Definition | Metallosphaera sedula DSM 5348 chromosome, complete genome. |
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Accession | NC_009440 |
Length | 2,191,517 |
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Identifier: 146304506
GI number:
Start: 1677092
End: 1678687
Strand: Direct
Name: Not Available
Synonym: Msed_1743
Alternate gene names: NA
Gene position: NA
Preceding gene: 146304505
Following gene: 146304508
Centisome position: NA
GC content: NA
Gene sequence:
>1596_bases GTGAAGCCCTACAGCAATGAGATACTGGAGAGGCTGATTTCGTTTTCCAGATTTCTAGGTGAGGATGAGGAAGGCGGGAA GTTTGAAATCGACCCAGAGAGAGCCAGGTTGAACGGTGTGACTCTGGAACAGATAAAGAAGGTTCTAGGGGAGCTTGGGG TTAAGCTTGACCCTGAAACCCTCAATTTCCTGGAGACCGAAATGGGAGGTTATGACGCAGTTTTCGAGCTAAAGGGTAGC AAGTTGTTGCTCAGGGCCAGGACTAGGATATCGGAGATCTTGAGAAAATACAGGATAAGTATTCCCTATGATCCTGCGGA GAGGATTTACAGGACTAAGCCATTCTACTATCACTTGCTCAGGAGAATCCTAGAGAATGAGGGATTAAGGGTTAAGAGAC TGGACTTAAGCAGGGAACGCTTTTCCCTGAGCTTGTCGGTCAATTTGAGAGAGTATCAGCTTGAGGCAGTTAGAGCCTGG AAAGATAACGGCTACAGGGGCGTTATTGCCCTTCCCACGGGCGCTGGAAAAACTCTCATAGGTGTGCAGGGGATCACTAC ACTGGGCCTGCCTACCCTAATTGTGACGTTTACTAATGAGCAGTTAAGGCAGTGGGAGGAGACCATAAAGAGATTCACAA AGGGAGATGTAGAGGTTGGCCTATACTATAGCCGAAAGAAACATCTAGCCCCCATCACAATCACTACATATCAGACCGCA ATTAAGCATATGGATGAACTCTCATCCTTTCTATTTCTAATAATAGATGAAGCTCACCATCTTCCAGCGGAAAAGTTCAG GGAGATAGCCTTATCCTGCGTCGCCCCCTACAGAATGGCCCTCTCGGCAACGCCTTATAGGTCAGATGGTAAGCATGTGG AACTGTTTAGGTTGATGGGGGGCCTAGTGTATCAGAGAGGAGTTGAGGAACTTGTTGCGCAGGGTTACCTTGCTCAGTTT AGGGTTCTGAGGATCAAGATACCCCTTACCCTTGAGGAGAAGGCGGAATATGATAACCTAACAAGAAAGTTCAGGTCACT GTCTGAGGGAAGGCCAGTCCTAGAGATAGTGAAGAGGGCAAAGGAGGGAGACGTAAAGGCCATGGAGGCTCTAAAAGTAT ACAGCAGGATAAGGTACCTAATAGGTCTAACGAAGGGGAAGTTGTCCAAGATTAGGGAGATCGTTGAGAAAGAAAAGGGT AGAAAGGTTGTAATATTTACCCAGTACGTGGAACATGCAGAGCTTATATCGAAGTTAATTGGGGGGTACATACTCACCGG TCAGATGCCCAAAAGGGAAAGAGAGCTAGTTTTAGAGAAGTTCAAGCAGAGCAACTCCGGCGTTCTGGTTTTGACAACCG TGGGTGATGAAGGGTTAGATATTCCCGATGCAAGTGTGGGAATTGTGGTAGCTGGGACTTCCTCCAAGAGGCAGTACATA CAGAGGCTGGGTAGACTTCTCAGGAATAATTCTGGGAATAAGGTAGCAACGTTATACGAACTCATTGCTAAGGGAACATC AGAGGAATATCAATCCAAGAAGAGGAGGTCTACGTCCTTGGAGGACCTATTTTACTCACTGGAGGACAAGAAATAG
Upstream 100 bases:
>100_bases TACGTTGCCGATAAACCTGAAAAGCTCAACGAGGTAATTGGAGTTAACAGGAAAGTGGTCTTTGTGGAAGTGATATCTGG TGCCCTCGAAGACTTTCTAC
Downstream 100 bases:
>100_bases GTAAGAGAGTGGGCCAGTGCCAGTAGTAGAGTTCTATCGTCGCTTAGGTAAATCTCCTTCCCACTAGAGGAAATTAAGGG ATATCCCCGCACAGTTACTA
Product: DNA repair helicase RAD25
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>531_residues MKPYSNEILERLISFSRFLGEDEEGGKFEIDPERARLNGVTLEQIKKVLGELGVKLDPETLNFLETEMGGYDAVFELKGS KLLLRARTRISEILRKYRISIPYDPAERIYRTKPFYYHLLRRILENEGLRVKRLDLSRERFSLSLSVNLREYQLEAVRAW KDNGYRGVIALPTGAGKTLIGVQGITTLGLPTLIVTFTNEQLRQWEETIKRFTKGDVEVGLYYSRKKHLAPITITTYQTA IKHMDELSSFLFLIIDEAHHLPAEKFREIALSCVAPYRMALSATPYRSDGKHVELFRLMGGLVYQRGVEELVAQGYLAQF RVLRIKIPLTLEEKAEYDNLTRKFRSLSEGRPVLEIVKRAKEGDVKAMEALKVYSRIRYLIGLTKGKLSKIREIVEKEKG RKVVIFTQYVEHAELISKLIGGYILTGQMPKRERELVLEKFKQSNSGVLVLTTVGDEGLDIPDASVGIVVAGTSSKRQYI QRLGRLLRNNSGNKVATLYELIAKGTSEEYQSKKRRSTSLEDLFYSLEDKK
Sequences:
NA
Specific function: NA
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA