| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cshA [H]
Identifier: 146300157
GI number: 146300157
Start: 2875443
End: 2877347
Strand: Reverse
Name: cshA [H]
Synonym: Fjoh_2402
Alternate gene names: 146300157
Gene position: 2877347-2875443 (Counterclockwise)
Preceding gene: 146300158
Following gene: 146300156
Centisome position: 47.19
GC content: 38.06
Gene sequence:
>1905_bases ATGAATAAATTTGAACAATTAGGATTGAATGAATCGTTACTGAAGGCGATTTTAGATCTAGGATTTGAAAATCCGTCAGA GGTACAGGAAAAGGCGATTCCCCTATTATTGGAAAAAGACACAGATATGGTTGCGTTGGCTCAGACAGGGACAGGGAAAA CGGCAGCTTTCGGTTTTCCGCTAATTCAAAAAATTGATGCTGACAATAGAAACACACAAGCATTAGTTTTATCGCCAACA CGAGAACTTTGTTTACAGATTACCAACGAACTTAAAAACTACTCAAAATACGAAAAAGGTATTAATGTGGTAGCAGTTTA CGGCGGGGCTAGTATTACAGAGCAAGCTAGAGAGATTAAAAGAGGCGCACAAATTATTGTGGCTACTCCAGGAAGAATGC AAGACATGATTAACAGAGGTTTAGTTAACATTAAAAATATAGATTACTGTATTCTTGATGAAGCTGATGAGATGTTGAAC ATGGGATTCTATGAAGACATCGTATCTATTTTATCAGATACTCCAGATCAAAAAAACACATGGTTGTTCTCTGCAACTAT GCCGCAAGAGGTTGCCAGAATTGCAAAACAATTCATGAGCGAACCGGTTGAAATTACTGTTGGTGCTAAGAACTCAGGTT CTGCAACAGTTTCTCACGAATTTTACTTAGTAAATGCTCGTGATCGTTACGAAGCTCTAAAACGTTTAGCAGATGCTAAC CCGGATATTTTCTCTGTAGTTTTCTGTCGTACTAAAAGAGATACACAGGCTGTAGCTGAAAAATTAATTGAAGATGGATA TAGCGCCGCTGCGTTACACGGAGATTTATCTCAGGCACAACGTGACGGGGTAATGAAATCGTTCCGTGGAAGACAAATTC AGATGCTTGTTGCTACTGACGTTGCTGCACGTGGTATTGACGTTGATAACGTAACTCACGTTGTAAACTACCAATTACCA GATGAGATTGAAACTTACAACCACCGTTCTGGACGTACAGGTAGAGCTGGAAAATTAGGAACTTCTATTGTAATCGTTAC AAAAAGTGAGTTACGTAAAATTTCTTCTATCGAGAGAATCATTAAACAAAAATTCGAAGAAAAAGCTATTCCATCTGGAA TTGAAATCTGCGAAATTCAGTTATTACACTTAGCAAACAAAATTAAAGATACTGAGGTTGATCACGAAATTGACAACTAT TTACCAGCAATTAACAATGTTCTTGAAGATTTATCTAAAGAAGAATTGATTAAGAAAATGGTATCTGTAGAATTTAACCG TTTCATTACTTACTACAAAAAGAATAGAGATATCTCTACTCAATCTTCTGGAGAAAGACGTGAAAGAGGTGATTCTGAGC CAAGAGAATTCAACAACAACGGAGCTGTTCGTTATTTTGTAAACATTGGTTCTAGAGACAATTTTGACTGGATGTCTTTA AAAGATTACTTGAAAGAAACATTAGACTTAGGTCGTGATGACGTTTTCAAAGTAGATGTAAAAGAAGGTTTCTCTTTCTT TAACACTGATCCTGAGCACACTGATAAAGTAATGGATATTTTAAACAACGTTCAATTAGAAGGACGTCGTATTAATGTTG AAATTTCTAAAAATGACGGAGGCGGAAGACGTGACCACAACAATCGTGGCGGCGGAAGAAATTCTGGCGGACAAAGAAGA GAAGGAAACTTCGCTCCAAGACGTGAAGGTTCTGGCGGAGGTTTTAGAAGCGACAGAAATTCTGCTCCAAGACGTGAAGG TTCTGGAGGCGGATTTAGAAGCGACAGAAACTCTGCTCCAAGAGAAGGAGGTTTTAGAAGAAACGAAGGTGGTTCTGACA GAGCTCCAAGACGTTCTGAAAGTTTTGGTGATTCATCAAGACCAAGAAGACCAAGAAGAGATTAA
Upstream 100 bases:
>100_bases CTTTTTGATAATCAAATCATAACAAATGTATAATTCTTGAAATTGCATTAGTTTATGTGAATAATTAACAGTAATTTTGC ACCCTATTTTAAATACATAT
Downstream 100 bases:
>100_bases TTATTTAATATCTTAAAAATACAAAATCCCAAATTCCAGACATAATTGGAATTTGGGATTTTTTCATATTAAGAATCTTA CTCAACAAAATAAGTTTTGT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFPLIQKIDADNRNTQALVLSPT RELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIKRGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLN MGFYEDIVSILSDTPDQKNTWLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLADAN PDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVDNVTHVVNYQLP DEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERIIKQKFEEKAIPSGIEICEIQLLHLANKIKDTEVDHEIDNY LPAINNVLEDLSKEELIKKMVSVEFNRFITYYKKNRDISTQSSGERRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSL KDYLKETLDLGRDDVFKVDVKEGFSFFNTDPEHTDKVMDILNNVQLEGRRINVEISKNDGGGRRDHNNRGGGRNSGGQRR EGNFAPRREGSGGGFRSDRNSAPRREGSGGGFRSDRNSAPREGGFRRNEGGSDRAPRRSESFGDSSRPRRPRRD
Sequences:
>Translated_634_residues MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFPLIQKIDADNRNTQALVLSPT RELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIKRGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLN MGFYEDIVSILSDTPDQKNTWLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLADAN PDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVDNVTHVVNYQLP DEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERIIKQKFEEKAIPSGIEICEIQLLHLANKIKDTEVDHEIDNY LPAINNVLEDLSKEELIKKMVSVEFNRFITYYKKNRDISTQSSGERRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSL KDYLKETLDLGRDDVFKVDVKEGFSFFNTDPEHTDKVMDILNNVQLEGRRINVEISKNDGGGRRDHNNRGGGRNSGGQRR EGNFAPRREGSGGGFRSDRNSAPRREGSGGGFRSDRNSAPREGGFRRNEGGSDRAPRRSESFGDSSRPRRPRRD >Mature_634_residues MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFPLIQKIDADNRNTQALVLSPT RELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIKRGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLN MGFYEDIVSILSDTPDQKNTWLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLADAN PDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVDNVTHVVNYQLP DEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERIIKQKFEEKAIPSGIEICEIQLLHLANKIKDTEVDHEIDNY LPAINNVLEDLSKEELIKKMVSVEFNRFITYYKKNRDISTQSSGERRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSL KDYLKETLDLGRDDVFKVDVKEGFSFFNTDPEHTDKVMDILNNVQLEGRRINVEISKNDGGGRRDHNNRGGGRNSGGQRR EGNFAPRREGSGGGFRSDRNSAPRREGSGGGFRSDRNSAPREGGFRRNEGGSDRAPRRSESFGDSSRPRRPRRD
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=37.1584699453552, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI301171467, Length=399, Percent_Identity=37.34335839599, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI301171475, Length=399, Percent_Identity=37.34335839599, Blast_Score=253, Evalue=5e-67, Organism=Homo sapiens, GI87196351, Length=399, Percent_Identity=37.34335839599, Blast_Score=253, Evalue=5e-67, Organism=Homo sapiens, GI41327773, Length=385, Percent_Identity=35.8441558441558, Blast_Score=249, Evalue=8e-66, Organism=Homo sapiens, GI169881239, Length=398, Percent_Identity=36.4321608040201, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI13514809, Length=398, Percent_Identity=36.4321608040201, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI222352149, Length=394, Percent_Identity=35.7868020304569, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=34.375, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=34.375, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI164664518, Length=374, Percent_Identity=33.4224598930481, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=38.5026737967914, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=34.2175066312997, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=33.8842975206612, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI50659095, Length=577, Percent_Identity=30.5025996533795, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.3107344632768, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.3107344632768, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.3107344632768, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.3107344632768, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=6e-58, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=38.1720430107527, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=33.4231805929919, Blast_Score=222, Evalue=1e-57, Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=33.4231805929919, Blast_Score=222, Evalue=1e-57, Organism=Homo sapiens, GI21071032, Length=362, Percent_Identity=33.7016574585635, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI224593278, Length=399, Percent_Identity=34.3358395989975, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=33.8935574229692, Blast_Score=219, Evalue=7e-57, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=33.3333333333333, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI13129006, Length=390, Percent_Identity=32.3076923076923, Blast_Score=212, Evalue=1e-54, Organism=Homo sapiens, GI21040371, Length=347, Percent_Identity=32.2766570605187, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=32.1022727272727, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=32.1022727272727, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI4758112, Length=347, Percent_Identity=33.1412103746398, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI18375623, Length=347, Percent_Identity=33.1412103746398, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=32.1428571428571, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI6005743, Length=374, Percent_Identity=32.8877005347594, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI8922886, Length=374, Percent_Identity=32.620320855615, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI41327776, Length=363, Percent_Identity=30.8539944903581, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI164419732, Length=352, Percent_Identity=32.6704545454545, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=32.6815642458101, Blast_Score=186, Evalue=7e-47, Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=31.2, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI256223453, Length=404, Percent_Identity=29.9504950495049, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=31.2, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=32.5068870523416, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=35.0140056022409, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=31.6417910447761, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=30.0242130750605, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI13514831, Length=400, Percent_Identity=28, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=26.448362720403, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=410, Percent_Identity=27.3170731707317, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=27.390180878553, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI9966805, Length=391, Percent_Identity=27.3657289002558, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI154759257, Length=399, Percent_Identity=27.0676691729323, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.0232558139535, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI4557365, Length=146, Percent_Identity=26.027397260274, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI87082221, Length=413, Percent_Identity=40.1937046004843, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=38.7700534759358, Blast_Score=282, Evalue=5e-77, Organism=Escherichia coli, GI1787605, Length=381, Percent_Identity=36.2204724409449, Blast_Score=244, Evalue=9e-66, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=33.0623306233062, Blast_Score=195, Evalue=8e-51, Organism=Escherichia coli, GI1788930, Length=361, Percent_Identity=32.9639889196676, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI48994977, Length=119, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=38.5026737967914, Blast_Score=268, Evalue=7e-72, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=38.3561643835616, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=38.0821917808219, Blast_Score=261, Evalue=9e-70, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=35.149863760218, Blast_Score=237, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71995718, Length=362, Percent_Identity=38.121546961326, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI86570094, Length=366, Percent_Identity=35.2459016393443, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17537549, Length=389, Percent_Identity=35.9897172236504, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=37.1900826446281, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=37.1900826446281, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=37.1900826446281, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=32.0209973753281, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17552642, Length=377, Percent_Identity=33.1564986737401, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507945, Length=383, Percent_Identity=32.6370757180157, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI115533224, Length=362, Percent_Identity=32.0441988950276, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=32.8690807799443, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=32.8690807799443, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=31.6489361702128, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.6489361702128, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=31.0991957104558, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71982858, Length=348, Percent_Identity=33.6206896551724, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17510559, Length=398, Percent_Identity=31.9095477386935, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=32.5268817204301, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507879, Length=385, Percent_Identity=30.3896103896104, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507881, Length=401, Percent_Identity=29.1770573566085, Blast_Score=184, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=28.1159420289855, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17509811, Length=379, Percent_Identity=29.8153034300792, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI193208216, Length=412, Percent_Identity=29.3689320388349, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=28.8461538461538, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17505370, Length=356, Percent_Identity=33.7078651685393, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=27.720207253886, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=28.8713910761155, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=27.3458445040214, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71990816, Length=358, Percent_Identity=30.4469273743017, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=25.4196642685851, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17556951, Length=373, Percent_Identity=27.6139410187668, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148291, Length=363, Percent_Identity=28.099173553719, Blast_Score=136, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=35.5, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71987152, Length=113, Percent_Identity=41.5929203539823, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=22.2873900293255, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71987993, Length=112, Percent_Identity=33.0357142857143, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71987997, Length=112, Percent_Identity=33.0357142857143, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320224, Length=362, Percent_Identity=37.8453038674033, Blast_Score=259, Evalue=9e-70, Organism=Saccharomyces cerevisiae, GI6325138, Length=383, Percent_Identity=37.597911227154, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=391, Percent_Identity=35.8056265984655, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=37.8151260504202, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=40.2666666666667, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=40.2666666666667, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=38.4401114206128, Blast_Score=234, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=35.3887399463807, Blast_Score=230, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=33.1550802139037, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=422, Percent_Identity=31.5165876777251, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=34.0659340659341, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=29.1169451073986, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=31.25, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=370, Percent_Identity=33.2432432432432, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=31.1855670103093, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=27.7486910994764, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=406, Percent_Identity=31.0344827586207, Blast_Score=170, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6322427, Length=367, Percent_Identity=32.1525885558583, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=33.1506849315069, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=388, Percent_Identity=29.1237113402062, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=31.283422459893, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=420, Percent_Identity=26.6666666666667, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=25.6038647342995, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=24.6376811594203, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6322876, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=23.1132075471698, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323844, Length=337, Percent_Identity=21.6617210682493, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=37.431693989071, Blast_Score=253, Evalue=4e-67, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=35.6756756756757, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=37.0473537604457, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=36.986301369863, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI17985987, Length=403, Percent_Identity=36.2282878411911, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=33.8842975206612, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI28574962, Length=373, Percent_Identity=35.3887399463807, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=38.1962864721485, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=38.1962864721485, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=38.1962864721485, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=38.1962864721485, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=35.149863760218, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24644483, Length=383, Percent_Identity=33.420365535248, Blast_Score=222, Evalue=7e-58, Organism=Drosophila melanogaster, GI24644487, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI45551833, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644485, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI281361218, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644481, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644479, Length=383, Percent_Identity=33.420365535248, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=31.758530183727, Blast_Score=219, Evalue=6e-57, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=33.3333333333333, Blast_Score=219, Evalue=6e-57, Organism=Drosophila melanogaster, GI18857967, Length=375, Percent_Identity=33.0666666666667, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=33.6898395721925, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=33.6898395721925, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI28575014, Length=366, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI21356161, Length=412, Percent_Identity=33.252427184466, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=32.4712643678161, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=32.4712643678161, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=32.4712643678161, Blast_Score=195, Evalue=8e-50, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=34.8101265822785, Blast_Score=193, Evalue=4e-49, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=32.8125, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=32.5905292479109, Blast_Score=182, Evalue=7e-46, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=32.1428571428571, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=32.4929971988796, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=32.4929971988796, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI20130173, Length=316, Percent_Identity=31.0126582278481, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=28.4574468085106, Blast_Score=152, Evalue=7e-37, Organism=Drosophila melanogaster, GI18859659, Length=446, Percent_Identity=26.0089686098655, Blast_Score=147, Evalue=3e-35, Organism=Drosophila melanogaster, GI28571338, Length=446, Percent_Identity=26.0089686098655, Blast_Score=147, Evalue=3e-35, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=29.5384615384615, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI24643725, Length=402, Percent_Identity=27.8606965174129, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17647335, Length=382, Percent_Identity=25.6544502617801, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=26.4305177111717, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI17136666, Length=408, Percent_Identity=26.7156862745098, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.4252873563218, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24646066, Length=336, Percent_Identity=22.3214285714286, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 71170; Mature: 71170
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFP CCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCCEECCCH LIQKIDADNRNTQALVLSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIK HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH RGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLNMGFYEDIVSILSDTPDQKNT CCCEEEEECCHHHHHHHHCCCEEECCCCEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCC WLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLADAN EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCHHHHHHHHHHHCCC PDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATD CCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEEH VAARGIDVDNVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERI HHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH IKQKFEEKAIPSGIEICEIQLLHLANKIKDTEVDHEIDNYLPAINNVLEDLSKEELIKKM HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH VSVEFNRFITYYKKNRDISTQSSGERRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSL HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHH KDYLKETLDLGRDDVFKVDVKEGFSFFNTDPEHTDKVMDILNNVQLEGRRINVEISKNDG HHHHHHHHHCCCCCEEEEEHHHCCHHCCCCHHHHHHHHHHHHCCEECCEEEEEEEECCCC GGRRDHNNRGGGRNSGGQRREGNFAPRREGSGGGFRSDRNSAPRREGSGGGFRSDRNSAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC REGGFRRNEGGSDRAPRRSESFGDSSRPRRPRRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFP CCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCCEECCCH LIQKIDADNRNTQALVLSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIK HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH RGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLNMGFYEDIVSILSDTPDQKNT CCCEEEEECCHHHHHHHHCCCEEECCCCEEEECCHHHHHHCCHHHHHHHHHHCCCCCCCC WLFSATMPQEVARIAKQFMSEPVEITVGAKNSGSATVSHEFYLVNARDRYEALKRLADAN EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCHHHHHHHHHHHCCC PDIFSVVFCRTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATD CCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEEH VAARGIDVDNVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERI HHHCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH IKQKFEEKAIPSGIEICEIQLLHLANKIKDTEVDHEIDNYLPAINNVLEDLSKEELIKKM HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH VSVEFNRFITYYKKNRDISTQSSGERRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSL HHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHH KDYLKETLDLGRDDVFKVDVKEGFSFFNTDPEHTDKVMDILNNVQLEGRRINVEISKNDG HHHHHHHHHCCCCCEEEEEHHHCCHHCCCCHHHHHHHHHHHHCCEECCEEEEEEEECCCC GGRRDHNNRGGGRNSGGQRREGNFAPRREGSGGGFRSDRNSAPRREGSGGGFRSDRNSAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC REGGFRRNEGGSDRAPRRSESFGDSSRPRRPRRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA