| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299872
Identifier: 145299872
GI number: 145299872
Start: 3186868
End: 3188793
Strand: Direct
Name: 145299872
Synonym: ASA_2962
Alternate gene names: NA
Gene position: 3186868-3188793 (Clockwise)
Preceding gene: 145299865
Following gene: 145299873
Centisome position: 67.77
GC content: 62.36
Gene sequence:
>1926_bases ATGAGTATCACACGCAGAGACTTTCTCAACGGCGTAGCCATCACCATAGCGGCAGGCATCGCCCCCATCAATCTGTTGCA GGCGGCAGAGGGCGGCAAGGCGCTGGCCGACAAGACGCTTGCCTATCCGCCCGCCCTCACAGGGTTGCGCGGCAACCACC CGGGCTCCTTTGAACCGGCCCACAGCATAGCCCGCGACGGCAAGCAGTATGACTTCGCCAATGTTCCCCTCGAGGGGGAG TACGATCTGGTGATCGTCGGCGCCGGGATCAGCGGTCTGGCCGCCGCCTGCTTCTATCAACAGTTGCTCGGCGCGGATAA AAAGATCCTGCTGCTCGACAACCACGACGACTTTGGCGGCCACGCCAAGCGCAACGAATTCACCACGCCCGATGGCCTGC GGCTGGGTTACGGCGGCAGCGAATCCCTGCAATCGCCGCGCTCCGTCTACAGCCCCATCGCGCTCGGCCTGCTCAAGACG CTCGAGGTGAACATCGACGAACTGGCCGCCGGCTTCCAGCAGACCTTCTATCCGGATCTGGGCCTGAGCCGCGGCGTCTA CTTCGACGAGAAGCACTTTGGCGTCAACAAGGTGGTGAGCGGTGACCCTGGCCACAACGTGGCCGACGACATCCCCCGGG ATCGCCTCAACGGCCGCCCCCTGGCCGAATTCATCGGTGACTTCCCGCTCGATGAGCGCGACCGTGCAGCCTTGCTGGCC CTGCACGAAGAGAAGATCGACTACCTCAGTGGCATGAGCCGGGAGGAGAAAGACCTCTGGATGACCCGCAACAGCTACAC CAGCTTCCTGCGAGACAAGGTGGGCCTGAGCGAGCGTGCAATCACTTACTTCCAGCAGCGCACCAACGACTTCCAGGCAG TCGGTATCGATGCCACCGCCTGCGCCGATGCGCGCCTCTGTGCCCTGCCTGGCTTCGACGGGCTGGATCTCACTCCTCTC GATGCCGAGGAGCAGGCAGAGCTGGACGATCCCTACATCTTCCACTTCCCGGATGGCAACGCCGGCCTCACCCGCCTGAT GGTACGCAAGCTGATCCCTCAGGTGGCGCCGGGCCACACCATGCAGGATGTGGTACTGGCCAAGTTTGACTACGGCAAGC TCGATCTGCCGGAACACAAGGTGCAACTGCGCCTTGGCAGCACGGCGCTGCAGGCGAAGAACATCCGCCGCACCGATGGC AGCACTGGGGTGGATGTCACCTACATCAAGGAGGGCAAACTCCATAGGGTACGGGCCAAACAGTCAGTCATGGCCGGCTA CAACATGATGATCCCCTACATGGTGCCCGAGATGGCAGAGCCCCAGAAAGAGGCGCTGCGCCAGAACGCCAAGGCGCCGC TGGTCTACACCAAGGTGGTGATCAAGAACTGGCAATCCTTCGTCAAGCTGGGAGTGCACGAGGTCTACTCCCCCGCGGCG CCCTACAGCCGGGTCAAGCTGGACTACCCGGTCAACCTCGGCGGCTATGAGCATCCCAAGAATCCGGATCAGCCCATGTG TCTGCACATGGTCTATGTGCCGACCCTGCCGGGCAGCGGCCTCTCGGCTCGCGAACAGTCCCGCAAGGGACGCGCCATGA TCCTCGGCATGCCGTTCGAGCAGCACGAACAGATGATCCGCGAACAACTGCAGGGAATGCTGGGCAGCGCTGGTTTCAAC CATGAGCAGGACATCCTCGCCATCACGGTCAACCGCTGGTCCCACGGCTACTCCTACATCACCAATACCCTGTTTGATGA CGAGGCGCAGTGCGAAAAATGGATTGAGCTGGGTCGTCAGCCCATCGGCAACATCACCATCGCCAACTCCGACTCCGACT GGAGCCCCTACGCCCACTCCGCCATCGATCAGGCCTGGCGCGCGGTCAACGAGCTGGTCGCCATGCAAAAAGGAGGTGCC CAATGA
Upstream 100 bases:
>100_bases TCCGGATATGGCGTTAGGTTGCGCCCCTTCGTTGCCAAGCCAGTAACGAAACCGACCCTATCCCATTCCCCATTTGACTC TTCATACCACAGGGATTGCC
Downstream 100 bases:
>100_bases TCCGCACCCTGTCACTGACCGCCACCGCCCTGCTGGCAGCCATGGCGGCCCAACCCGCGCTGGCGGGCTCCGCCATGTCG GCAGGCGAGTATATTTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Tat Pathway Signal Sequence Domain Protein; Three-Component Membrane-Bound Alcohol Deshydrogenase
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSITRRDFLNGVAITIAAGIAPINLLQAAEGGKALADKTLAYPPALTGLRGNHPGSFEPAHSIARDGKQYDFANVPLEGE YDLVIVGAGISGLAAACFYQQLLGADKKILLLDNHDDFGGHAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPIALGLLKT LEVNIDELAAGFQQTFYPDLGLSRGVYFDEKHFGVNKVVSGDPGHNVADDIPRDRLNGRPLAEFIGDFPLDERDRAALLA LHEEKIDYLSGMSREEKDLWMTRNSYTSFLRDKVGLSERAITYFQQRTNDFQAVGIDATACADARLCALPGFDGLDLTPL DAEEQAELDDPYIFHFPDGNAGLTRLMVRKLIPQVAPGHTMQDVVLAKFDYGKLDLPEHKVQLRLGSTALQAKNIRRTDG STGVDVTYIKEGKLHRVRAKQSVMAGYNMMIPYMVPEMAEPQKEALRQNAKAPLVYTKVVIKNWQSFVKLGVHEVYSPAA PYSRVKLDYPVNLGGYEHPKNPDQPMCLHMVYVPTLPGSGLSAREQSRKGRAMILGMPFEQHEQMIREQLQGMLGSAGFN HEQDILAITVNRWSHGYSYITNTLFDDEAQCEKWIELGRQPIGNITIANSDSDWSPYAHSAIDQAWRAVNELVAMQKGGA Q
Sequences:
>Translated_641_residues MSITRRDFLNGVAITIAAGIAPINLLQAAEGGKALADKTLAYPPALTGLRGNHPGSFEPAHSIARDGKQYDFANVPLEGE YDLVIVGAGISGLAAACFYQQLLGADKKILLLDNHDDFGGHAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPIALGLLKT LEVNIDELAAGFQQTFYPDLGLSRGVYFDEKHFGVNKVVSGDPGHNVADDIPRDRLNGRPLAEFIGDFPLDERDRAALLA LHEEKIDYLSGMSREEKDLWMTRNSYTSFLRDKVGLSERAITYFQQRTNDFQAVGIDATACADARLCALPGFDGLDLTPL DAEEQAELDDPYIFHFPDGNAGLTRLMVRKLIPQVAPGHTMQDVVLAKFDYGKLDLPEHKVQLRLGSTALQAKNIRRTDG STGVDVTYIKEGKLHRVRAKQSVMAGYNMMIPYMVPEMAEPQKEALRQNAKAPLVYTKVVIKNWQSFVKLGVHEVYSPAA PYSRVKLDYPVNLGGYEHPKNPDQPMCLHMVYVPTLPGSGLSAREQSRKGRAMILGMPFEQHEQMIREQLQGMLGSAGFN HEQDILAITVNRWSHGYSYITNTLFDDEAQCEKWIELGRQPIGNITIANSDSDWSPYAHSAIDQAWRAVNELVAMQKGGA Q >Mature_640_residues SITRRDFLNGVAITIAAGIAPINLLQAAEGGKALADKTLAYPPALTGLRGNHPGSFEPAHSIARDGKQYDFANVPLEGEY DLVIVGAGISGLAAACFYQQLLGADKKILLLDNHDDFGGHAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPIALGLLKTL EVNIDELAAGFQQTFYPDLGLSRGVYFDEKHFGVNKVVSGDPGHNVADDIPRDRLNGRPLAEFIGDFPLDERDRAALLAL HEEKIDYLSGMSREEKDLWMTRNSYTSFLRDKVGLSERAITYFQQRTNDFQAVGIDATACADARLCALPGFDGLDLTPLD AEEQAELDDPYIFHFPDGNAGLTRLMVRKLIPQVAPGHTMQDVVLAKFDYGKLDLPEHKVQLRLGSTALQAKNIRRTDGS TGVDVTYIKEGKLHRVRAKQSVMAGYNMMIPYMVPEMAEPQKEALRQNAKAPLVYTKVVIKNWQSFVKLGVHEVYSPAAP YSRVKLDYPVNLGGYEHPKNPDQPMCLHMVYVPTLPGSGLSAREQSRKGRAMILGMPFEQHEQMIREQLQGMLGSAGFNH EQDILAITVNRWSHGYSYITNTLFDDEAQCEKWIELGRQPIGNITIANSDSDWSPYAHSAIDQAWRAVNELVAMQKGGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70807; Mature: 70676
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITRRDFLNGVAITIAAGIAPINLLQAAEGGKALADKTLAYPPALTGLRGNHPGSFEPA CCCCHHHHHCCCEEEEHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHH HSIARDGKQYDFANVPLEGEYDLVIVGAGISGLAAACFYQQLLGADKKILLLDNHDDFGG HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC HAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPIALGLLKTLEVNIDELAAGFQQTFYPDL CCCCCCCCCCCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC GLSRGVYFDEKHFGVNKVVSGDPGHNVADDIPRDRLNGRPLAEFIGDFPLDERDRAALLA CCCCCCEECCCCCCCCCEECCCCCCCCHHHCCHHHCCCCCHHHHHCCCCCCCCCCHHHHH LHEEKIDYLSGMSREEKDLWMTRNSYTSFLRDKVGLSERAITYFQQRTNDFQAVGIDATA HHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCHHH CADARLCALPGFDGLDLTPLDAEEQAELDDPYIFHFPDGNAGLTRLMVRKLIPQVAPGHT CCCCEEEECCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC MQDVVLAKFDYGKLDLPEHKVQLRLGSTALQAKNIRRTDGSTGVDVTYIKEGKLHRVRAK HHHHHEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH QSVMAGYNMMIPYMVPEMAEPQKEALRQNAKAPLVYTKVVIKNWQSFVKLGVHEVYSPAA HHHHHCCCEECHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PYSRVKLDYPVNLGGYEHPKNPDQPMCLHMVYVPTLPGSGLSAREQSRKGRAMILGMPFE CCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCHH QHEQMIREQLQGMLGSAGFNHEQDILAITVNRWSHGYSYITNTLFDDEAQCEKWIELGRQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHCCC PIGNITIANSDSDWSPYAHSAIDQAWRAVNELVAMQKGGAQ CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SITRRDFLNGVAITIAAGIAPINLLQAAEGGKALADKTLAYPPALTGLRGNHPGSFEPA CCCHHHHHCCCEEEEHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHH HSIARDGKQYDFANVPLEGEYDLVIVGAGISGLAAACFYQQLLGADKKILLLDNHDDFGG HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC HAKRNEFTTPDGLRLGYGGSESLQSPRSVYSPIALGLLKTLEVNIDELAAGFQQTFYPDL CCCCCCCCCCCCCEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC GLSRGVYFDEKHFGVNKVVSGDPGHNVADDIPRDRLNGRPLAEFIGDFPLDERDRAALLA CCCCCCEECCCCCCCCCEECCCCCCCCHHHCCHHHCCCCCHHHHHCCCCCCCCCCHHHHH LHEEKIDYLSGMSREEKDLWMTRNSYTSFLRDKVGLSERAITYFQQRTNDFQAVGIDATA HHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCHHH CADARLCALPGFDGLDLTPLDAEEQAELDDPYIFHFPDGNAGLTRLMVRKLIPQVAPGHT CCCCEEEECCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC MQDVVLAKFDYGKLDLPEHKVQLRLGSTALQAKNIRRTDGSTGVDVTYIKEGKLHRVRAK HHHHHEEECCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH QSVMAGYNMMIPYMVPEMAEPQKEALRQNAKAPLVYTKVVIKNWQSFVKLGVHEVYSPAA HHHHHCCCEECHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PYSRVKLDYPVNLGGYEHPKNPDQPMCLHMVYVPTLPGSGLSAREQSRKGRAMILGMPFE CCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCHH QHEQMIREQLQGMLGSAGFNHEQDILAITVNRWSHGYSYITNTLFDDEAQCEKWIELGRQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHCCC PIGNITIANSDSDWSPYAHSAIDQAWRAVNELVAMQKGGAQ CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA