| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300433
Identifier: 146300433
GI number: 146300433
Start: 3191569
End: 3192078
Strand: Direct
Name: 146300433
Synonym: Fjoh_2682
Alternate gene names: NA
Gene position: 3191569-3192078 (Clockwise)
Preceding gene: 146300432
Following gene: 146300434
Centisome position: 52.35
GC content: 40.78
Gene sequence:
>510_bases ATGGCAACACCTTATTTAGGAGAAATACGTATCGTGTCTTTTAACTTTGCTCCGAAAGGCTGGGCTTTATGTAATGGGCA GTTTTTGCCTATAAATCAAAATCAAGCTTTGTTTTCTCTATTGGGAACTATGTATGGCGGCAATGGACAAACAACATTTG CTTTGCCGAATTTAAGAGGAAGGACTCCCATTCATTTTGGAAATGGGCATACAATAGGAGAAAAAGGCGGAGAAGAAGCC CATACTTTAAGCATATCAGAGCTGCCTGAGCATACCCATGTACTTCAGGCGAAAACAGATACGGCAAGTACCAATATACC CAGCTCTTCAAATTTTGTGGCTAATACCGCTCCTAATTTAGTTTATAGCGGCCAAAGTCAAAATTTTACTTCGATGAACT CGGGATCTCTTACCAGTGTCGGCGGAAACCAGCCCCATTTAAACATGCAGCCATTCCTTACCTTGAATTTTTGCATTGCT CTAATAGGCGCTTTTCCTTCTCAAAATTAA
Upstream 100 bases:
>100_bases ATTGTATACCAAAAAGAAATAATTTCAAAGCATAATTTTGCCGCTGATTCTTTTGTGGCCTAATATAATTGCTTGAATAA CTTAATAAATAGTCAAAATT
Downstream 100 bases:
>100_bases TATTAACTTTAAAAAGTAAAGATATGGCGCAACCTTACGTTGGGGAAATCAGAATGTTTGGAGGAAACTTTGCTCCTGCA GGATGGATGTTCTGTGAAGG
Product: phage tail collar domain-containing protein
Products: NA
Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Microcystin Dependent; Microcystin-Dependent Protein-Like Protein; Phenylacrylic Acid Decarboxylase
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MATPYLGEIRIVSFNFAPKGWALCNGQFLPINQNQALFSLLGTMYGGNGQTTFALPNLRGRTPIHFGNGHTIGEKGGEEA HTLSISELPEHTHVLQAKTDTASTNIPSSSNFVANTAPNLVYSGQSQNFTSMNSGSLTSVGGNQPHLNMQPFLTLNFCIA LIGAFPSQN
Sequences:
>Translated_169_residues MATPYLGEIRIVSFNFAPKGWALCNGQFLPINQNQALFSLLGTMYGGNGQTTFALPNLRGRTPIHFGNGHTIGEKGGEEA HTLSISELPEHTHVLQAKTDTASTNIPSSSNFVANTAPNLVYSGQSQNFTSMNSGSLTSVGGNQPHLNMQPFLTLNFCIA LIGAFPSQN >Mature_168_residues ATPYLGEIRIVSFNFAPKGWALCNGQFLPINQNQALFSLLGTMYGGNGQTTFALPNLRGRTPIHFGNGHTIGEKGGEEAH TLSISELPEHTHVLQAKTDTASTNIPSSSNFVANTAPNLVYSGQSQNFTSMNSGSLTSVGGNQPHLNMQPFLTLNFCIAL IGAFPSQN
Specific function: Unknown
COG id: COG4675
COG function: function code S; Microcystin-dependent protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18039; Mature: 17908
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPYLGEIRIVSFNFAPKGWALCNGQFLPINQNQALFSLLGTMYGGNGQTTFALPNLRG CCCCCCCCEEEEEEECCCCCEEEECCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCC RTPIHFGNGHTIGEKGGEEAHTLSISELPEHTHVLQAKTDTASTNIPSSSNFVANTAPNL CCCEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCE VYSGQSQNFTSMNSGSLTSVGGNQPHLNMQPFLTLNFCIALIGAFPSQN EECCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure ATPYLGEIRIVSFNFAPKGWALCNGQFLPINQNQALFSLLGTMYGGNGQTTFALPNLRG CCCCCCCEEEEEEECCCCCEEEECCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCC RTPIHFGNGHTIGEKGGEEAHTLSISELPEHTHVLQAKTDTASTNIPSSSNFVANTAPNL CCCEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCE VYSGQSQNFTSMNSGSLTSVGGNQPHLNMQPFLTLNFCIALIGAFPSQN EECCCCCCCEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA