| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300322
Identifier: 146300322
GI number: 146300322
Start: 3053632
End: 3054201
Strand: Direct
Name: 146300322
Synonym: Fjoh_2567
Alternate gene names: NA
Gene position: 3053632-3054201 (Clockwise)
Preceding gene: 146300320
Following gene: 146300326
Centisome position: 50.09
GC content: 34.21
Gene sequence:
>570_bases ATGTACAACCTACTACGAAAAAACATTGAAAGGAAAGTTCCGCTCACTGATGAAGAATGGAACATTATTGTTTCAAAAGC AGAACTTGTAAAATTAAAGAAAAATCAGTTCTTGCAGATTCAGGATTCTCATAACAGTTATGAAGGATTCATTTTAAAAG GATCGTTTAAAACCTACATCGTAAACGAAAACGGAACAGAAACCGTAATTTTCTTTTCCTTTGAAGACGAATGGATGTGT GACCTGGAAAGTTTTTACCATCAAAAACCAACGACCTACAACATTAAAGCCATTGAAGACAGCGAAATTTTGGTTATCAG TAAAATCAAAAAAGCGCAGCTGTTTCAAGAAATTCCAAAAATTATGCAGTTTCACGTTCTTATGATTGAACGTGCTAATG TTGCCATCCAGCAAAGACTATTGGATGTTCTTAATAAAACTTCGAAACAGCGTTATCTTGATTTTAAAGAGCGTTATCCG CAAAAGGTAAGTTCGATAAACAATAAGAATTTGTCTTCGTATTTGGGAGTTTCTCACGAGTTTCTTTCGAAGATAAAAAG GAGGTGCTAA
Upstream 100 bases:
>100_bases ATGCATGAATAGTGTATTTTTACGTAATCGATTACATTATTTAAGCCCCTAATTAATAATGAATTGAGTAACCACTTTTA TTCCTTAAACAAAACACAAA
Downstream 100 bases:
>100_bases GATGTTAAGGTTCAGAGTAACAAAGTGACAAAGGTTTTCTTTAGAGACGCACTGTAGTGCGTCTCACTTTACATGAAAAT CTCACAATCCCGATAGCTAT
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP QKVSSINNKNLSSYLGVSHEFLSKIKRRC
Sequences:
>Translated_189_residues MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP QKVSSINNKNLSSYLGVSHEFLSKIKRRC >Mature_189_residues MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP QKVSSINNKNLSSYLGVSHEFLSKIKRRC
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22450; Mature: 22450
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYI CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEE VNENGTETVIFFSFEDEWMCDLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPK ECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH IMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYPQKVSSINNKNLSSYLGVSHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCHH FLSKIKRRC HHHHHHHCC >Mature Secondary Structure MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYI CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEE VNENGTETVIFFSFEDEWMCDLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPK ECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH IMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYPQKVSSINNKNLSSYLGVSHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCHH FLSKIKRRC HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA