| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300365
Identifier: 146300365
GI number: 146300365
Start: 3105201
End: 3105995
Strand: Direct
Name: 146300365
Synonym: Fjoh_2610
Alternate gene names: NA
Gene position: 3105201-3105995 (Clockwise)
Preceding gene: 146300364
Following gene: 146300368
Centisome position: 50.93
GC content: 24.03
Gene sequence:
>795_bases ATGAAAAAAATAGAAAATTTAATTTTTTTAATTGTATTGATAGTGTTGTGTTCTTGTAAACACAAAGAAGAATATCAATA CAAAAGCACTATGGTGAAGAAAGATTCTCTACTATTAATTAAAGATACAGCTATATATGGAGAATCATCTGAGGGAACAG AAGCTAAACTATTTAAAAAATTATACAGTTGCGATTCTATAATGAATATAGAAACTTTTGGAGAAATGGGCAATTCAAAA TACATATTTAGATTTAATAAAAAAATATTATATGTAAGGCATATTACAAATCATTACCAAGAGCCTATTTATATGAATTC AACTCCCAAAATAATAAAAAAGGATACAGTAATATTAAACAATTCTAACAGAAATAAGTTTACAGCTCTTTTTTACGAAT ATAAAAGCTATTTTATTAAATCAAAAAACAAAAAAGATAAGAATTTTTTAAATCAAAAGTGGTATGGAACATATTTATTT ACCATGAATGAGGATAGTGATGATTGGCGAGACTTACATGATATTTCCATTACCATAAATAAAGATTCTTTAATTTATTC CGCTAAAGGATTTCAGTTATATCAATTGTATAACCTCTCTGTAGTTGAAAAAAATGACACATTAAGATTAACATTTGAAA AAGATTTAAATAATACAAATAGTTGGGCGTTGAAAAAAACTAAAAATTTTGGAATAATTACTTTTAACAATGGGTGCTAT AAATGGGTATGTCCATATATTGATATTAGCTTTAATAATGGAAAAAATAGTACTTACATTTTAAAGAAAGAATAA
Upstream 100 bases:
>100_bases CCTCACTTTGAAATGACATTTGGAAAAACAACTCAAGATTTAAGAGAATTGCTTGAAATTCACAATGATTATACTAAGAT TCCTTTGTAATTAAAAATTT
Downstream 100 bases:
>100_bases AAAAGGATCTTCTAAAAAAGAAATCAGAGTACTTACCTTTATTTTTTATTATGAAGAATAGATCTTCCAAAAATTGAGGG TCTTAGTTTTAGCGAAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKKIENLIFLIVLIVLCSCKHKEEYQYKSTMVKKDSLLLIKDTAIYGESSEGTEAKLFKKLYSCDSIMNIETFGEMGNSK YIFRFNKKILYVRHITNHYQEPIYMNSTPKIIKKDTVILNNSNRNKFTALFYEYKSYFIKSKNKKDKNFLNQKWYGTYLF TMNEDSDDWRDLHDISITINKDSLIYSAKGFQLYQLYNLSVVEKNDTLRLTFEKDLNNTNSWALKKTKNFGIITFNNGCY KWVCPYIDISFNNGKNSTYILKKE
Sequences:
>Translated_264_residues MKKIENLIFLIVLIVLCSCKHKEEYQYKSTMVKKDSLLLIKDTAIYGESSEGTEAKLFKKLYSCDSIMNIETFGEMGNSK YIFRFNKKILYVRHITNHYQEPIYMNSTPKIIKKDTVILNNSNRNKFTALFYEYKSYFIKSKNKKDKNFLNQKWYGTYLF TMNEDSDDWRDLHDISITINKDSLIYSAKGFQLYQLYNLSVVEKNDTLRLTFEKDLNNTNSWALKKTKNFGIITFNNGCY KWVCPYIDISFNNGKNSTYILKKE >Mature_264_residues MKKIENLIFLIVLIVLCSCKHKEEYQYKSTMVKKDSLLLIKDTAIYGESSEGTEAKLFKKLYSCDSIMNIETFGEMGNSK YIFRFNKKILYVRHITNHYQEPIYMNSTPKIIKKDTVILNNSNRNKFTALFYEYKSYFIKSKNKKDKNFLNQKWYGTYLF TMNEDSDDWRDLHDISITINKDSLIYSAKGFQLYQLYNLSVVEKNDTLRLTFEKDLNNTNSWALKKTKNFGIITFNNGCY KWVCPYIDISFNNGKNSTYILKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31302; Mature: 31302
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIENLIFLIVLIVLCSCKHKEEYQYKSTMVKKDSLLLIKDTAIYGESSEGTEAKLFKK CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCEEEEEEEEEECCCCCCHHHHHHHH LYSCDSIMNIETFGEMGNSKYIFRFNKKILYVRHITNHYQEPIYMNSTPKIIKKDTVILN HHCCCCEEEHHHHHCCCCCEEEEEECCEEEEEEEHHHHHCCCEEECCCCCEEECCEEEEE NSNRNKFTALFYEYKSYFIKSKNKKDKNFLNQKWYGTYLFTMNEDSDDWRDLHDISITIN CCCCCEEEEEEEEHHHHHEECCCCCCHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEEEE KDSLIYSAKGFQLYQLYNLSVVEKNDTLRLTFEKDLNNTNSWALKKTKNFGIITFNNGCY CCEEEEEECCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCEE KWVCPYIDISFNNGKNSTYILKKE EEEECEEEEEEECCCCCEEEEEEC >Mature Secondary Structure MKKIENLIFLIVLIVLCSCKHKEEYQYKSTMVKKDSLLLIKDTAIYGESSEGTEAKLFKK CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCEEEEEEEEEECCCCCCHHHHHHHH LYSCDSIMNIETFGEMGNSKYIFRFNKKILYVRHITNHYQEPIYMNSTPKIIKKDTVILN HHCCCCEEEHHHHHCCCCCEEEEEECCEEEEEEEHHHHHCCCEEECCCCCEEECCEEEEE NSNRNKFTALFYEYKSYFIKSKNKKDKNFLNQKWYGTYLFTMNEDSDDWRDLHDISITIN CCCCCEEEEEEEEHHHHHEECCCCCCHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEEEE KDSLIYSAKGFQLYQLYNLSVVEKNDTLRLTFEKDLNNTNSWALKKTKNFGIITFNNGCY CCEEEEEECCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCEE KWVCPYIDISFNNGKNSTYILKKE EEEECEEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA