Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301392
Identifier: 145301392
GI number: 145301392
Start: 5525
End: 6787
Strand: Reverse
Name: 145301392
Synonym: ASA_P5G007
Alternate gene names: NA
Gene position: 6787-5525 (Counterclockwise)
Preceding gene: 145301393
Following gene: 145301391
Centisome position: 4.38
GC content: 56.22
Gene sequence:
>1263_bases ATGACTATTATCGATGCCAACCACTATATCAATCAACTACTCACTCCCGCCGAGACCGAGTGCATTGCCCGCCTCTGCAA GTTTTGCCTGCGTCTACGCGCCATTACCCCCTGGATGCTGGTCACCTCCCTGCTACGCGCTTTCGGGGGCGGCAAGGTCG GTGCGATTGCCTGCTTGCACCAGCATTTCAATGGCTTGCAGCTCGCACATACTCACCAGGTCTCCTACAAACCCTTTCAC AACCAGTTGCGTAAACCCGCGTTTGCCCAATTTATGAAGGCCCTGGTTGAGCGAGCGATTGCCCTGCGCATCGGCCAGCA GGTGACTGACGTTGCCCAGGGCGCTTTCAAGCAGGTGCTGCTTCAGGATGGCACCTCTTTTGCGGTCCACAAGCGTCTTG CCACGGTCTTTCCCGGGCGATTCAAGACCATCAGTCCCGCCGCCATTGAGTGCCACATGACCATGTCACTGCTGGAGCAA AAACCGCTCTGTATGCAGCTCTCAGCCGACACCGCATCAGAGCGCCAGTTTCTCCCGGATGCCAAAAAGCTGACCGGCAG CCTGCTGCTGGCGGATGCGGGTTACATTGACCGCGCCTATTTTGCCGAGGTGAACAAGGCCGGCTGCTTCTATCTGGTGC GGGGCAGAAAAGGGTTGAACCCGAAGATCCTCCGCGCCTGGCGAGATGATGGGCGTGCCGTGGAAAAGCTGACAGGCATG TCGCTTAAAGAAGAGGGACGGCGGCACTGCCGGGCAGAAGTACTTGATATGGATGTAAAATCAGGCAAGTACGAGTATCG GCTGATCCGGCGCTGGTTCGCCGAGGAGACGCGATTCTGCGTCTGGATGACTAACTTGGCACGAGAGACATGGCCAGCAG AGCGGGTGATGCGTCTGTATCGCTGCCGCTGGCAGGTCGAGTTGCTGTTCAAGGAGCGGAAATCGTACAACAACCTCAAG GGTTTTGTGACGGGTCAAAAAGCGATCACCGAGGGGCTGGTGTGGGACAGTTTGCTGTCACTGGTGTTGAAGCGACGAGT GGCTCAGACCCTGGTGAAAGAGGGATTATCCACACTGAAGGCCGCAAAGAGCGGCATGACGTGGTGGCTGCCGATATTGG AAGCGGTAGCGCACCGGGCCCTCAGTGAAATAAGGGAGAAGCTGGAATGGGTCGTCGATTTTCTGTCAAAAAACGCTCGC AGGACAAAGCAGCGAAAATCTATACAAAACAGGACCTTGGAAGGGATTTTAATGAGCCTGTAA
Upstream 100 bases:
>100_bases ATACAGGATCTTTAGCAGCAACCAATTGAAATATATATATGAAAAAGGCTTCGTTTGTGATCTGATTTTATCGCCAAACA AAACTGCCACGCCCGAAGCC
Downstream 100 bases:
>100_bases ATCCAATTGTGTAACCGCCCACGAATAAGTAATTTTTTCAAAAGGATACCTTCGTGGGTAAGCAAATGGACCAAGACAAA CTCAAAGCACTGGCCGCTGA
Product: IS element transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISH8-Type Transposase; IS Element Transposase; Transposase Is4 Family
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTIIDANHYINQLLTPAETECIARLCKFCLRLRAITPWMLVTSLLRAFGGGKVGAIACLHQHFNGLQLAHTHQVSYKPFH NQLRKPAFAQFMKALVERAIALRIGQQVTDVAQGAFKQVLLQDGTSFAVHKRLATVFPGRFKTISPAAIECHMTMSLLEQ KPLCMQLSADTASERQFLPDAKKLTGSLLLADAGYIDRAYFAEVNKAGCFYLVRGRKGLNPKILRAWRDDGRAVEKLTGM SLKEEGRRHCRAEVLDMDVKSGKYEYRLIRRWFAEETRFCVWMTNLARETWPAERVMRLYRCRWQVELLFKERKSYNNLK GFVTGQKAITEGLVWDSLLSLVLKRRVAQTLVKEGLSTLKAAKSGMTWWLPILEAVAHRALSEIREKLEWVVDFLSKNAR RTKQRKSIQNRTLEGILMSL
Sequences:
>Translated_420_residues MTIIDANHYINQLLTPAETECIARLCKFCLRLRAITPWMLVTSLLRAFGGGKVGAIACLHQHFNGLQLAHTHQVSYKPFH NQLRKPAFAQFMKALVERAIALRIGQQVTDVAQGAFKQVLLQDGTSFAVHKRLATVFPGRFKTISPAAIECHMTMSLLEQ KPLCMQLSADTASERQFLPDAKKLTGSLLLADAGYIDRAYFAEVNKAGCFYLVRGRKGLNPKILRAWRDDGRAVEKLTGM SLKEEGRRHCRAEVLDMDVKSGKYEYRLIRRWFAEETRFCVWMTNLARETWPAERVMRLYRCRWQVELLFKERKSYNNLK GFVTGQKAITEGLVWDSLLSLVLKRRVAQTLVKEGLSTLKAAKSGMTWWLPILEAVAHRALSEIREKLEWVVDFLSKNAR RTKQRKSIQNRTLEGILMSL >Mature_419_residues TIIDANHYINQLLTPAETECIARLCKFCLRLRAITPWMLVTSLLRAFGGGKVGAIACLHQHFNGLQLAHTHQVSYKPFHN QLRKPAFAQFMKALVERAIALRIGQQVTDVAQGAFKQVLLQDGTSFAVHKRLATVFPGRFKTISPAAIECHMTMSLLEQK PLCMQLSADTASERQFLPDAKKLTGSLLLADAGYIDRAYFAEVNKAGCFYLVRGRKGLNPKILRAWRDDGRAVEKLTGMS LKEEGRRHCRAEVLDMDVKSGKYEYRLIRRWFAEETRFCVWMTNLARETWPAERVMRLYRCRWQVELLFKERKSYNNLKG FVTGQKAITEGLVWDSLLSLVLKRRVAQTLVKEGLSTLKAAKSGMTWWLPILEAVAHRALSEIREKLEWVVDFLSKNARR TKQRKSIQNRTLEGILMSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48072; Mature: 47941
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIDANHYINQLLTPAETECIARLCKFCLRLRAITPWMLVTSLLRAFGGGKVGAIACLH CEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH QHFNGLQLAHTHQVSYKPFHNQLRKPAFAQFMKALVERAIALRIGQQVTDVAQGAFKQVL HHCCCCEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQDGTSFAVHKRLATVFPGRFKTISPAAIECHMTMSLLEQKPLCMQLSADTASERQFLPD HHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCC AKKLTGSLLLADAGYIDRAYFAEVNKAGCFYLVRGRKGLNPKILRAWRDDGRAVEKLTGM HHHHHHHHHEECCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCC SLKEEGRRHCRAEVLDMDVKSGKYEYRLIRRWFAEETRFCVWMTNLARETWPAERVMRLY CHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHCCCHHHHHHHH RCRWQVELLFKERKSYNNLKGFVTGQKAITEGLVWDSLLSLVLKRRVAQTLVKEGLSTLK HHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKSGMTWWLPILEAVAHRALSEIREKLEWVVDFLSKNARRTKQRKSIQNRTLEGILMSL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIIDANHYINQLLTPAETECIARLCKFCLRLRAITPWMLVTSLLRAFGGGKVGAIACLH EEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH QHFNGLQLAHTHQVSYKPFHNQLRKPAFAQFMKALVERAIALRIGQQVTDVAQGAFKQVL HHCCCCEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQDGTSFAVHKRLATVFPGRFKTISPAAIECHMTMSLLEQKPLCMQLSADTASERQFLPD HHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCC AKKLTGSLLLADAGYIDRAYFAEVNKAGCFYLVRGRKGLNPKILRAWRDDGRAVEKLTGM HHHHHHHHHEECCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCC SLKEEGRRHCRAEVLDMDVKSGKYEYRLIRRWFAEETRFCVWMTNLARETWPAERVMRLY CHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHCCCHHHHHHHH RCRWQVELLFKERKSYNNLKGFVTGQKAITEGLVWDSLLSLVLKRRVAQTLVKEGLSTLK HHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKSGMTWWLPILEAVAHRALSEIREKLEWVVDFLSKNARRTKQRKSIQNRTLEGILMSL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA