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The map label for this gene is erg3 [H]

Identifier: 146300117

GI number: 146300117

Start: 2833646

End: 2834482

Strand: Reverse

Name: erg3 [H]

Synonym: Fjoh_2362

Alternate gene names: 146300117

Gene position: 2834482-2833646 (Counterclockwise)

Preceding gene: 146300118

Following gene: 146300116

Centisome position: 46.49

GC content: 34.05

Gene sequence:

>837_bases
ATGAACGAAATTATTTCTTACTTCAGTACTATTCCGTCTTCACACCGGAGCTTAATTTTAGTGGGCGGTATTACCATTTT
TTGGTTAATTGAAAATACATTTCCACTGTTTCAAATGCAGTACAAAAAATGGCATCATGCCGGAATCAATATTTTCTTTA
CCATTACCACAATTATCGTAAATTTTATTCTGGCTTTTATTCTAATAAAAACAGCTGCCTGGACAACAGAAAATCATTTT
GGAATTCTGCAATGGCTTCCTCAAATGTCAATTTGGCTCTATACCATTATAGGTTTGCTTTTATTGGATTTAATAGGCGC
TTATTTAGTACATTTAATCGAACATAAAGTAAAGTTTTTGTGGCGTTTTCATCTTATACACCATACCGATACCTGGATTG
ACACCACAACAGCAAACCGGCATCATCCCGGCGAAAGCGTAATACGTTTCGCTTTTACTACACTTGGCGTTTTAATTGTA
GGAAGCCCTATGTGGATGGTTTTTCTTTATCAGTCACTTTCTGTGGTTGCCTCACAATTCAATCATGCTAATATTTCCCT
GCCACATAAATTAGATGTTTTTCTGAGCTATTTTATTGTTTCTCCTAATATGCACAAAGTACATCATCATTATGTTTTAC
CTTATACAGACAGTAATTATGGTAATATTTTTTCGGTTTGGGACAGGCTTTTCGGCACATTTACCACTTTACCAAAAGAT
CAGTTAATTTATGGCGTAGATACGCACATGAAGCGTGAAGAAAACAACGAATTAAAAAATTTACTTCAAATTCCGTTTCA
AAAATCCAGATCTGTTAAAAACACTAAAAATCAATAA

Upstream 100 bases:

>100_bases
AATTTAAAGAGAAAATCAGATATATTTATATTAGGTTTTCTCTTTTTCTTTAGATAAAATCAAAAAGGAAAAGCTTCTTT
CTAACTCAAATCTAATTGTT

Downstream 100 bases:

>100_bases
AAAAAATTATAGTCCATCGAAACAACTAATTATTTTTTTTATTAATATTGATATATAAAATGAAAATCAATCTATTAATC
ATTAACCCTCTATTTTGAAT

Product: sterol desaturase-like protein

Products: NA

Alternate protein names: Sterol-C5-desaturase [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNEIISYFSTIPSSHRSLILVGGITIFWLIENTFPLFQMQYKKWHHAGINIFFTITTIIVNFILAFILIKTAAWTTENHF
GILQWLPQMSIWLYTIIGLLLLDLIGAYLVHLIEHKVKFLWRFHLIHHTDTWIDTTTANRHHPGESVIRFAFTTLGVLIV
GSPMWMVFLYQSLSVVASQFNHANISLPHKLDVFLSYFIVSPNMHKVHHHYVLPYTDSNYGNIFSVWDRLFGTFTTLPKD
QLIYGVDTHMKREENNELKNLLQIPFQKSRSVKNTKNQ

Sequences:

>Translated_278_residues
MNEIISYFSTIPSSHRSLILVGGITIFWLIENTFPLFQMQYKKWHHAGINIFFTITTIIVNFILAFILIKTAAWTTENHF
GILQWLPQMSIWLYTIIGLLLLDLIGAYLVHLIEHKVKFLWRFHLIHHTDTWIDTTTANRHHPGESVIRFAFTTLGVLIV
GSPMWMVFLYQSLSVVASQFNHANISLPHKLDVFLSYFIVSPNMHKVHHHYVLPYTDSNYGNIFSVWDRLFGTFTTLPKD
QLIYGVDTHMKREENNELKNLLQIPFQKSRSVKNTKNQ
>Mature_278_residues
MNEIISYFSTIPSSHRSLILVGGITIFWLIENTFPLFQMQYKKWHHAGINIFFTITTIIVNFILAFILIKTAAWTTENHF
GILQWLPQMSIWLYTIIGLLLLDLIGAYLVHLIEHKVKFLWRFHLIHHTDTWIDTTTANRHHPGESVIRFAFTTLGVLIV
GSPMWMVFLYQSLSVVASQFNHANISLPHKLDVFLSYFIVSPNMHKVHHHYVLPYTDSNYGNIFSVWDRLFGTFTTLPKD
QLIYGVDTHMKREENNELKNLLQIPFQKSRSVKNTKNQ

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sterol desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006694 [H]

Pfam domain/function: PF04116 FA_hydroxylase [H]

EC number: NA

Molecular weight: Translated: 32513; Mature: 32513

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIISYFSTIPSSHRSLILVGGITIFWLIENTFPLFQMQYKKWHHAGINIFFTITTIIV
CHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
NFILAFILIKTAAWTTENHFGILQWLPQMSIWLYTIIGLLLLDLIGAYLVHLIEHKVKFL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRFHLIHHTDTWIDTTTANRHHPGESVIRFAFTTLGVLIVGSPMWMVFLYQSLSVVASQF
HHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
NHANISLPHKLDVFLSYFIVSPNMHKVHHHYVLPYTDSNYGNIFSVWDRLFGTFTTLPKD
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
QLIYGVDTHMKREENNELKNLLQIPFQKSRSVKNTKNQ
CEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
>Mature Secondary Structure
MNEIISYFSTIPSSHRSLILVGGITIFWLIENTFPLFQMQYKKWHHAGINIFFTITTIIV
CHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
NFILAFILIKTAAWTTENHFGILQWLPQMSIWLYTIIGLLLLDLIGAYLVHLIEHKVKFL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRFHLIHHTDTWIDTTTANRHHPGESVIRFAFTTLGVLIVGSPMWMVFLYQSLSVVASQF
HHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
NHANISLPHKLDVFLSYFIVSPNMHKVHHHYVLPYTDSNYGNIFSVWDRLFGTFTTLPKD
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
QLIYGVDTHMKREENNELKNLLQIPFQKSRSVKNTKNQ
CEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]