| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299863
Identifier: 145299863
GI number: 145299863
Start: 3174947
End: 3176161
Strand: Direct
Name: 145299863
Synonym: ASA_2953
Alternate gene names: NA
Gene position: 3174947-3176161 (Clockwise)
Preceding gene: 145299862
Following gene: 145299864
Centisome position: 67.52
GC content: 58.6
Gene sequence:
>1215_bases ATGAGAAATTGGATTCGTCTCGGTATTTTTACCCTGCTTTTGCACATAGGCGTGTCACCGGCGTTTGCTCAACAGAGCGA GCCGGTTCAGGTAACGTCAGGCGTCCAATACCAGTTGATTGCACGCTGGGATCAGGATCAGCTGAACAAGATCCTGACCC GTGACACACCGGCCTTTGCCGGCATCACTGTCTCGTATACACCCGCACGCAATGCCGTGCGCCTCTATCGCATCAGCTAC CACTCCGTCATCCCCGAGATGGGCAACAAACCCACAGTGGCCTCTGGCCTGCTGGCTGTGCCTGACACCGGTGGCCAGGA CTTTCCAACCGTCTCCTATCAGCACGGCACCGTCTATGGTCACAATGAGGTGCCCTCCTTTGCCGATCAGTCACCGGAAA CCCAGTTGATGATCGCGCAGTTCGCGGGTCAGGGGTACCTGCTCATCGGTGCCGACTACTTTGGCCTCGGCACCTCGACC GAGCCGGAAGGCTATATGGTCAAGGGCAGCCATCAACAGGCCACATTTGATCTGCTGATGGCCAGCCGCGCCGTGCTCGC CCACATGCAGATCGTCAGCGACAAGCTGTTTCTGGCGGGCTGGTCACAGGGGGGATTCGTGACCATGGCCTTCCTCGAGA AACTCGAAGCAGCCGGGGTCAAGGTCGATGGCGCCGCCAGCGCACCGCTGGATGTCTACGCCTTGATGCAGGGCTTTCTG GTCTACCCGCGCAAGTTCGATGCCGTCTGGCTCAACAGCATCATGATCCTCTCATCCTTTGCCTACGAGCATTACTACGG CATACCTGGGCTCGCCCGCTCCTTGCTGACCGACGAGTATTACGACATTGCCAAGAAGGCCTATGACAGAGAGCCCTTCA ATCCGTCCGACATCACCACGGATCTGCACAAGCTGATCCGCCCGGCCTATTTCGACCCTCACTATTTTGCCAACTCGGCG TTTGGCAAGCTGATCGGCTCAGCACACGCCTACCGCTGGGTCATACAGTCACCAGTACGCAACTACTACGGGGAAACCGA TGAGGCAATCACACCGGGAGTCGGTCGCATGGCGATGACGTATGCCCAATCCATGGGATCGGGCAACCAGAACGTCGAGG CCATCTCGACCGGCCCGACCACCCATCGCGGCACCTTCGCCACCGCAGTCCCCCAGTGGAAAGCCTGGTTCGACAAGGTT GCAAAGCCAAAGTGA
Upstream 100 bases:
>100_bases CTTGTTTTCACGCTGGCACACCCAGGCCCTGCAGACGCAGAAAGCCGGGCAATGAACCGCGCCACATTGCGTATCTTTAC TGGAAAATGGAGTCTTCAGG
Downstream 100 bases:
>100_bases CCTCGGCACCTGACCCCCCGGCAAAACGCCGGGGGGTCAGGTGGCAAATACCCCCAGCCCCGGTATCTGCATGGATATCG GGTTCTTGCTCTGCATCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRNWIRLGIFTLLLHIGVSPAFAQQSEPVQVTSGVQYQLIARWDQDQLNKILTRDTPAFAGITVSYTPARNAVRLYRISY HSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGTVYGHNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTST EPEGYMVKGSHQQATFDLLMASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGAASAPLDVYALMQGFL VYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNPSDITTDLHKLIRPAYFDPHYFANSA FGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVGRMAMTYAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDKV AKPK
Sequences:
>Translated_404_residues MRNWIRLGIFTLLLHIGVSPAFAQQSEPVQVTSGVQYQLIARWDQDQLNKILTRDTPAFAGITVSYTPARNAVRLYRISY HSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGTVYGHNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTST EPEGYMVKGSHQQATFDLLMASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGAASAPLDVYALMQGFL VYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNPSDITTDLHKLIRPAYFDPHYFANSA FGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVGRMAMTYAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDKV AKPK >Mature_404_residues MRNWIRLGIFTLLLHIGVSPAFAQQSEPVQVTSGVQYQLIARWDQDQLNKILTRDTPAFAGITVSYTPARNAVRLYRISY HSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGTVYGHNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTST EPEGYMVKGSHQQATFDLLMASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGAASAPLDVYALMQGFL VYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNPSDITTDLHKLIRPAYFDPHYFANSA FGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVGRMAMTYAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDKV AKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44590; Mature: 44590
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNWIRLGIFTLLLHIGVSPAFAQQSEPVQVTSGVQYQLIARWDQDQLNKILTRDTPAFA CCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCCCCCE GITVSYTPARNAVRLYRISYHSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGTVYG EEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCHHHCEEECCCCCCCCCCEEEEECCEEEC HNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTSTEPEGYMVKGSHQQATFDLLM CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCEEEECCCCHHHHHHHH ASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGAASAPLDVYALMQGFL HHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHE VYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNPSDITT ECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DLHKLIRPAYFDPHYFANSAFGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVGRMAMT HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH YAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDKVAKPK HHHHHCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHCCCC >Mature Secondary Structure MRNWIRLGIFTLLLHIGVSPAFAQQSEPVQVTSGVQYQLIARWDQDQLNKILTRDTPAFA CCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCCCCCE GITVSYTPARNAVRLYRISYHSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGTVYG EEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCHHHCEEECCCCCCCCCCEEEEECCEEEC HNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTSTEPEGYMVKGSHQQATFDLLM CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCEEEECCCCHHHHHHHH ASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGAASAPLDVYALMQGFL HHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHE VYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNPSDITT ECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DLHKLIRPAYFDPHYFANSAFGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVGRMAMT HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH YAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDKVAKPK HHHHHCCCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA