEIFNSDASIYGGSGIENGKSLKIESIPYDGREFSVELILPPLSVTVYSFS
>Mature_633_residues
TKVIVHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAQSVSVVGDFNYWTQGEHNLNVRWDSSGIW
EGFIPDISKGALYKYKIQSSINGVITEKADPFALYCEKPPHTASVVWDLDYKWKDENWMQNRQQHNALDKPYSVYEVHLG
SWKRADHNRFLSYLELADDLVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDRLHQEGIGV
ILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAVFWLQNYHVDGLRVDAVASMLY
LDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFYGVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLKY
FQKETVYRKYHQNDLTFSMTYAFTENFMLPFSHDEVVYGKQSLIYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAEF
GQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSQPALYEKQFTADGFEWINYSDHQNAVLSYIRKGNNPDENVIV
VCNFTQVVRENYRIGISKKGKLEEIFNSDASIYGGSGIENGKSLKIESIPYDGREFSVELILPPLSVTVYSFS

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=662, Percent_Identity=27.3413897280967, Blast_Score=190, Evalue=4e-48,
Organism=Escherichia coli, GI1789839, Length=623, Percent_Identity=51.2038523274478, Blast_Score=641, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=641, Percent_Identity=26.2090483619345, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI32564391, Length=600, Percent_Identity=25.3333333333333, Blast_Score=172, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6320826, Length=616, Percent_Identity=25.487012987013, Blast_Score=167, Evalue=6e-42,
Organism=Drosophila melanogaster, GI28573410, Length=673, Percent_Identity=27.9346210995542, Blast_Score=198, Evalue=9e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 73751; Mature: 73620

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVIVHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAQSVSVVGD
CCCEEEEHHHCCCCCHHHHCCCCEEHHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEEC
FNYWTQGEHNLNVRWDSSGIWEGFIPDISKGALYKYKIQSSINGVITEKADPFALYCEKP
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCC
PHTASVVWDLDYKWKDENWMQNRQQHNALDKPYSVYEVHLGSWKRADHNRFLSYLELADD
CCCEEEEEEECEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDRLHQEGIG
HHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCE
VILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHE
FWLQNYHVDGLRVDAVASMLYLDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFY
EEEEECCCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEC
GVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLKYFQKETVYRKYHQNDLTFSM
CHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
TYAFTENFMLPFSHDEVVYGKQSLIYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAE
EEEEECCEECCCCCCCEEECCCEEEEECCCHHHHHHHHHHEEEEEEEECCCCEEEEEECC
FGQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSQPALYEKQFTADGFEWINYSD
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCC
HQNAVLSYIRKGNNPDENVIVVCNFTQVVRENYRIGISKKGKLEEIFNSDASIYGGSGIE
CHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCEECCCCCCCHHHHHCCCCCEECCCCCC
NGKSLKIESIPYDGREFSVELILPPLSVTVYSFS
CCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEC
>Mature Secondary Structure 
TKVIVHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAQSVSVVGD
CCEEEEHHHCCCCCHHHHCCCCEEHHHHHCCEEEEECCCCEEEEEEECCCCCCEEEEEC
FNYWTQGEHNLNVRWDSSGIWEGFIPDISKGALYKYKIQSSINGVITEKADPFALYCEKP
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCC
PHTASVVWDLDYKWKDENWMQNRQQHNALDKPYSVYEVHLGSWKRADHNRFLSYLELADD
CCCEEEEEEECEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDRLHQEGIG
HHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCE
VILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHE
FWLQNYHVDGLRVDAVASMLYLDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFY
EEEEECCCCCEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEC
GVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLKYFQKETVYRKYHQNDLTFSM
CHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
TYAFTENFMLPFSHDEVVYGKQSLIYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAE
EEEEECCEECCCCCCCEEECCCEEEEECCCHHHHHHHHHHEEEEEEEECCCCEEEEEECC
FGQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSQPALYEKQFTADGFEWINYSD
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCC
HQNAVLSYIRKGNNPDENVIVVCNFTQVVRENYRIGISKKGKLEEIFNSDASIYGGSGIE
CHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCEECCCCCCCHHHHHCCCCCEECCCCCC
NGKSLKIESIPYDGREFSVELILPPLSVTVYSFS
CCCEEEEEECCCCCCEEEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]