| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300432
Identifier: 146300432
GI number: 146300432
Start: 3190866
End: 3191531
Strand: Direct
Name: 146300432
Synonym: Fjoh_2681
Alternate gene names: NA
Gene position: 3190866-3191531 (Clockwise)
Preceding gene: 146300431
Following gene: 146300433
Centisome position: 52.34
GC content: 35.29
Gene sequence:
>666_bases ATGATCAATTTAGCACGAAGAAATTTTATAAAAAATGTCGGATTTGTTGGTGCAGCAACTCTTTTCTGCGGCTCTATGGC TGCTCAGAGCACTTTAGGAAATTTTTCTATCTTGGAAAACGATGAAGATAATATTCTAGCCCCATTCTCAAAAATAACTT TTTTTGACGCTTTCCTTTTAGATCAGTCTCTTGCGGACTGCTATAAAAAATCTATTTTAAATTGGGAAAAAATAGGATAC GCCTGCTCAGGAAATTATTGTTTCAGTTCTTCTGACGGACTTTTAAAAATGTTTCCCATGCATCTCCAAACTGAGGCTGC TGGAAAAGTGGATGATGTTTTGCTATGCTTTGGAAAAGATTCAGATGGCAGCTGGAAATCTGTAAGATCTTTATCTGGAT TTGATTTGGAGGCTATTACTGTAGCAATGCGTGATTTAAATATATATCGCAATAAGGTTAATTTATCCCATTATTTATTT CCTGCGCCAACGCAAAAATTAAATCCGTATGGATATGATACCAGAAAAGGCAGTATTTCTCTTCAAACTAACTTAGCGGC AGAGCACACCGTAACAAAAATCATCATAAAAGAAGGCACTTCTATTGTATACCAAAAAGAAATAATTTCAAAGCATAATT TTGCCGCTGATTCTTTTGTGGCCTAA
Upstream 100 bases:
>100_bases CGTGCTAATGTGATTTTTATTGTGTTATTTAACAAAAAATTATCATTTAATATTTCCTTTTATTATTTTTACTGGGACTT TAACAAAAAAGCAGGAAATT
Downstream 100 bases:
>100_bases TATAATTGCTTGAATAACTTAATAAATAGTCAAAATTATGGCAACACCTTATTTAGGAGAAATACGTATCGTGTCTTTTA ACTTTGCTCCGAAAGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MINLARRNFIKNVGFVGAATLFCGSMAAQSTLGNFSILENDEDNILAPFSKITFFDAFLLDQSLADCYKKSILNWEKIGY ACSGNYCFSSSDGLLKMFPMHLQTEAAGKVDDVLLCFGKDSDGSWKSVRSLSGFDLEAITVAMRDLNIYRNKVNLSHYLF PAPTQKLNPYGYDTRKGSISLQTNLAAEHTVTKIIIKEGTSIVYQKEIISKHNFAADSFVA
Sequences:
>Translated_221_residues MINLARRNFIKNVGFVGAATLFCGSMAAQSTLGNFSILENDEDNILAPFSKITFFDAFLLDQSLADCYKKSILNWEKIGY ACSGNYCFSSSDGLLKMFPMHLQTEAAGKVDDVLLCFGKDSDGSWKSVRSLSGFDLEAITVAMRDLNIYRNKVNLSHYLF PAPTQKLNPYGYDTRKGSISLQTNLAAEHTVTKIIIKEGTSIVYQKEIISKHNFAADSFVA >Mature_221_residues MINLARRNFIKNVGFVGAATLFCGSMAAQSTLGNFSILENDEDNILAPFSKITFFDAFLLDQSLADCYKKSILNWEKIGY ACSGNYCFSSSDGLLKMFPMHLQTEAAGKVDDVLLCFGKDSDGSWKSVRSLSGFDLEAITVAMRDLNIYRNKVNLSHYLF PAPTQKLNPYGYDTRKGSISLQTNLAAEHTVTKIIIKEGTSIVYQKEIISKHNFAADSFVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24489; Mature: 24489
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLARRNFIKNVGFVGAATLFCGSMAAQSTLGNFSILENDEDNILAPFSKITFFDAFLL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHH DQSLADCYKKSILNWEKIGYACSGNYCFSSSDGLLKMFPMHLQTEAAGKVDDVLLCFGKD HHHHHHHHHHHHCCHHHCCEEECCCEEEECCCCCEEECCHHHCCCCCCCCCEEEEEEECC SDGSWKSVRSLSGFDLEAITVAMRDLNIYRNKVNLSHYLFPAPTQKLNPYGYDTRKGSIS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCEECCCEEECCCCCCCCCCCCCCCCCCEEE LQTNLAAEHTVTKIIIKEGTSIVYQKEIISKHNFAADSFVA EEECCCHHHHHEEEEEECCCCEEEHHHHHHHCCCCCHHCCC >Mature Secondary Structure MINLARRNFIKNVGFVGAATLFCGSMAAQSTLGNFSILENDEDNILAPFSKITFFDAFLL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHH DQSLADCYKKSILNWEKIGYACSGNYCFSSSDGLLKMFPMHLQTEAAGKVDDVLLCFGKD HHHHHHHHHHHHCCHHHCCEEECCCEEEECCCCCEEECCHHHCCCCCCCCCEEEEEEECC SDGSWKSVRSLSGFDLEAITVAMRDLNIYRNKVNLSHYLFPAPTQKLNPYGYDTRKGSIS CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCEECCCEEECCCCCCCCCCCCCCCCCCEEE LQTNLAAEHTVTKIIIKEGTSIVYQKEIISKHNFAADSFVA EEECCCHHHHHEEEEEECCCCEEEHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA