Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301397
Identifier: 145301397
GI number: 145301397
Start: 11994
End: 12296
Strand: Direct
Name: 145301397
Synonym: ASA_P5G012
Alternate gene names: NA
Gene position: 11994-12296 (Clockwise)
Preceding gene: 145301396
Following gene: 145301398
Centisome position: 7.73
GC content: 48.84
Gene sequence:
>303_bases ATGGACAGCAAACTGAAATTGCCAGCATTGAAGGTCGCAAGATGGGCGTTCAAACATGGTGAGTTCTTCGACCTTTACGA TGTGTCCTATCTGCTTGGGATACCATCCAGCGATGCAAGCAAAGTGGTGCTCTATCTGAGATCGTTGAGCTATGTGGATA AATTGGCCGAGACTCGATGTTGCAAACCGGAACCAGGGCGAATGGCACGTCGCCGAGTCTTTATCAAAGTTCTGGCCATT TATCCGGAGCCCACAAAAGCGCAGGCTCCGGTGTTCAATTCAAAAATTGCCGGAGGCAAATAA
Upstream 100 bases:
>100_bases CCCAAGGCAGAACAGAGCCCAGCGTATGATCAAGCCGTTGACTAAGACTGACGCCAAGCACGCCATTGTTGTGATACTGC GTTGATAAGGATAGGACTCA
Downstream 100 bases:
>100_bases TCCGGCCTAAGTCAGAGGAAAAATGATGAACGGGTTAGCCCGAAATGCAAAAGGGCATTGGGTAGCCACCCACATGGGCC AGCGCGTAACCTTCACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDSKLKLPALKVARWAFKHGEFFDLYDVSYLLGIPSSDASKVVLYLRSLSYVDKLAETRCCKPEPGRMARRRVFIKVLAI YPEPTKAQAPVFNSKIAGGK
Sequences:
>Translated_100_residues MDSKLKLPALKVARWAFKHGEFFDLYDVSYLLGIPSSDASKVVLYLRSLSYVDKLAETRCCKPEPGRMARRRVFIKVLAI YPEPTKAQAPVFNSKIAGGK >Mature_100_residues MDSKLKLPALKVARWAFKHGEFFDLYDVSYLLGIPSSDASKVVLYLRSLSYVDKLAETRCCKPEPGRMARRRVFIKVLAI YPEPTKAQAPVFNSKIAGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11264; Mature: 11264
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKLKLPALKVARWAFKHGEFFDLYDVSYLLGIPSSDASKVVLYLRSLSYVDKLAETRC CCCCCCCCHHHHHHHHHCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC CKPEPGRMARRRVFIKVLAIYPEPTKAQAPVFNSKIAGGK CCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDSKLKLPALKVARWAFKHGEFFDLYDVSYLLGIPSSDASKVVLYLRSLSYVDKLAETRC CCCCCCCCHHHHHHHHHCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC CKPEPGRMARRRVFIKVLAIYPEPTKAQAPVFNSKIAGGK CCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA