| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300325
Identifier: 146300325
GI number: 146300325
Start: 3055464
End: 3055988
Strand: Reverse
Name: 146300325
Synonym: Fjoh_2570
Alternate gene names: NA
Gene position: 3055988-3055464 (Counterclockwise)
Preceding gene: 146300328
Following gene: 146300324
Centisome position: 50.12
GC content: 27.62
Gene sequence:
>525_bases ATGGCAGTTTGGCAATATCTTTTAATCGTAGTTCCAAAAGATTCAATCGGTAATAATTACGAATGCATTTTTAAAAATAA CAAAACAGAATTTTTACCAGAGACTGATGTTTTTTGGAAAAATTTTAATGGCAACATTCCTTCAATCATTTCCGGACTTG ATCAAATTATCCCTAAAGCGAATTGGGGAAATGAAACTTATTTAAACTGGAAAGGAAATGGACAAAATGAAGAAGATAAT GATGCATGCATTTGTTTAAGTGATGATAAAACAAAAATCGAAGAATTTCAATTTAGAATTGATTTGAGGAAACCATCCAA TATTACCAATATTCTTCAATCAATATTGAATCTTTGTGAGAAGCACAATCTTGTATTAATTGACTTAAAAGGAAAAATTT TTCAACCAAAATTAGAAGATGTTTTAGGAAGTATTAAAGCCTCAAATGCAACACGATTTTTAAATGATCCAATACATTTT TTTGAAGATTTAAGTAAAAATAATTCAGATGAAACAAGAACATAA
Upstream 100 bases:
>100_bases ATTTCTGTAAAAAACAAAACTGTTTTTGTAAGATACTATTTTCATTATTTCTATATTAGCCAGCTCAACAGGAATTACCA ATTATTAATCTTATTGTAAA
Downstream 100 bases:
>100_bases ACTTATCCTTGAATTACTAGAATCTTATTTAGAAAAGAATCCAAGTCAGAGATTTGGACAGGCATTGTTCAATCTTAATA TTAATGAATTTCAGAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAVWQYLLIVVPKDSIGNNYECIFKNNKTEFLPETDVFWKNFNGNIPSIISGLDQIIPKANWGNETYLNWKGNGQNEEDN DACICLSDDKTKIEEFQFRIDLRKPSNITNILQSILNLCEKHNLVLIDLKGKIFQPKLEDVLGSIKASNATRFLNDPIHF FEDLSKNNSDETRT
Sequences:
>Translated_174_residues MAVWQYLLIVVPKDSIGNNYECIFKNNKTEFLPETDVFWKNFNGNIPSIISGLDQIIPKANWGNETYLNWKGNGQNEEDN DACICLSDDKTKIEEFQFRIDLRKPSNITNILQSILNLCEKHNLVLIDLKGKIFQPKLEDVLGSIKASNATRFLNDPIHF FEDLSKNNSDETRT >Mature_173_residues AVWQYLLIVVPKDSIGNNYECIFKNNKTEFLPETDVFWKNFNGNIPSIISGLDQIIPKANWGNETYLNWKGNGQNEEDND ACICLSDDKTKIEEFQFRIDLRKPSNITNILQSILNLCEKHNLVLIDLKGKIFQPKLEDVLGSIKASNATRFLNDPIHFF EDLSKNNSDETRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20027; Mature: 19896
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVWQYLLIVVPKDSIGNNYECIFKNNKTEFLPETDVFWKNFNGNIPSIISGLDQIIPKA CCHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCC NWGNETYLNWKGNGQNEEDNDACICLSDDKTKIEEFQFRIDLRKPSNITNILQSILNLCE CCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHH KHNLVLIDLKGKIFQPKLEDVLGSIKASNATRFLNDPIHFFEDLSKNNSDETRT HCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AVWQYLLIVVPKDSIGNNYECIFKNNKTEFLPETDVFWKNFNGNIPSIISGLDQIIPKA CHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCC NWGNETYLNWKGNGQNEEDNDACICLSDDKTKIEEFQFRIDLRKPSNITNILQSILNLCE CCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHH KHNLVLIDLKGKIFQPKLEDVLGSIKASNATRFLNDPIHFFEDLSKNNSDETRT HCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA