| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300364
Identifier: 146300364
GI number: 146300364
Start: 3104060
End: 3104911
Strand: Direct
Name: 146300364
Synonym: Fjoh_2609
Alternate gene names: NA
Gene position: 3104060-3104911 (Clockwise)
Preceding gene: 146300363
Following gene: 146300365
Centisome position: 50.91
GC content: 23.47
Gene sequence:
>852_bases ATGAGATTTTTTAAAATTATAACAATCTGTTTTTTGGGATATTTGATAATTTCTTGTAAAAGAGACAATAGTAAGAAAAA TGAAATTACTAAAGAAATAAAAAGTAAATCTGTTACAGATACTTTAATAACTGACATTGATTTAAAAAAAATAGGAAAAG AAATAGCAGGAAGAGAAAAAAAGGACATGATAGACAAATATTATTATGCTATAAACAGAGAAGTTGAAAGACCTGAAATG GCAGATTCATTTATGTCAAATATTGATTCATTGTTTAAAATTTATCATTATAAAGTATTTGTTATAAATAGTATAAAAAT TAATTCTTATGTTGTTAAAATACTTTTTGAAGATGCTCAATATATATCAATACTTTTAATACTGAATAAAGAAAATTATC CCAACAATTGTTTAGTAGTTTATGAAAATTTAAAATCAGAAGTAAACTATAATTGTTATTCTAAAATTACGAACAATATA ATAACTATTAATAAAGTTGGCAATTCAAAAAAAACAATCGAAAAGTATATTATAGAACAGAATAATTTTTTAGAATATTT TGAAAATTCACAAATTGATATTCCAAAATGGGGACAAGAAGAAATTATTTATACAAAAGACGGACAAGATTCTACATATG AATATCAGTATATATTGGAAGGGAAAATAAAAAATCACCTTAAGCATGGTGTTTGGGATGAGAAGAAATACATTCTCCAA TACAACAAATCTGTTTGGCTTCATGGTGAATATATAAATGGCTTAAGAAATGGTGAATGGATTTATGATGAAGGAGATCC ATTTAGTAAAACGGAAGTCTATGATATGGGAAAACTAATAAAAATATATTAA
Upstream 100 bases:
>100_bases GGAAGTATAATAAAAAGCTATTACATCATTCAATACATTATGAAGATCACCATCATCACTTACACATACAATCTTTTGAA CCTAATTTAAAAAAAATAAA
Downstream 100 bases:
>100_bases TTAAAAACTTCCTCCGCTACCTTAGCGCTGGCAGGCTGATCATTTTCTCATCTAGTGTGAGCGTCACGCTTGTAATAATT AGTTTTGAATAGATTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRFFKIITICFLGYLIISCKRDNSKKNEITKEIKSKSVTDTLITDIDLKKIGKEIAGREKKDMIDKYYYAINREVERPEM ADSFMSNIDSLFKIYHYKVFVINSIKINSYVVKILFEDAQYISILLILNKENYPNNCLVVYENLKSEVNYNCYSKITNNI ITINKVGNSKKTIEKYIIEQNNFLEYFENSQIDIPKWGQEEIIYTKDGQDSTYEYQYILEGKIKNHLKHGVWDEKKYILQ YNKSVWLHGEYINGLRNGEWIYDEGDPFSKTEVYDMGKLIKIY
Sequences:
>Translated_283_residues MRFFKIITICFLGYLIISCKRDNSKKNEITKEIKSKSVTDTLITDIDLKKIGKEIAGREKKDMIDKYYYAINREVERPEM ADSFMSNIDSLFKIYHYKVFVINSIKINSYVVKILFEDAQYISILLILNKENYPNNCLVVYENLKSEVNYNCYSKITNNI ITINKVGNSKKTIEKYIIEQNNFLEYFENSQIDIPKWGQEEIIYTKDGQDSTYEYQYILEGKIKNHLKHGVWDEKKYILQ YNKSVWLHGEYINGLRNGEWIYDEGDPFSKTEVYDMGKLIKIY >Mature_283_residues MRFFKIITICFLGYLIISCKRDNSKKNEITKEIKSKSVTDTLITDIDLKKIGKEIAGREKKDMIDKYYYAINREVERPEM ADSFMSNIDSLFKIYHYKVFVINSIKINSYVVKILFEDAQYISILLILNKENYPNNCLVVYENLKSEVNYNCYSKITNNI ITINKVGNSKKTIEKYIIEQNNFLEYFENSQIDIPKWGQEEIIYTKDGQDSTYEYQYILEGKIKNHLKHGVWDEKKYILQ YNKSVWLHGEYINGLRNGEWIYDEGDPFSKTEVYDMGKLIKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33626; Mature: 33626
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFKIITICFLGYLIISCKRDNSKKNEITKEIKSKSVTDTLITDIDLKKIGKEIAGREK CHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCH KDMIDKYYYAINREVERPEMADSFMSNIDSLFKIYHYKVFVINSIKINSYVVKILFEDAQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCC YISILLILNKENYPNNCLVVYENLKSEVNYNCYSKITNNIITINKVGNSKKTIEKYIIEQ EEEEEEEEECCCCCCCEEEEEECHHCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCC NNFLEYFENSQIDIPKWGQEEIIYTKDGQDSTYEYQYILEGKIKNHLKHGVWDEKKYILQ CCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCCCEEEE YNKSVWLHGEYINGLRNGEWIYDEGDPFSKTEVYDMGKLIKIY ECCEEEEEHHHHCCCCCCCEEECCCCCCCCCHHHHCCCEEEEC >Mature Secondary Structure MRFFKIITICFLGYLIISCKRDNSKKNEITKEIKSKSVTDTLITDIDLKKIGKEIAGREK CHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCH KDMIDKYYYAINREVERPEMADSFMSNIDSLFKIYHYKVFVINSIKINSYVVKILFEDAQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCC YISILLILNKENYPNNCLVVYENLKSEVNYNCYSKITNNIITINKVGNSKKTIEKYIIEQ EEEEEEEEECCCCCCCEEEEEECHHCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHCC NNFLEYFENSQIDIPKWGQEEIIYTKDGQDSTYEYQYILEGKIKNHLKHGVWDEKKYILQ CCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHHHHHCCCCCCCCEEEE YNKSVWLHGEYINGLRNGEWIYDEGDPFSKTEVYDMGKLIKIY ECCEEEEEHHHHCCCCCCCEEECCCCCCCCCHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA