| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300115
Identifier: 146300115
GI number: 146300115
Start: 2831300
End: 2833153
Strand: Reverse
Name: 146300115
Synonym: Fjoh_2360
Alternate gene names: NA
Gene position: 2833153-2831300 (Counterclockwise)
Preceding gene: 146300116
Following gene: 146300112
Centisome position: 46.47
GC content: 32.74
Gene sequence:
>1854_bases ATGAAAAAAATACTTTACACATTAGCTCTTGCCGTAACGCTTTGGAGCTGTAAAACAGGTAGCACTGCTGGAAAAAGCAA TGTGGTAGATGTTAATATTAATTTAACTGATGTAAAAGATGATAAGGTTTTAGTAACGGTAACACCGCCAAAAATTAAAA CAGATGAAATCGTTTACAGCATTCCAAAAACAGTCCCAGGAACGTATTCTACAGACAACTACGGAAAATATTCTGAAGAT TTTAAAGCATTTGATGTTAAAGGAAATCCTTTAACTGTAAAAAGACTTGACGATAATTCATGGTCTATTTCAAATGCAAA AGCGCTGGCAAAAATTACCTATTTAGTTAATGATACTTTTGATACTGAAAAAGGAACCGGATTTGGTAATGATGATGTTT TCTCTCCAGCGGGAACAAATATCAATGCAGGTGTAAATTTCATGGTAAATACACATGGTTTTGTAGGTTATTTTAAAGAT AATTTAGAAGTTCCTTACAAAGTGACCATTACACATCCTGAAACACTTTGGGGAGCAACTTCAATGACAGATGAAGATGC AAGCAAAACAAGCGATGTTTTTACAACACCTCGTTATGCGGTATTGGTAGAAAATCCAATTATGTATTCTAAACCAGATT ATACAACATTTAACGTTAACGGAATGGATATTTTAATTGCGGTTTATTCTCCAACTGGAAAATTTACTGCAGAAAGTATT ACTCCGGAAATGAAAACAATGATGACGGCTCAGAAAAACTTTTTAGGAAAAGTAAACTCTACTAAAAAATATACCGTTTT ACTGTACTTATCAAGCATGGCTAAAGACGATGCACACGGTTTTGGAGCTTTAGAACACCCAACAGCAACTACAGTAGTAC TTCCTGAGACTATGCCGAAAGAAAAACTGGTAGAATCTATGAAAGATGTGGTTTCTCACGAATTCTTTCATATTGTAACT CCATTAACCATTCACTCAAAAGAAATTCAGTATTTTGATTATAACGCACCAAAAATGTCTGAACATTTATGGATGTATGA AGGTGTAACAGAGTATTTTGCCAACCTTTTCCAAATTAATCAGGGATTAATTGATGAAGCTGAGTTCTATTCTCGTATTG CTGATAAAATTGAGCAGGCAAAAACTTTAGATGATACTATGTCATTTACTGTAATGAGTAAAAATGTATTAGAGCAGCCA TATAAAGATCAATACTTAAATGTATATCAAAAAGGTGCTTTAATAGGTATGTGCATTGACATTATCATTAGAGAAAAAAG CAACGGAGAAAGAGGGATTCTTGATTTAATGCACAAACTTTCTGAAGAATATGGCGTTAATAAACCATTTAATGATGATG AGCTTTTTGCTAAAATAACGTCTTTAACTTATCCTGAAGTGGGCGAATTCCTAAACAAATATGTAGCAGGAACTACACCA ATTCCTTACGATTTTTATCTGGCTAAAGCAGGAGTAACAAAATCAAAAGAAAAAAAGGCAGGTCCAATTTTCTTAAAAGG TCAAACTCCATACATCACAATTGATAAACAAACAAAAGAAATTGCTGTTCGTTCTGATATTGAACCAAGTGCATTCTTTA AAAATCTTAACTTAAAAGGAGGCGATAAAATTTTAGCAGTAAACAACAAAGCATATTCTTTAGAAAACATTTATGATCTT ATTACTGAAAGTGAAAACTGGAAAGAAAATGATCCTATTACTTTAAAAGTAAAACGCGGCGGTAAAGAAGAAACCATAAA AGGAACCGTTAAACTTCCGTTTGAAGAAACTGAAACTTTTAAAGCGACTGATGCTTCAAAAGACAAAATTAAAAATGCAT GGTTAAAAGGATAA
Upstream 100 bases:
>100_bases GATTAAAACTCCTGATTTCGGGAGTTTTTTTTATATTTTTAAATTTATTGTAACTTTTAAACAATTTTTAAGTCCAATAC ACATAACTAAACATAAACAA
Downstream 100 bases:
>100_bases TCCTTTCTAACCCATAAAAAAACCGACAAGTGATTGTCGGTTTTTTTTATACTGGAACTTTATTAAGGTTGTCAGGCTGA GCGAAGTCGAAGCCTTCGCA
Product: peptidase M61 domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Aminopeptidase N Family Protein; Metallopeptidase; M61 Glycyl Aminopeptidase; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG
Sequences:
>Translated_617_residues MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG >Mature_617_residues MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69180; Mature: 69180
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYS CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEE IPKTVPGTYSTDNYGKYSEDFKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTF CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHEEEEEEEEECCC DTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKDNLEVPYKVTITHPETLWGAT CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCHHHCCCC SMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI CCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHC TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPK CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEEEEECCCCCH EKLVESMKDVVSHEFFHIVTPLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQIN HHHHHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHC QGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQPYKDQYLNVYQKGALIGMCID CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCHHEEEEE IIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKG CCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCC GDKILAVNNKAYSLENIYDLITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETF CCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCE KATDASKDKIKNAWLKG ECCCCCHHHHHHHCCCC >Mature Secondary Structure MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYS CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEE IPKTVPGTYSTDNYGKYSEDFKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTF CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHEEEEEEEEECCC DTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKDNLEVPYKVTITHPETLWGAT CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCHHHCCCC SMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI CCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHC TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPK CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEEEEECCCCCH EKLVESMKDVVSHEFFHIVTPLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQIN HHHHHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHC QGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQPYKDQYLNVYQKGALIGMCID CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCHHEEEEE IIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKG CCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCC GDKILAVNNKAYSLENIYDLITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETF CCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCE KATDASKDKIKNAWLKG ECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA