| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is dbpA [H]
Identifier: 146300368
GI number: 146300368
Start: 3109573
End: 3110934
Strand: Direct
Name: dbpA [H]
Synonym: Fjoh_2613
Alternate gene names: 146300368
Gene position: 3109573-3110934 (Clockwise)
Preceding gene: 146300365
Following gene: 146300369
Centisome position: 51.0
GC content: 35.61
Gene sequence:
>1362_bases ATGAATAAAAATCACCATTCCAACAATATACTTTCGAATTTAGGGATTCAGAGCCTGAACGAAATGCAGGAAACTGCTCA GGATGTAATTCTGAACGATAATAACGTTTTACTGCTTTCGCCAACGGGATCAGGAAAAACGCTGGCATTTTTGCTTCCGG TTTTAGAATTATTACAGCCTGAAATTCTTTCGGTTCAATGTTTAATTTTGGTTCCGTCGCGCGAATTGGGACTTCAGATT GAACAGGTTTGGAAGAAAATGGGAACGCAGTACAAAGTAAACATTTGTTACGGCGGACACTCTATTGATACTGAAATCAA AAATTTAAGCAATCCTCCGGCAGTTTTAATTGGAACGCCTGGAAGAATTGCCGATCATATTGACAGAGAAACTTTTAGAA CTGATAAAATTCAGACTTTAATTTTAGATGAATTTGACAAATCGCTTCAATTAGGGTTTCACGAGCAGATGTCCTTTATT ATTGGCAGATTACCAAAAGTAAATAAACGGGTTTTGGTTTCAGCAACTTCTGATATTGAAATTCCAAAATATACACGAGT GGTAAACCCAACGGTTTTGGATTTTATTCCGGAAGAAGAGGAGAAAGCAAATCTTTCGATGAAAATGATTGTTTCGCCAA GTAAAGATAAATTAGAAAGCTTGTTTAATTTAATCTGCTCTTTAAAATCAGAGTCGGCTATTATTTTTTGTAATCATCGT GATGCTGCAGAACGCATCAGTGACACTTTGAACGAAAAAGGCATTTATGCTACTTATTATCATGGCGGAATGGATCAGGA CGAACGTGAACGTGCTTTGATTCAGTTTAGAAACGGAAGCATCAGCTACCTCATTACAACAGATCTTGCCGCACGCGGAC TGGATATTCCTGAAATGAAACATGTTATTCATTATCATTTACCTTTAAAAGAAGACGAGTTTACGCATCGTAACGGACGT ACAGCACGTATGCAGGCAACAGGAACGGCTTATATTATTGTTCACGAAAGTGAGAAAAAACTAGATTATATCGATTATGA TATGCAGGTTTTAGACGTTAAAAATATAACGTCGCTGCCTAAACCTCCGCAATTTCAAACTATATACATTAGCGGTGGTA AAAAGACAAAATTAAATAAGTTTGATATCGTAGGTTTCTTTTCTCAAAAAGGGAAATTAGAAAAAGACGATTTAGGACTT ATCGAAGTAAAAGATTTTGTTTCGTTTGCAGCAGTAAAATTCGGTAAGGTAAAAGATCTGCTGAAAGCGGTAAAAGATGA AAAAATGAAGGGTAAAAAATTTAAAATTGAAGTTGCCCGCAACGTTATAAAGAAAGAAGAAGATAAAAATAAGAAATTTT AG
Upstream 100 bases:
>100_bases AAACCTAGTATATATAATTCCTTGCGCTCTTTGCGGTTAAATAAACTTGAAACCTGAAACAAGAAAAACTTGAAACAACT TTTTTGACTACTTTTGCAAA
Downstream 100 bases:
>100_bases CCTTTTTGAGATAGCTGTACAGAGTTATGGTTTGGTTTATGTGCTTGTAAATCAGTTTTTTATAATTTACTGAAGAAGAT TAACAATTTTGTGTTAAAAA
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MNKNHHSNNILSNLGIQSLNEMQETAQDVILNDNNVLLLSPTGSGKTLAFLLPVLELLQPEILSVQCLILVPSRELGLQI EQVWKKMGTQYKVNICYGGHSIDTEIKNLSNPPAVLIGTPGRIADHIDRETFRTDKIQTLILDEFDKSLQLGFHEQMSFI IGRLPKVNKRVLVSATSDIEIPKYTRVVNPTVLDFIPEEEEKANLSMKMIVSPSKDKLESLFNLICSLKSESAIIFCNHR DAAERISDTLNEKGIYATYYHGGMDQDERERALIQFRNGSISYLITTDLAARGLDIPEMKHVIHYHLPLKEDEFTHRNGR TARMQATGTAYIIVHESEKKLDYIDYDMQVLDVKNITSLPKPPQFQTIYISGGKKTKLNKFDIVGFFSQKGKLEKDDLGL IEVKDFVSFAAVKFGKVKDLLKAVKDEKMKGKKFKIEVARNVIKKEEDKNKKF
Sequences:
>Translated_453_residues MNKNHHSNNILSNLGIQSLNEMQETAQDVILNDNNVLLLSPTGSGKTLAFLLPVLELLQPEILSVQCLILVPSRELGLQI EQVWKKMGTQYKVNICYGGHSIDTEIKNLSNPPAVLIGTPGRIADHIDRETFRTDKIQTLILDEFDKSLQLGFHEQMSFI IGRLPKVNKRVLVSATSDIEIPKYTRVVNPTVLDFIPEEEEKANLSMKMIVSPSKDKLESLFNLICSLKSESAIIFCNHR DAAERISDTLNEKGIYATYYHGGMDQDERERALIQFRNGSISYLITTDLAARGLDIPEMKHVIHYHLPLKEDEFTHRNGR TARMQATGTAYIIVHESEKKLDYIDYDMQVLDVKNITSLPKPPQFQTIYISGGKKTKLNKFDIVGFFSQKGKLEKDDLGL IEVKDFVSFAAVKFGKVKDLLKAVKDEKMKGKKFKIEVARNVIKKEEDKNKKF >Mature_453_residues MNKNHHSNNILSNLGIQSLNEMQETAQDVILNDNNVLLLSPTGSGKTLAFLLPVLELLQPEILSVQCLILVPSRELGLQI EQVWKKMGTQYKVNICYGGHSIDTEIKNLSNPPAVLIGTPGRIADHIDRETFRTDKIQTLILDEFDKSLQLGFHEQMSFI IGRLPKVNKRVLVSATSDIEIPKYTRVVNPTVLDFIPEEEEKANLSMKMIVSPSKDKLESLFNLICSLKSESAIIFCNHR DAAERISDTLNEKGIYATYYHGGMDQDERERALIQFRNGSISYLITTDLAARGLDIPEMKHVIHYHLPLKEDEFTHRNGR TARMQATGTAYIIVHESEKKLDYIDYDMQVLDVKNITSLPKPPQFQTIYISGGKKTKLNKFDIVGFFSQKGKLEKDDLGL IEVKDFVSFAAVKFGKVKDLLKAVKDEKMKGKKFKIEVARNVIKKEEDKNKKF
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=324, Percent_Identity=33.9506172839506, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI164664518, Length=323, Percent_Identity=32.1981424148607, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=30.2521008403361, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI51094101, Length=319, Percent_Identity=32.6018808777429, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI164419743, Length=319, Percent_Identity=32.6018808777429, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI20149629, Length=334, Percent_Identity=31.1377245508982, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI169881239, Length=395, Percent_Identity=30.126582278481, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI13514809, Length=395, Percent_Identity=30.126582278481, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI301171475, Length=349, Percent_Identity=32.378223495702, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI87196351, Length=349, Percent_Identity=32.378223495702, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI262118318, Length=346, Percent_Identity=32.0809248554913, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI301171467, Length=349, Percent_Identity=32.378223495702, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=32.0113314447592, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI262231852, Length=346, Percent_Identity=32.0809248554913, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI216548263, Length=346, Percent_Identity=32.0809248554913, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI13518015, Length=346, Percent_Identity=32.0809248554913, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI83700235, Length=333, Percent_Identity=30.9309309309309, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI4503529, Length=335, Percent_Identity=30.4477611940298, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI31542656, Length=334, Percent_Identity=32.0359281437126, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI13514831, Length=338, Percent_Identity=32.2485207100592, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI45446747, Length=319, Percent_Identity=31.6614420062696, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI45446743, Length=319, Percent_Identity=31.6614420062696, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4758138, Length=345, Percent_Identity=31.5942028985507, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=31.25, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=31.25, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI222352149, Length=331, Percent_Identity=30.8157099697885, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=29.4797687861272, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI21071032, Length=380, Percent_Identity=27.8947368421053, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI8922886, Length=335, Percent_Identity=30.4477611940298, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI62241022, Length=335, Percent_Identity=30.4477611940298, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI13129006, Length=359, Percent_Identity=29.5264623955432, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI6005743, Length=335, Percent_Identity=30.4477611940298, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI62241024, Length=312, Percent_Identity=31.0897435897436, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI50659095, Length=350, Percent_Identity=29.1428571428571, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=28.6501377410468, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI41327773, Length=427, Percent_Identity=26.6978922716628, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=28.641975308642, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI188035877, Length=368, Percent_Identity=27.445652173913, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI164419732, Length=343, Percent_Identity=29.7376093294461, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI256223453, Length=346, Percent_Identity=29.1907514450867, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI41327771, Length=364, Percent_Identity=25, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI21040371, Length=332, Percent_Identity=28.3132530120482, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI4758112, Length=356, Percent_Identity=28.6516853932584, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI18375623, Length=356, Percent_Identity=28.6516853932584, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI41327776, Length=334, Percent_Identity=27.2455089820359, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI38569505, Length=348, Percent_Identity=28.448275862069, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI38569503, Length=348, Percent_Identity=28.448275862069, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI9966805, Length=302, Percent_Identity=27.4834437086093, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI9506931, Length=421, Percent_Identity=24.4655581947743, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI154759257, Length=360, Percent_Identity=23.8888888888889, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=25.1948051948052, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI20336298, Length=347, Percent_Identity=26.8011527377522, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4826686, Length=341, Percent_Identity=24.633431085044, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1787605, Length=443, Percent_Identity=29.5711060948081, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI87082221, Length=336, Percent_Identity=32.4404761904762, Blast_Score=194, Evalue=8e-51, Organism=Escherichia coli, GI1787016, Length=348, Percent_Identity=32.183908045977, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=30.4812834224599, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1788930, Length=317, Percent_Identity=30.5993690851735, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507121, Length=332, Percent_Identity=33.1325301204819, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71995724, Length=332, Percent_Identity=33.1325301204819, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71987143, Length=313, Percent_Identity=32.5878594249201, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17555296, Length=328, Percent_Identity=32.3170731707317, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17552114, Length=352, Percent_Identity=29.8295454545455, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71999646, Length=342, Percent_Identity=28.3625730994152, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI71999644, Length=342, Percent_Identity=28.3625730994152, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17505370, Length=349, Percent_Identity=30.6590257879656, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=29.973474801061, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=30.421686746988, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI86570094, Length=418, Percent_Identity=28.7081339712919, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17509811, Length=333, Percent_Identity=29.4294294294294, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=29.9212598425197, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=29.9212598425197, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=29.9212598425197, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=28.1984334203655, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI115532546, Length=347, Percent_Identity=29.1066282420749, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17537549, Length=343, Percent_Identity=28.8629737609329, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=32.7731092436975, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17507877, Length=367, Percent_Identity=29.700272479564, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71995718, Length=341, Percent_Identity=30.4985337243402, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI32565321, Length=388, Percent_Identity=27.0618556701031, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17507879, Length=367, Percent_Identity=30.2452316076294, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=27.4336283185841, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI193206561, Length=335, Percent_Identity=27.1641791044776, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17536099, Length=390, Percent_Identity=28.4615384615385, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17536101, Length=390, Percent_Identity=28.4615384615385, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17556951, Length=348, Percent_Identity=29.0229885057471, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=28.6821705426357, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17507881, Length=347, Percent_Identity=28.5302593659942, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17553716, Length=320, Percent_Identity=27.5, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71990816, Length=342, Percent_Identity=27.7777777777778, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71982858, Length=375, Percent_Identity=25.3333333333333, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17508543, Length=359, Percent_Identity=27.2980501392758, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71997889, Length=358, Percent_Identity=26.2569832402235, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI32564046, Length=422, Percent_Identity=25.8293838862559, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI193208216, Length=334, Percent_Identity=26.6467065868263, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25148203, Length=387, Percent_Identity=23.5142118863049, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25148291, Length=356, Percent_Identity=21.9101123595506, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17507641, Length=161, Percent_Identity=31.6770186335404, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71987152, Length=91, Percent_Identity=38.4615384615385, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71982862, Length=184, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987993, Length=336, Percent_Identity=21.7261904761905, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71987997, Length=336, Percent_Identity=22.0238095238095, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323021, Length=343, Percent_Identity=30.6122448979592, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320224, Length=324, Percent_Identity=32.4074074074074, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=29.483282674772, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6324778, Length=339, Percent_Identity=31.858407079646, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6322912, Length=307, Percent_Identity=32.8990228013029, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6322323, Length=307, Percent_Identity=32.8990228013029, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321856, Length=335, Percent_Identity=31.6417910447761, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=28.9340101522843, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6322427, Length=341, Percent_Identity=31.9648093841642, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6325138, Length=357, Percent_Identity=30.2521008403361, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6324217, Length=341, Percent_Identity=30.2052785923754, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321360, Length=335, Percent_Identity=31.9402985074627, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6323947, Length=326, Percent_Identity=30.0613496932515, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321963, Length=346, Percent_Identity=30.635838150289, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=29.2383292383292, Blast_Score=142, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6320449, Length=329, Percent_Identity=31.6109422492401, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324620, Length=337, Percent_Identity=31.7507418397626, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321111, Length=389, Percent_Identity=29.5629820051414, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319714, Length=423, Percent_Identity=29.0780141843972, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=363, Percent_Identity=26.9972451790634, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320119, Length=336, Percent_Identity=27.0833333333333, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6320400, Length=360, Percent_Identity=28.3333333333333, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321267, Length=328, Percent_Identity=28.0487804878049, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6322876, Length=400, Percent_Identity=25.25, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321374, Length=379, Percent_Identity=25.065963060686, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323306, Length=401, Percent_Identity=25.6857855361596, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI24645031, Length=321, Percent_Identity=31.7757009345794, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI21356161, Length=332, Percent_Identity=33.7349397590361, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24585582, Length=322, Percent_Identity=31.6770186335404, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI28575014, Length=333, Percent_Identity=31.2312312312312, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24582080, Length=307, Percent_Identity=31.5960912052117, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24582078, Length=307, Percent_Identity=31.5960912052117, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI17136248, Length=307, Percent_Identity=31.5960912052117, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24582075, Length=307, Percent_Identity=31.5960912052117, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI17136814, Length=335, Percent_Identity=32.5373134328358, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=31.8559556786704, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI21355075, Length=336, Percent_Identity=31.25, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24662330, Length=332, Percent_Identity=31.6265060240964, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=29.2134831460674, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=29.2134831460674, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24584399, Length=330, Percent_Identity=31.5151515151515, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=29.512893982808, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=29.512893982808, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI17985987, Length=350, Percent_Identity=30.8571428571429, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI18857967, Length=339, Percent_Identity=31.858407079646, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=27.5280898876405, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI18859659, Length=430, Percent_Identity=28.1395348837209, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI28571338, Length=430, Percent_Identity=28.1395348837209, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI24644487, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI45551833, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24644485, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24644483, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI281361218, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24644481, Length=343, Percent_Identity=28.5714285714286, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=29.9450549450549, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24644479, Length=343, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=26.0053619302949, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI24584994, Length=375, Percent_Identity=26.4, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24642822, Length=339, Percent_Identity=29.4985250737463, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI19920478, Length=364, Percent_Identity=27.4725274725275, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI17647335, Length=362, Percent_Identity=26.2430939226519, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI281365720, Length=299, Percent_Identity=30.1003344481605, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=26.8292682926829, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=26.8292682926829, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=26.8292682926829, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI20130173, Length=432, Percent_Identity=24.3055555555556, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24643725, Length=372, Percent_Identity=26.6129032258064, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24666101, Length=325, Percent_Identity=26.7692307692308, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17136666, Length=383, Percent_Identity=25.3263707571802, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24646066, Length=347, Percent_Identity=21.9020172910663, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51423; Mature: 51423
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNHHSNNILSNLGIQSLNEMQETAQDVILNDNNVLLLSPTGSGKTLAFLLPVLELLQP CCCCCCCCHHHHHCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHHCC EILSVQCLILVPSRELGLQIEQVWKKMGTQYKVNICYGGHSIDTEIKNLSNPPAVLIGTP CCEEEEEEEEECCHHHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCCCEEEEECC GRIADHIDRETFRTDKIQTLILDEFDKSLQLGFHEQMSFIIGRLPKVNKRVLVSATSDIE CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCC IPKYTRVVNPTVLDFIPEEEEKANLSMKMIVSPSKDKLESLFNLICSLKSESAIIFCNHR CCCHHEECCCHHEECCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCC DAAERISDTLNEKGIYATYYHGGMDQDERERALIQFRNGSISYLITTDLAARGLDIPEMK CHHHHHHHHHHCCCCEEEEECCCCCCCHHHCEEEEECCCCEEEEEEECHHHCCCCCHHHH HVIHYHLPLKEDEFTHRNGRTARMQATGTAYIIVHESEKKLDYIDYDMQVLDVKNITSLP HHEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCEECCCEEEEEEHHHCCCC KPPQFQTIYISGGKKTKLNKFDIVGFFSQKGKLEKDDLGLIEVKDFVSFAAVKFGKVKDL CCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH LKAVKDEKMKGKKFKIEVARNVIKKEEDKNKKF HHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNKNHHSNNILSNLGIQSLNEMQETAQDVILNDNNVLLLSPTGSGKTLAFLLPVLELLQP CCCCCCCCHHHHHCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHHCC EILSVQCLILVPSRELGLQIEQVWKKMGTQYKVNICYGGHSIDTEIKNLSNPPAVLIGTP CCEEEEEEEEECCHHHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCCCCEEEEECC GRIADHIDRETFRTDKIQTLILDEFDKSLQLGFHEQMSFIIGRLPKVNKRVLVSATSDIE CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCC IPKYTRVVNPTVLDFIPEEEEKANLSMKMIVSPSKDKLESLFNLICSLKSESAIIFCNHR CCCHHEECCCHHEECCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCC DAAERISDTLNEKGIYATYYHGGMDQDERERALIQFRNGSISYLITTDLAARGLDIPEMK CHHHHHHHHHHCCCCEEEEECCCCCCCHHHCEEEEECCCCEEEEEEECHHHCCCCCHHHH HVIHYHLPLKEDEFTHRNGRTARMQATGTAYIIVHESEKKLDYIDYDMQVLDVKNITSLP HHEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCEECCCEEEEEEHHHCCCC KPPQFQTIYISGGKKTKLNKFDIVGFFSQKGKLEKDDLGLIEVKDFVSFAAVKFGKVKDL CCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH LKAVKDEKMKGKKFKIEVARNVIKKEEDKNKKF HHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]