| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299884
Identifier: 145299884
GI number: 145299884
Start: 3203004
End: 3203762
Strand: Direct
Name: 145299884
Synonym: ASA_2975
Alternate gene names: NA
Gene position: 3203004-3203762 (Clockwise)
Preceding gene: 145299883
Following gene: 145299885
Centisome position: 68.11
GC content: 57.31
Gene sequence:
>759_bases ATGCTGGTTCAGCTTTGGCTCGCTGCGGCACTTGCCGGATCAAACATGACAGCCTGTGGTCACCATGACTATCCCCCGTG GAACTGGCATGCGGGCGGTAAAATCGTGGGTGTCTGCGCCGAAGTAGTGAGCACCCTCTTTCAACGACTGGGGCTCAACG TTAACCTTGACTACGTAGGCCCCTGGGCCCGTTGCCAGCAAAAGGTGGCCTCCGGCGAGGTAGACATCAATATTTGCGCC CTGCGCAACGGCGAGCGTGAAAGCTACTCACGCTTCACGCAAACACCGATGGCCATCAATGACATGGCCGTGTTTGTTCG CCAGCCCAGCCCTCGTCTCTTGGAGCAACGGGAGGATCTGGCCGGGCTAAGGGGAGCCATGATGATCGGGGTCAGCCTTG GCAGCGAGCTGGACACTTTTCTGGAAGAGAATACCCGGATCCACAGGGTCAACTCCCTCAAGCAGGTCTTTGGGCTGCTG GCCAGCGACAGGGTCGACTTTGTGCCCTACGGTCGCTCTTCTGGTCGCCTCTTTTTACGGGAAAATTACCCGGATAGCGG TCTGGCCGATCTGCTCTGGCCCCTGCAACAGGGAGAACTCTACATCTCTGTGTCCCTCAACTCCCCCCACCTCGATACCC TGGAGAAACTCGAACCCATGTTGCAGGCCCCAGGTATGAGTCAGTGGATAGATCAACTGCTGGACAAATACAGCACCCTC TATCTGGAACAGCAACGACAGACTCAGCAGATGCCTTGA
Upstream 100 bases:
>100_bases TGGTATTTGCTCAAACGCCTTCGCTCTGCGAGGGCGTTTTTATTCAAATCAACTCGGCTCAATCACCTAAACTCTGGGAG ATTTGAGGGGGAGTATTTCT
Downstream 100 bases:
>100_bases CCTTCTCCCGCGAGTAAGGTTTAGATTTGCCCCATCCCTTGCCAGAGTTGACACATGATGAGTTTGGTTAGATTGCCCAC CCTACTATTGGCCCGGCTTT
Product: periplasmic amino acid-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MLVQLWLAAALAGSNMTACGHHDYPPWNWHAGGKIVGVCAEVVSTLFQRLGLNVNLDYVGPWARCQQKVASGEVDINICA LRNGERESYSRFTQTPMAINDMAVFVRQPSPRLLEQREDLAGLRGAMMIGVSLGSELDTFLEENTRIHRVNSLKQVFGLL ASDRVDFVPYGRSSGRLFLRENYPDSGLADLLWPLQQGELYISVSLNSPHLDTLEKLEPMLQAPGMSQWIDQLLDKYSTL YLEQQRQTQQMP
Sequences:
>Translated_252_residues MLVQLWLAAALAGSNMTACGHHDYPPWNWHAGGKIVGVCAEVVSTLFQRLGLNVNLDYVGPWARCQQKVASGEVDINICA LRNGERESYSRFTQTPMAINDMAVFVRQPSPRLLEQREDLAGLRGAMMIGVSLGSELDTFLEENTRIHRVNSLKQVFGLL ASDRVDFVPYGRSSGRLFLRENYPDSGLADLLWPLQQGELYISVSLNSPHLDTLEKLEPMLQAPGMSQWIDQLLDKYSTL YLEQQRQTQQMP >Mature_252_residues MLVQLWLAAALAGSNMTACGHHDYPPWNWHAGGKIVGVCAEVVSTLFQRLGLNVNLDYVGPWARCQQKVASGEVDINICA LRNGERESYSRFTQTPMAINDMAVFVRQPSPRLLEQREDLAGLRGAMMIGVSLGSELDTFLEENTRIHRVNSLKQVFGLL ASDRVDFVPYGRSSGRLFLRENYPDSGLADLLWPLQQGELYISVSLNSPHLDTLEKLEPMLQAPGMSQWIDQLLDKYSTL YLEQQRQTQQMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28339; Mature: 28339
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVQLWLAAALAGSNMTACGHHDYPPWNWHAGGKIVGVCAEVVSTLFQRLGLNVNLDYVG CHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC PWARCQQKVASGEVDINICALRNGERESYSRFTQTPMAINDMAVFVRQPSPRLLEQREDL CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHH AGLRGAMMIGVSLGSELDTFLEENTRIHRVNSLKQVFGLLASDRVDFVPYGRSSGRLFLR HHHHHHHEEEHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE ENYPDSGLADLLWPLQQGELYISVSLNSPHLDTLEKLEPMLQAPGMSQWIDQLLDKYSTL CCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YLEQQRQTQQMP HHHHHHHHCCCC >Mature Secondary Structure MLVQLWLAAALAGSNMTACGHHDYPPWNWHAGGKIVGVCAEVVSTLFQRLGLNVNLDYVG CHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC PWARCQQKVASGEVDINICALRNGERESYSRFTQTPMAINDMAVFVRQPSPRLLEQREDL CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHH AGLRGAMMIGVSLGSELDTFLEENTRIHRVNSLKQVFGLLASDRVDFVPYGRSSGRLFLR HHHHHHHEEEHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE ENYPDSGLADLLWPLQQGELYISVSLNSPHLDTLEKLEPMLQAPGMSQWIDQLLDKYSTL CCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YLEQQRQTQQMP HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA