| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300374
Identifier: 146300374
GI number: 146300374
Start: 3115012
End: 3115629
Strand: Direct
Name: 146300374
Synonym: Fjoh_2619
Alternate gene names: NA
Gene position: 3115012-3115629 (Clockwise)
Preceding gene: 146300369
Following gene: 146300375
Centisome position: 51.09
GC content: 37.22
Gene sequence:
>618_bases ATGAGTTTACGTAAGTATTTAACCAGCCGTGTGTTTTTTTTACAAGTGTTAGGTGCAGCTGCTATTATTGCTGTTTTAGG ATATTTGTTTATGCATTGGCTGACGTTTACAACTGATCACGGACACGAAATTGCGGTTCCGAATCTGGCCAGATTAACTG AAGAACAAGTTGAACAAAAACTAGACGAACTGGACTTAGATTATGTGCTTTTGGATAGTGTTGATTACAGAAGTGAATAC CCGAAATTTAGTGTTGTAGAGCAGGATCCGCTGCCGGGAACTAAAGTAAAAGTAGGAAGAAAAATATATATTAAAATTAA TTCGTCTGGATTCTCATCTGTTAAGATTCCTGATTTAATTGAAAAAACATATCGTGAAGCGGTTCCAACTTTAAAAGCTT TAGGACTTGAACCGGGAACGATTACGTATATTCCAAATCTTGGAAAAGATATGGTTCTTGAAATGCGTTACAAAGGCAGA AATTTAAAAGTAGGAGACCGTGTATTGAAAGCATCTAAAATTGATTTGGTTTTAGGTGACGGAAAAGCGAGTTATGTAGA TGACAGCCAGGCAGACAGTACGACAGTGCCTGTAGAAACCCCACAAGATGAACAATAA
Upstream 100 bases:
>100_bases TAAGCTTGCGTTCCTGAAAAAGACTTTCCTGTTTTAAACAAAATTATCATTTTTTTTGAAATGAAATACTTTATCTTTGC GTTCATCTAAAAATAAATTT
Downstream 100 bases:
>100_bases TATTGAAGAAAATTTAGATCTGGAAGACGAATTATTCGAACATTACAGATTTGAAGTCCCAAAAGGTCAGGCGTTTTTGC GTATTGACAAATATTTAATG
Product: PASTA domain-containing protein
Products: NA
Alternate protein names: Transmembrane PASTA-Domain Protein; Pasta Domain Containing Protein; Transmembrane PASTA-Domain-Containing Protein; Serine/Threonine Protein Kinase; PASTA Domain-Containing Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSLRKYLTSRVFFLQVLGAAAIIAVLGYLFMHWLTFTTDHGHEIAVPNLARLTEEQVEQKLDELDLDYVLLDSVDYRSEY PKFSVVEQDPLPGTKVKVGRKIYIKINSSGFSSVKIPDLIEKTYREAVPTLKALGLEPGTITYIPNLGKDMVLEMRYKGR NLKVGDRVLKASKIDLVLGDGKASYVDDSQADSTTVPVETPQDEQ
Sequences:
>Translated_205_residues MSLRKYLTSRVFFLQVLGAAAIIAVLGYLFMHWLTFTTDHGHEIAVPNLARLTEEQVEQKLDELDLDYVLLDSVDYRSEY PKFSVVEQDPLPGTKVKVGRKIYIKINSSGFSSVKIPDLIEKTYREAVPTLKALGLEPGTITYIPNLGKDMVLEMRYKGR NLKVGDRVLKASKIDLVLGDGKASYVDDSQADSTTVPVETPQDEQ >Mature_204_residues SLRKYLTSRVFFLQVLGAAAIIAVLGYLFMHWLTFTTDHGHEIAVPNLARLTEEQVEQKLDELDLDYVLLDSVDYRSEYP KFSVVEQDPLPGTKVKVGRKIYIKINSSGFSSVKIPDLIEKTYREAVPTLKALGLEPGTITYIPNLGKDMVLEMRYKGRN LKVGDRVLKASKIDLVLGDGKASYVDDSQADSTTVPVETPQDEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22983; Mature: 22852
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRKYLTSRVFFLQVLGAAAIIAVLGYLFMHWLTFTTDHGHEIAVPNLARLTEEQVEQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHH LDELDLDYVLLDSVDYRSEYPKFSVVEQDPLPGTKVKVGRKIYIKINSSGFSSVKIPDLI HHHCCCCEEEECCCCHHHCCCCEEEEECCCCCCCEEEECCEEEEEECCCCCCCCCCHHHH EKTYREAVPTLKALGLEPGTITYIPNLGKDMVLEMRYKGRNLKVGDRVLKASKIDLVLGD HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHEEEEEECCCCCCHHHHHHHHCEEEEEEEC GKASYVDDSQADSTTVPVETPQDEQ CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLRKYLTSRVFFLQVLGAAAIIAVLGYLFMHWLTFTTDHGHEIAVPNLARLTEEQVEQK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHH LDELDLDYVLLDSVDYRSEYPKFSVVEQDPLPGTKVKVGRKIYIKINSSGFSSVKIPDLI HHHCCCCEEEECCCCHHHCCCCEEEEECCCCCCCEEEECCEEEEEECCCCCCCCCCHHHH EKTYREAVPTLKALGLEPGTITYIPNLGKDMVLEMRYKGRNLKVGDRVLKASKIDLVLGD HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHEEEEEECCCCCCHHHHHHHHCEEEEEEEC GKASYVDDSQADSTTVPVETPQDEQ CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA