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The map label for this gene is traH [H]

Identifier: 146284629

GI number: 146284629

Start: 125089

End: 126453

Strand: Direct

Name: traH [H]

Synonym: Ent638_4303

Alternate gene names: 146284629

Gene position: 125089-126453 (Clockwise)

Preceding gene: 146284628

Following gene: 146284630

Centisome position: 79.3

GC content: 55.9

Gene sequence:

>1365_bases
ATGGTTAAGTCTCTTATTACGGCAGCCTCAATCTTTATGACAGGCATGGCTGCATTGCCGGCGCAGGCTGATGTGAACGG
CGATCTGAACGGTTTCTTTGGCAGTCTTGGTTACAGTGGCAATGTTTCCCAGGCTCAGGCGTGGCAGGGTCAGGCGGCGG
GTTATTACTCAGGGGGGTCCGTGTATCTGCGTAACCCTGTCAAAAACGTGCAGCTTATCTCGATGCAGCTCCCGTCACTG
AACGCCGGTTGTGGCGGCATTGATGCCTATCTGGGGTCGTTCAGTATGATCAGCGGCGAGGAAATCCAGCGTTTCGTGAA
GCAAATCATGAGTAACGCAGCGGGTTACGCCTTTGACCTTGCCCTGCAGACAATGGTCCCGGAACTGAAGCAGGCAAAGG
ACTTCCTGCAGAAACTCGCCAGCGACGTGAACTCCATGAACATGAGCTCCTGTCAGGCCGCGCAGGGGATTATCGGCGGG
CTGTGGCCCGTCACGCAGGTCTCCCAGCAGAAAATCTGTCAGGACATTGCCGGCGAAACCAACATGTTCTCTGACTGGGC
CTCCTCCCGTCAGGGCTGCACGGTGGGCGGGCAGAGTAATAAGGTGACCGATAAGGCCGGGGACGATCAGAAAGACCAGG
TGCTGAAAAACAAGAACCTTATCTGGGACACGCTGAGTAAGAACGGGCTGCTGGGGAATGACCGGGCACTGAAAGAACTG
GTCATGAGTACCGTCGGGTCGATCATCTTTAACAACAATGGCGACGTCACCATTCTGACCCCCCTGGTCGATAACCGCGA
CCTGATAAAGGTGCTCATGCGGGGCGGGACTGCAAAGGTTTACGGCTGTGATGAGGCGACGTTGTGTCTGGGTCCTGTCG
TCAAAGACCTGACGATCTCAGAGTCGAACGCCCTGGTGACGCTGGTTAAAAACCTGATGCTCTCGATGCAGAACAAGCTG
GTTGATGACACCGCGCTGAGCAATCAGGAGAAAGGCTTTGTGAACACCACGTCCGTGCCGGTGCTGAAATACCTGACCAA
CGCCCAGAGCATGGGCATGAGTGCGACCTATCTGCTGCAGGTGGCTGACTTTATCGCTCAGGACCTGATGATCCAGTACC
TCCAGGAGCTGGTTAAACAGGCGAGCCTGTCACTGGCCGGCAAGAACTTCCCGGAAGAGGCCGCGGCAAAACTGCGCGAC
AACATCATTCACGCCCAGGGATTACTGGCTGACATGAAGCTGCAGTCGGCAGCGGATCAGAACGCGCTCGACGGTATCGA
CCGCAACATGCAATACCTGCAACAGCAGGTATCCACCATTGTTTCAGGCTCCTATCAGAGCAACTACCACTGGGGGGATC
GCTGA

Upstream 100 bases:

>100_bases
CTGCTGCTGATTTCGCTGAGCGGAGGATTTATCGTTTCTGCGGCAGGCCATTACGCCATGCGCGTCGCGCTGAACAAACC
ACTGCAGGGGGAGGCCCGAC

Downstream 100 bases:

>100_bases
TGCCAGGCATAAAGAAATACAGCTTTATCGATCCCGGTATCCGGACGCTGGTTGCGACCCTGAATGCATATGGATTACGT
ACATATGCATCGTGTCAGGG

Product: conjugal transfer pilus assembly protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MVKSLITAASIFMTGMAALPAQADVNGDLNGFFGSLGYSGNVSQAQAWQGQAAGYYSGGSVYLRNPVKNVQLISMQLPSL
NAGCGGIDAYLGSFSMISGEEIQRFVKQIMSNAAGYAFDLALQTMVPELKQAKDFLQKLASDVNSMNMSSCQAAQGIIGG
LWPVTQVSQQKICQDIAGETNMFSDWASSRQGCTVGGQSNKVTDKAGDDQKDQVLKNKNLIWDTLSKNGLLGNDRALKEL
VMSTVGSIIFNNNGDVTILTPLVDNRDLIKVLMRGGTAKVYGCDEATLCLGPVVKDLTISESNALVTLVKNLMLSMQNKL
VDDTALSNQEKGFVNTTSVPVLKYLTNAQSMGMSATYLLQVADFIAQDLMIQYLQELVKQASLSLAGKNFPEEAAAKLRD
NIIHAQGLLADMKLQSAADQNALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGDR

Sequences:

>Translated_454_residues
MVKSLITAASIFMTGMAALPAQADVNGDLNGFFGSLGYSGNVSQAQAWQGQAAGYYSGGSVYLRNPVKNVQLISMQLPSL
NAGCGGIDAYLGSFSMISGEEIQRFVKQIMSNAAGYAFDLALQTMVPELKQAKDFLQKLASDVNSMNMSSCQAAQGIIGG
LWPVTQVSQQKICQDIAGETNMFSDWASSRQGCTVGGQSNKVTDKAGDDQKDQVLKNKNLIWDTLSKNGLLGNDRALKEL
VMSTVGSIIFNNNGDVTILTPLVDNRDLIKVLMRGGTAKVYGCDEATLCLGPVVKDLTISESNALVTLVKNLMLSMQNKL
VDDTALSNQEKGFVNTTSVPVLKYLTNAQSMGMSATYLLQVADFIAQDLMIQYLQELVKQASLSLAGKNFPEEAAAKLRD
NIIHAQGLLADMKLQSAADQNALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGDR
>Mature_454_residues
MVKSLITAASIFMTGMAALPAQADVNGDLNGFFGSLGYSGNVSQAQAWQGQAAGYYSGGSVYLRNPVKNVQLISMQLPSL
NAGCGGIDAYLGSFSMISGEEIQRFVKQIMSNAAGYAFDLALQTMVPELKQAKDFLQKLASDVNSMNMSSCQAAQGIIGG
LWPVTQVSQQKICQDIAGETNMFSDWASSRQGCTVGGQSNKVTDKAGDDQKDQVLKNKNLIWDTLSKNGLLGNDRALKEL
VMSTVGSIIFNNNGDVTILTPLVDNRDLIKVLMRGGTAKVYGCDEATLCLGPVVKDLTISESNALVTLVKNLMLSMQNKL
VDDTALSNQEKGFVNTTSVPVLKYLTNAQSMGMSATYLLQVADFIAQDLMIQYLQELVKQASLSLAGKNFPEEAAAKLRD
NIIHAQGLLADMKLQSAADQNALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGDR

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 48919; Mature: 48919

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSLITAASIFMTGMAALPAQADVNGDLNGFFGSLGYSGNVSQAQAWQGQAAGYYSGGS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCEECCCE
VYLRNPVKNVQLISMQLPSLNAGCGGIDAYLGSFSMISGEEIQRFVKQIMSNAAGYAFDL
EEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHH
ALQTMVPELKQAKDFLQKLASDVNSMNMSSCQAAQGIIGGLWPVTQVSQQKICQDIAGET
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
NMFSDWASSRQGCTVGGQSNKVTDKAGDDQKDQVLKNKNLIWDTLSKNGLLGNDRALKEL
CHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHH
VMSTVGSIIFNNNGDVTILTPLVDNRDLIKVLMRGGTAKVYGCDEATLCLGPVVKDLTIS
HHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCEEC
ESNALVTLVKNLMLSMQNKLVDDTALSNQEKGFVNTTSVPVLKYLTNAQSMGMSATYLLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHH
VADFIAQDLMIQYLQELVKQASLSLAGKNFPEEAAAKLRDNIIHAQGLLADMKLQSAADQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGDR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVKSLITAASIFMTGMAALPAQADVNGDLNGFFGSLGYSGNVSQAQAWQGQAAGYYSGGS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCEECCCE
VYLRNPVKNVQLISMQLPSLNAGCGGIDAYLGSFSMISGEEIQRFVKQIMSNAAGYAFDL
EEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHH
ALQTMVPELKQAKDFLQKLASDVNSMNMSSCQAAQGIIGGLWPVTQVSQQKICQDIAGET
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
NMFSDWASSRQGCTVGGQSNKVTDKAGDDQKDQVLKNKNLIWDTLSKNGLLGNDRALKEL
CHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHH
VMSTVGSIIFNNNGDVTILTPLVDNRDLIKVLMRGGTAKVYGCDEATLCLGPVVKDLTIS
HHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCEEC
ESNALVTLVKNLMLSMQNKLVDDTALSNQEKGFVNTTSVPVLKYLTNAQSMGMSATYLLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHH
VADFIAQDLMIQYLQELVKQASLSLAGKNFPEEAAAKLRDNIIHAQGLLADMKLQSAADQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NALDGIDRNMQYLQQQVSTIVSGSYQSNYHWGDR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]