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The map label for this gene is yubP [H]

Identifier: 146284605

GI number: 146284605

Start: 105595

End: 106416

Strand: Direct

Name: yubP [H]

Synonym: Ent638_4279

Alternate gene names: 146284605

Gene position: 105595-106416 (Clockwise)

Preceding gene: 146284604

Following gene: 146284607

Centisome position: 66.94

GC content: 47.93

Gene sequence:

>822_bases
ATGGTCAGTTTTGCAAGCCGTTATCGTGTCCCGACCTCTATTCGCCAGAATCGCCCGCTGACAAACGATGAATTACAACG
CTTTGTCCCGAGCGCGTTTTCTGAAGATAAACACGATTCACGCTCAGAGCGTTATACCTATATTCCGACCATTGTGCTCC
TGGATCGTTTACGCGACGAAGGTTTCCAGCCCTATTATGCAACCCAGTCCCGTACCCGTGATATTGAAAAACGCGACTTT
ACGAAACATATGCTGCGTTTGCGTCGTCACGATCAACTTGACGGAAAAGAAGTGCCGGAAATTATTCTGCTGAACAGTCA
CGACGGTTCAAGCAGTTATAAAATGATCCCGGGCATGTTCCGCCAGATTTGTACTAATGGTCTGGTCGCCTGGAAAAATT
TCGGTGAAATCAGTGTGCCTCACAAAGGGGATATTGTGGAGCAGGTCATCGAGGGCGCTTATACCGTACTGAAAACATTT
GATGCGGTAACGGATAATATCGACATGATGAAAGGGATTCAGCTGAGTGAGCCTGAACAACGTCTGTTGAGTACGGTTGC
CCTGGATTTTAAATATGACGGGAAAAAACCACCAGTGACCCCCGACCAGGTATTACAGTCCCGCCGCTGGGAAGATAAAA
GCCCGGATTTATGGACCACCTTTAACCGTATTCAGGAGAATGTTATCAAAGGCGGGATTAGCGGCAGAACGGCAAAAGGC
CAGCGCACCCGAACACGCGAAGTCACAGGAATCGACGGGGATATTAAATTAAACCAGGCATTGTGGAAAATGGCCGAAGA
ATTCGCAAAACTGAAAGCCTGA

Upstream 100 bases:

>100_bases
TGTGGTTTTTAAACGGTTATCCGGTCGCTGCCGGTGTGCCGTCAGAACATTATTTCCGTGTCATTACCGCGTTAATTAAC
TTTTCTCAGGAGTAAATATT

Downstream 100 bases:

>100_bases
AATTAAGCCGCTCTGATGAGCGGCTTTTTATTGCACAGAATTCATCGCGGCGGTTTTTGATGCCGGTCCGGTTCGATCAT
TTTCTCCGTTCTGGGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MVSFASRYRVPTSIRQNRPLTNDELQRFVPSAFSEDKHDSRSERYTYIPTIVLLDRLRDEGFQPYYATQSRTRDIEKRDF
TKHMLRLRRHDQLDGKEVPEIILLNSHDGSSSYKMIPGMFRQICTNGLVAWKNFGEISVPHKGDIVEQVIEGAYTVLKTF
DAVTDNIDMMKGIQLSEPEQRLLSTVALDFKYDGKKPPVTPDQVLQSRRWEDKSPDLWTTFNRIQENVIKGGISGRTAKG
QRTRTREVTGIDGDIKLNQALWKMAEEFAKLKA

Sequences:

>Translated_273_residues
MVSFASRYRVPTSIRQNRPLTNDELQRFVPSAFSEDKHDSRSERYTYIPTIVLLDRLRDEGFQPYYATQSRTRDIEKRDF
TKHMLRLRRHDQLDGKEVPEIILLNSHDGSSSYKMIPGMFRQICTNGLVAWKNFGEISVPHKGDIVEQVIEGAYTVLKTF
DAVTDNIDMMKGIQLSEPEQRLLSTVALDFKYDGKKPPVTPDQVLQSRRWEDKSPDLWTTFNRIQENVIKGGISGRTAKG
QRTRTREVTGIDGDIKLNQALWKMAEEFAKLKA
>Mature_273_residues
MVSFASRYRVPTSIRQNRPLTNDELQRFVPSAFSEDKHDSRSERYTYIPTIVLLDRLRDEGFQPYYATQSRTRDIEKRDF
TKHMLRLRRHDQLDGKEVPEIILLNSHDGSSSYKMIPGMFRQICTNGLVAWKNFGEISVPHKGDIVEQVIEGAYTVLKTF
DAVTDNIDMMKGIQLSEPEQRLLSTVALDFKYDGKKPPVTPDQVLQSRRWEDKSPDLWTTFNRIQENVIKGGISGRTAKG
QRTRTREVTGIDGDIKLNQALWKMAEEFAKLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=266, Percent_Identity=62.0300751879699, Blast_Score=352, Evalue=1e-98,
Organism=Escherichia coli, GI87081705, Length=268, Percent_Identity=61.1940298507463, Blast_Score=340, Evalue=7e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31527; Mature: 31527

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFASRYRVPTSIRQNRPLTNDELQRFVPSAFSEDKHDSRSERYTYIPTIVLLDRLRDE
CCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHC
GFQPYYATQSRTRDIEKRDFTKHMLRLRRHDQLDGKEVPEIILLNSHDGSSSYKMIPGMF
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
RQICTNGLVAWKNFGEISVPHKGDIVEQVIEGAYTVLKTFDAVTDNIDMMKGIQLSEPEQ
HHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHH
RLLSTVALDFKYDGKKPPVTPDQVLQSRRWEDKSPDLWTTFNRIQENVIKGGISGRTAKG
HHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
QRTRTREVTGIDGDIKLNQALWKMAEEFAKLKA
CCCCCCEECCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSFASRYRVPTSIRQNRPLTNDELQRFVPSAFSEDKHDSRSERYTYIPTIVLLDRLRDE
CCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHC
GFQPYYATQSRTRDIEKRDFTKHMLRLRRHDQLDGKEVPEIILLNSHDGSSSYKMIPGMF
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
RQICTNGLVAWKNFGEISVPHKGDIVEQVIEGAYTVLKTFDAVTDNIDMMKGIQLSEPEQ
HHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHH
RLLSTVALDFKYDGKKPPVTPDQVLQSRRWEDKSPDLWTTFNRIQENVIKGGISGRTAKG
HHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
QRTRTREVTGIDGDIKLNQALWKMAEEFAKLKA
CCCCCCEECCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]