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The map label for this gene is ompA [H]

Identifier: 146284593

GI number: 146284593

Start: 94915

End: 97734

Strand: Direct

Name: ompA [H]

Synonym: Ent638_4267

Alternate gene names: 146284593

Gene position: 94915-97734 (Clockwise)

Preceding gene: 146284592

Following gene: 146284594

Centisome position: 60.17

GC content: 52.41

Gene sequence:

>2820_bases
ATGTCAAAAAATATTACAAATCCAACTGCGATAGACAGACGGAAGGTGCTGGGCCTTTCAATAGGGTCAGCAATTGCGTT
GCTGTCGTCCGCAGAAGTTTATTCAGCATGTATCGCTCTTGGTAATACCGCTACAGTGACTGGAACCACTGGCTGCGTTA
CCTGGTCTGGAGGAAATCTTACACTGACCAATGCTGGAACACTCATTTCAACAGGTGCGGCGCCCGTAACGGCGACATCT
GCAGCGGGAACATTACTCAATAACGGATTGCTAAGTGGCACATCTGCCGCTGGCGTCGAGAACACGGCTAATGCTCTTAT
TGTTCAGAATAACAGTACGATCATCAGTAACACCATCGGGCTTAACAATAACGGAACGATTGTATCGCTGAACAACAATG
CCGGAGGAACGATTTCCGGTTCAGTTGCGGGTGTTAAGAATAACAGTTTCATCATGTCGCTCAGTAATAACAATATCATC
TCCGGTGGTCTGGGCATCAACAATGGTGGCACTTTGGGCTCTCTCGCTAACAGTGGAACCCTCACCGGAACGACGACAGG
AGTTTATAACTCGGGTCTCATCACAAACTTATCCAACAGTGGCTCTCTCTCCGGCACCAGTTATGGCATCCAGTCTGATA
ATGGCAGTCAGATCCTCTCTTTGCAAAATACCAGCACGGGCATTATTGAAGGTGGGACGGGCGTGTTGGTCGGCAATCTA
ACCCCCTCTGGCACGATCAACGTCAACACGTTAACCAATGCTGGCCAGATTTCGGGAACGACTAACGTCGGGGTCGGCAC
CAGCAGCAACGGCACTATCGGGAGCTTAAATAATACGGGTACCCTCGTTGGTAGTCTGGGTGGTGTGGGCAATGCCGGCA
CCATCGGTTCTCTGGTCAACAGTGGTACCATCTCCAGCAGCGGTTATGCCGTTTATAACGCCGGATCCGGTACCTTTGGC
CCGATCACCAACAGCGGCATGATTGCTGGTACCATTTACAATGGTGCCACCCGCAGCATGACCATTAACGGCAGCAACGA
TGCGACCTTCGGTACCCTGACGGGAGCCAGTGGCGGAACCGGTAGTGCGGATATCGGAATGCTCTACAGTACCAGCGCAG
ACCTGTTTTTTGCGTCCGGTAATCTGCTGCTTAATGACAATATTCAGGCCGGCAGCAAAACGGTGAATAACACAGGCGCG
ACCTTACAGGTCAATAACATCCTCAGCATCACCGGCAACTACGTGCAGAGGGCATCTGCAGCCTTGGTAGTCGGTGTTGG
CGATGTCGCAGTGAGCAACGGCGTCTCAGCCGATACCGGCTATGGACGTCTGATTGTCAGTGGTGCTGCCACCATCGACA
ATGGTTCAACGGTGGCACTCAAGTCACTCAATACCTACCGCTTTGCTCCGGGCCAGCGTTATGTGGTTATTACCGCCGCC
CAAAATGGCACCAATTACAATGCCAACAGCTTAAATTACCTGACTTCCGCCTATGAGGGTGTGACAAGCGGATCTGTGGT
TGACAGTGGCAACACGAGCAGTCTGGTGGTTTCTCTGGGTGCAAAAGCGACAGATTCGGGTACAGGTACGCCTGGAGTGC
CGACAAATCCGGGTACAGGTACGCCTGGAGTGCCGACAAATCCGGGTACAGGTACGCCTGGAGGAGGGGAGACTCCAGTC
ACGCCGGGCTTTGCAACTACGGGCAATGCGATATCTTCTCTGAGCGGATTGAAGCAGTACACCGGGATTGCTCCAGGACT
GCTTGATCTCTATAACGCCTCACTGGCCATTGATTCTACTCGTGACGCGAACAAAGTAGGTGAACAGCTCTCTCCCGTAC
AGAACAGCAGCGCCAGCAATGTAGCCTCAGTGGCGACATTTGACGCCGTCGGTGTGGTCGGTCAGCGAGTTGATTCAGTG
CGTCTGGCGCATACACAAGGTATGAGCGGGGTGGCAACCGGTGATGATCCTACCGACTGGGCTGCATGGGGGCAGGTATT
TGGCGGCCATGCTAACCAGGGTATGGTAGATAGTGTCAGTGGGTATAAAGCGAACTACAGCGGGCTGGTACTGGGTGTTG
ACCGGGCTATGGGAGATGCATGGCGGGTCGGTGGTGCACTGACTTACAGTTACACCTCGGTCCATGGCGAAGACAATCTT
TCCGGTAATAAGACGGGAGTTGATTCTTACGGTCTGATTGGCTATGCCAGTTATACCGGTGACCCATGGTACGTGAACCT
GTCTGCCAGCGTCACTCAGCAACGCTACGACACTTCACGTAAAGTTAATATGACGGGTTATTCCGATTCGGCTTGGGGCA
AATTTAACGGTCAGCAGTACGTGACCAAGGCAGAATTCGGTTATCCGCTGGCCGTGGCGGATACCACCACGCTGACGCCT
TTGGCTAACCTGAGTTACAGTTATCAGACACTTGATAGCTATAAAGAAAGCAGCGGAAATGGTTCTGCTCTTTCGGTGGA
AAGTAGCCACAATAACGCGTTCCGTAGTGGATTGGGCGCGAAACTGGAGAAATCATTCCAGACCGGTATTGGCGACATTG
TACCGTATGTTCAGGCAGTGTGGACGCATCAGTATGACTCCAAGCAGAGCACCACGAATGCTAGCTATGCTGCTGATACT
ATTGGAGAAACAAGCTTCACAACCTTCGGTGCGTCGCCCGTTGAAGACACTGCTGATCTCTCCTTGGGTACCACCGTTCT
AAATTCAGATACGCTCAGTGTGACCGCGCGTTATACCGCGCAGTTCGGTGAACAGTATCAGGGGCAGACAGTCAGTCTGC
AGGTACGTAAGCTGTTTTGA

Upstream 100 bases:

>100_bases
CATTAATATTATTCGATTTGAGGCAGCAAACCGCTAACACCAACGCATGACTAATGCTATAAGTAAATTCTTATTAAATT
ATGTTAATGCGGGTTGCTAA

Downstream 100 bases:

>100_bases
TACAACCAAATATAACCCAGCTCCTGAAAGGCCGCAGGAGCTGGGTATAATCGCACTAATGATACATTCTCGAAGCAAGT
GGTGAACCTGCGTGACATGG

Product: outer membrane autotransporter

Products: NA

Alternate protein names: 190 kDa antigen; Cell surface antigen; rOmp A; rOmpA; 120 kDa outer membrane protein OmpA [H]

Number of amino acids: Translated: 939; Mature: 938

Protein sequence:

>939_residues
MSKNITNPTAIDRRKVLGLSIGSAIALLSSAEVYSACIALGNTATVTGTTGCVTWSGGNLTLTNAGTLISTGAAPVTATS
AAGTLLNNGLLSGTSAAGVENTANALIVQNNSTIISNTIGLNNNGTIVSLNNNAGGTISGSVAGVKNNSFIMSLSNNNII
SGGLGINNGGTLGSLANSGTLTGTTTGVYNSGLITNLSNSGSLSGTSYGIQSDNGSQILSLQNTSTGIIEGGTGVLVGNL
TPSGTINVNTLTNAGQISGTTNVGVGTSSNGTIGSLNNTGTLVGSLGGVGNAGTIGSLVNSGTISSSGYAVYNAGSGTFG
PITNSGMIAGTIYNGATRSMTINGSNDATFGTLTGASGGTGSADIGMLYSTSADLFFASGNLLLNDNIQAGSKTVNNTGA
TLQVNNILSITGNYVQRASAALVVGVGDVAVSNGVSADTGYGRLIVSGAATIDNGSTVALKSLNTYRFAPGQRYVVITAA
QNGTNYNANSLNYLTSAYEGVTSGSVVDSGNTSSLVVSLGAKATDSGTGTPGVPTNPGTGTPGVPTNPGTGTPGGGETPV
TPGFATTGNAISSLSGLKQYTGIAPGLLDLYNASLAIDSTRDANKVGEQLSPVQNSSASNVASVATFDAVGVVGQRVDSV
RLAHTQGMSGVATGDDPTDWAAWGQVFGGHANQGMVDSVSGYKANYSGLVLGVDRAMGDAWRVGGALTYSYTSVHGEDNL
SGNKTGVDSYGLIGYASYTGDPWYVNLSASVTQQRYDTSRKVNMTGYSDSAWGKFNGQQYVTKAEFGYPLAVADTTTLTP
LANLSYSYQTLDSYKESSGNGSALSVESSHNNAFRSGLGAKLEKSFQTGIGDIVPYVQAVWTHQYDSKQSTTNASYAADT
IGETSFTTFGASPVEDTADLSLGTTVLNSDTLSVTARYTAQFGEQYQGQTVSLQVRKLF

Sequences:

>Translated_939_residues
MSKNITNPTAIDRRKVLGLSIGSAIALLSSAEVYSACIALGNTATVTGTTGCVTWSGGNLTLTNAGTLISTGAAPVTATS
AAGTLLNNGLLSGTSAAGVENTANALIVQNNSTIISNTIGLNNNGTIVSLNNNAGGTISGSVAGVKNNSFIMSLSNNNII
SGGLGINNGGTLGSLANSGTLTGTTTGVYNSGLITNLSNSGSLSGTSYGIQSDNGSQILSLQNTSTGIIEGGTGVLVGNL
TPSGTINVNTLTNAGQISGTTNVGVGTSSNGTIGSLNNTGTLVGSLGGVGNAGTIGSLVNSGTISSSGYAVYNAGSGTFG
PITNSGMIAGTIYNGATRSMTINGSNDATFGTLTGASGGTGSADIGMLYSTSADLFFASGNLLLNDNIQAGSKTVNNTGA
TLQVNNILSITGNYVQRASAALVVGVGDVAVSNGVSADTGYGRLIVSGAATIDNGSTVALKSLNTYRFAPGQRYVVITAA
QNGTNYNANSLNYLTSAYEGVTSGSVVDSGNTSSLVVSLGAKATDSGTGTPGVPTNPGTGTPGVPTNPGTGTPGGGETPV
TPGFATTGNAISSLSGLKQYTGIAPGLLDLYNASLAIDSTRDANKVGEQLSPVQNSSASNVASVATFDAVGVVGQRVDSV
RLAHTQGMSGVATGDDPTDWAAWGQVFGGHANQGMVDSVSGYKANYSGLVLGVDRAMGDAWRVGGALTYSYTSVHGEDNL
SGNKTGVDSYGLIGYASYTGDPWYVNLSASVTQQRYDTSRKVNMTGYSDSAWGKFNGQQYVTKAEFGYPLAVADTTTLTP
LANLSYSYQTLDSYKESSGNGSALSVESSHNNAFRSGLGAKLEKSFQTGIGDIVPYVQAVWTHQYDSKQSTTNASYAADT
IGETSFTTFGASPVEDTADLSLGTTVLNSDTLSVTARYTAQFGEQYQGQTVSLQVRKLF
>Mature_938_residues
SKNITNPTAIDRRKVLGLSIGSAIALLSSAEVYSACIALGNTATVTGTTGCVTWSGGNLTLTNAGTLISTGAAPVTATSA
AGTLLNNGLLSGTSAAGVENTANALIVQNNSTIISNTIGLNNNGTIVSLNNNAGGTISGSVAGVKNNSFIMSLSNNNIIS
GGLGINNGGTLGSLANSGTLTGTTTGVYNSGLITNLSNSGSLSGTSYGIQSDNGSQILSLQNTSTGIIEGGTGVLVGNLT
PSGTINVNTLTNAGQISGTTNVGVGTSSNGTIGSLNNTGTLVGSLGGVGNAGTIGSLVNSGTISSSGYAVYNAGSGTFGP
ITNSGMIAGTIYNGATRSMTINGSNDATFGTLTGASGGTGSADIGMLYSTSADLFFASGNLLLNDNIQAGSKTVNNTGAT
LQVNNILSITGNYVQRASAALVVGVGDVAVSNGVSADTGYGRLIVSGAATIDNGSTVALKSLNTYRFAPGQRYVVITAAQ
NGTNYNANSLNYLTSAYEGVTSGSVVDSGNTSSLVVSLGAKATDSGTGTPGVPTNPGTGTPGVPTNPGTGTPGGGETPVT
PGFATTGNAISSLSGLKQYTGIAPGLLDLYNASLAIDSTRDANKVGEQLSPVQNSSASNVASVATFDAVGVVGQRVDSVR
LAHTQGMSGVATGDDPTDWAAWGQVFGGHANQGMVDSVSGYKANYSGLVLGVDRAMGDAWRVGGALTYSYTSVHGEDNLS
GNKTGVDSYGLIGYASYTGDPWYVNLSASVTQQRYDTSRKVNMTGYSDSAWGKFNGQQYVTKAEFGYPLAVADTTTLTPL
ANLSYSYQTLDSYKESSGNGSALSVESSHNNAFRSGLGAKLEKSFQTGIGDIVPYVQAVWTHQYDSKQSTTNASYAADTI
GETSFTTFGASPVEDTADLSLGTTVLNSDTLSVTARYTAQFGEQYQGQTVSLQVRKLF

Specific function: Elicits protective immunity [H]

COG id: COG4625

COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain

Gene ontology:

Cell location: 32 kDa beta peptide:Cell outer membrane; Multi-pass membrane protein (Potential). Note=The cleaved C- terminal fragment (autotransporter domain) is localized in the outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 94275; Mature: 94144

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNITNPTAIDRRKVLGLSIGSAIALLSSAEVYSACIALGNTATVTGTTGCVTWSGGNL
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCE
TLTNAGTLISTGAAPVTATSAAGTLLNNGLLSGTSAAGVENTANALIVQNNSTIISNTIG
EEECCCCEEECCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE
LNNNGTIVSLNNNAGGTISGSVAGVKNNSFIMSLSNNNIISGGLGINNGGTLGSLANSGT
ECCCCEEEEECCCCCCEEECEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCE
LTGTTTGVYNSGLITNLSNSGSLSGTSYGIQSDNGSQILSLQNTSTGIIEGGTGVLVGNL
EEEEECCEECCCEEEECCCCCCCCCCEECEECCCCCEEEEEECCCCEEEECCCEEEEECC
TPSGTINVNTLTNAGQISGTTNVGVGTSSNGTIGSLNNTGTLVGSLGGVGNAGTIGSLVN
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCHHHHHC
SGTISSSGYAVYNAGSGTFGPITNSGMIAGTIYNGATRSMTINGSNDATFGTLTGASGGT
CCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCC
GSADIGMLYSTSADLFFASGNLLLNDNIQAGSKTVNNTGATLQVNNILSITGNYVQRASA
CCCCEEEEEECCCCEEEECCCEEEECCCCCCCCEECCCCCEEEECCEEEECCHHHHHCCE
ALVVGVGDVAVSNGVSADTGYGRLIVSGAATIDNGSTVALKSLNTYRFAPGQRYVVITAA
EEEEEECCEEECCCCCCCCCCCEEEEECCEEECCCCEEEEEECCEEEECCCCEEEEEEEE
QNGTNYNANSLNYLTSAYEGVTSGSVVDSGNTSSLVVSLGAKATDSGTGTPGVPTNPGTG
CCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
TPGVPTNPGTGTPGGGETPVTPGFATTGNAISSLSGLKQYTGIAPGLLDLYNASLAIDST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECC
RDANKVGEQLSPVQNSSASNVASVATFDAVGVVGQRVDSVRLAHTQGMSGVATGDDPTDW
CCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCHH
AAWGQVFGGHANQGMVDSVSGYKANYSGLVLGVDRAMGDAWRVGGALTYSYTSVHGEDNL
HHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEECHHCCCCEECCCEEEEEEEEECCCCCC
SGNKTGVDSYGLIGYASYTGDPWYVNLSASVTQQRYDTSRKVNMTGYSDSAWGKFNGQQY
CCCCCCCCCCCEEEEEEECCCEEEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEE
VTKAEFGYPLAVADTTTLTPLANLSYSYQTLDSYKESSGNGSALSVESSHNNAFRSGLGA
EEEECCCCEEEEECCCEECCHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCH
KLEKSFQTGIGDIVPYVQAVWTHQYDSKQSTTNASYAADTIGETSFTTFGASPVEDTADL
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCC
SLGTTVLNSDTLSVTARYTAQFGEQYQGQTVSLQVRKLF
EECEEEECCCCEEEEEEEHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure 
SKNITNPTAIDRRKVLGLSIGSAIALLSSAEVYSACIALGNTATVTGTTGCVTWSGGNL
CCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCE
TLTNAGTLISTGAAPVTATSAAGTLLNNGLLSGTSAAGVENTANALIVQNNSTIISNTIG
EEECCCCEEECCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE
LNNNGTIVSLNNNAGGTISGSVAGVKNNSFIMSLSNNNIISGGLGINNGGTLGSLANSGT
ECCCCEEEEECCCCCCEEECEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCE
LTGTTTGVYNSGLITNLSNSGSLSGTSYGIQSDNGSQILSLQNTSTGIIEGGTGVLVGNL
EEEEECCEECCCEEEECCCCCCCCCCEECEECCCCCEEEEEECCCCEEEECCCEEEEECC
TPSGTINVNTLTNAGQISGTTNVGVGTSSNGTIGSLNNTGTLVGSLGGVGNAGTIGSLVN
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCHHHHHC
SGTISSSGYAVYNAGSGTFGPITNSGMIAGTIYNGATRSMTINGSNDATFGTLTGASGGT
CCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCC
GSADIGMLYSTSADLFFASGNLLLNDNIQAGSKTVNNTGATLQVNNILSITGNYVQRASA
CCCCEEEEEECCCCEEEECCCEEEECCCCCCCCEECCCCCEEEECCEEEECCHHHHHCCE
ALVVGVGDVAVSNGVSADTGYGRLIVSGAATIDNGSTVALKSLNTYRFAPGQRYVVITAA
EEEEEECCEEECCCCCCCCCCCEEEEECCEEECCCCEEEEEECCEEEECCCCEEEEEEEE
QNGTNYNANSLNYLTSAYEGVTSGSVVDSGNTSSLVVSLGAKATDSGTGTPGVPTNPGTG
CCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
TPGVPTNPGTGTPGGGETPVTPGFATTGNAISSLSGLKQYTGIAPGLLDLYNASLAIDST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECC
RDANKVGEQLSPVQNSSASNVASVATFDAVGVVGQRVDSVRLAHTQGMSGVATGDDPTDW
CCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCHH
AAWGQVFGGHANQGMVDSVSGYKANYSGLVLGVDRAMGDAWRVGGALTYSYTSVHGEDNL
HHHHHHHCCCCCCCCEECCCCCCCCCCEEEEEECHHCCCCEECCCEEEEEEEEECCCCCC
SGNKTGVDSYGLIGYASYTGDPWYVNLSASVTQQRYDTSRKVNMTGYSDSAWGKFNGQQY
CCCCCCCCCCCEEEEEEECCCEEEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEE
VTKAEFGYPLAVADTTTLTPLANLSYSYQTLDSYKESSGNGSALSVESSHNNAFRSGLGA
EEEECCCCEEEEECCCEECCHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCH
KLEKSFQTGIGDIVPYVQAVWTHQYDSKQSTTNASYAADTIGETSFTTFGASPVEDTADL
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCC
SLGTTVLNSDTLSVTARYTAQFGEQYQGQTVSLQVRKLF
EECEEEECCCCEEEEEEEHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125327; 11557893; 8862558 [H]