Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301487
Identifier: 145301487
GI number: 145301487
Start: 104229
End: 104693
Strand: Reverse
Name: 145301487
Synonym: ASA_P5G108
Alternate gene names: NA
Gene position: 104693-104229 (Counterclockwise)
Preceding gene: 145301488
Following gene: 145301486
Centisome position: 67.5
GC content: 47.53
Gene sequence:
>465_bases ATGAGTCGCAAGCAGGGCAAATCAGTCGAGCTTAATCCCGCCTTTGAGACCGGAACGCTGAATGATGGCGTTTTTGTCGA TTTCCCTTTTCTTGAACCAGAACAAGTGAGTGCTTTGGTTACATTCATGACGAACGTGGGCCAAGGCAAACCGCTATCTG GGAAAAACAAGCCCTCTTGGCAGGATAACGGCGGCAACACCCTCCCCTATTGCGAAAGTTATAAGGCTGATAATTATTGG CACTATCACTGTGGCCCTAGCTATTCGCGACACTCAAACTACAGCTTTACATTTGACTTGGGGCTGAACCTTTATGGCCT TACCAGTGCGGAAGTGATCCACTACCGTAAGAAAGGTGAACAGAAGGTGATCATTGAGGGGTTCATGAAGATCCATGAGC CTTTCCCCAGGTCTAATGATCCCGATAAAGAAAACCCGTTGTTTCCTGATCCTGTTGACGATTGA
Upstream 100 bases:
>100_bases AGTCGCCGCTCCATTGTGAACAATCCGGTGGATACCTCTGGGACTCACGATGAACTTCTTGCTAAAATGATGGCCCGTCA GCATCAGATCAGGGCCATAC
Downstream 100 bases:
>100_bases AACATTGCTCAAGCCCCGCACATGCGGGGTTTTTGCTTTCTGGGCCAACGGCCAGAGTGCCAGGGAAAACCGGCTATCCA GGGCGGCGGGGAGCCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSRKQGKSVELNPAFETGTLNDGVFVDFPFLEPEQVSALVTFMTNVGQGKPLSGKNKPSWQDNGGNTLPYCESYKADNYW HYHCGPSYSRHSNYSFTFDLGLNLYGLTSAEVIHYRKKGEQKVIIEGFMKIHEPFPRSNDPDKENPLFPDPVDD
Sequences:
>Translated_154_residues MSRKQGKSVELNPAFETGTLNDGVFVDFPFLEPEQVSALVTFMTNVGQGKPLSGKNKPSWQDNGGNTLPYCESYKADNYW HYHCGPSYSRHSNYSFTFDLGLNLYGLTSAEVIHYRKKGEQKVIIEGFMKIHEPFPRSNDPDKENPLFPDPVDD >Mature_153_residues SRKQGKSVELNPAFETGTLNDGVFVDFPFLEPEQVSALVTFMTNVGQGKPLSGKNKPSWQDNGGNTLPYCESYKADNYWH YHCGPSYSRHSNYSFTFDLGLNLYGLTSAEVIHYRKKGEQKVIIEGFMKIHEPFPRSNDPDKENPLFPDPVDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17457; Mature: 17325
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKQGKSVELNPAFETGTLNDGVFVDFPFLEPEQVSALVTFMTNVGQGKPLSGKNKPSW CCCCCCCEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC QDNGGNTLPYCESYKADNYWHYHCGPSYSRHSNYSFTFDLGLNLYGLTSAEVIHYRKKGE CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCHHHHHHEHHCCC QKVIIEGFMKIHEPFPRSNDPDKENPLFPDPVDD EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRKQGKSVELNPAFETGTLNDGVFVDFPFLEPEQVSALVTFMTNVGQGKPLSGKNKPSW CCCCCCEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC QDNGGNTLPYCESYKADNYWHYHCGPSYSRHSNYSFTFDLGLNLYGLTSAEVIHYRKKGE CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCHHHHHHEHHCCC QKVIIEGFMKIHEPFPRSNDPDKENPLFPDPVDD EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA