Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is traA [C]
Identifier: 145301408
GI number: 145301408
Start: 22598
End: 22909
Strand: Direct
Name: traA [C]
Synonym: ASA_P5G024
Alternate gene names: 145301408
Gene position: 22598-22909 (Clockwise)
Preceding gene: 145301407
Following gene: 145301409
Centisome position: 14.57
GC content: 51.6
Gene sequence:
>312_bases ATGAATGTAGCTCTTCAAGAACGGACACAACTCAACCCAAAACACCTGTTGCGGGTCATGGCACTCATGGCGGTCGCGGT CCTGGTGACCCTGCTTACCTTCGGTCAGGCTCATGCTGTCGACATGCTGGCTGGGCAATCAGGTACCGTCAACGATACCT TTGGGGCCAACTCGACCGTCGCCAAGTGGATCATTTTGGCTGAAGTAATTATCGGGGTTGCCTCCTATATCAAAACCAAA AACCTGCTGCTGCTGTTTGGTGTCATTATCGTGGTTGTATTCACCACTGTTGGCTTCCAGTTGGCCGCATAA
Upstream 100 bases:
>100_bases CAAATGATTAGTCGCCCAGATACAAGACTCTGGTTATCGGGAGTCTTGTATCGGTGCGATTAATGCACCGAACATAACAA TTCACATGGAGAATTTTTGT
Downstream 100 bases:
>100_bases TATCGGGTGGCACTATGCAATCGGAAGACAGTATTAATAAATACCGCTTTCCGAAAACCTTGAGTGAACAGCGTCGCTTC CTCGGATTACCGTATGACGA
Product: TraA fimbrial protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNVALQERTQLNPKHLLRVMALMAVAVLVTLLTFGQAHAVDMLAGQSGTVNDTFGANSTVAKWIILAEVIIGVASYIKTK NLLLLFGVIIVVVFTTVGFQLAA
Sequences:
>Translated_103_residues MNVALQERTQLNPKHLLRVMALMAVAVLVTLLTFGQAHAVDMLAGQSGTVNDTFGANSTVAKWIILAEVIIGVASYIKTK NLLLLFGVIIVVVFTTVGFQLAA >Mature_103_residues MNVALQERTQLNPKHLLRVMALMAVAVLVTLLTFGQAHAVDMLAGQSGTVNDTFGANSTVAKWIILAEVIIGVASYIKTK NLLLLFGVIIVVVFTTVGFQLAA
Specific function: Propilin Is The Precursor Of The Sexpilus Subunit. The Sexpilus Are Filamentous Surface Appendages Required For Cell-To- Cell Contact During Bacterial Conjugation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10995; Mature: 10995
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVALQERTQLNPKHLLRVMALMAVAVLVTLLTFGQAHAVDMLAGQSGTVNDTFGANSTV CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHH AKWIILAEVIIGVASYIKTKNLLLLFGVIIVVVFTTVGFQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVALQERTQLNPKHLLRVMALMAVAVLVTLLTFGQAHAVDMLAGQSGTVNDTFGANSTV CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHH AKWIILAEVIIGVASYIKTKNLLLLFGVIIVVVFTTVGFQLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA