| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is malI [H]
Identifier: 145299862
GI number: 145299862
Start: 3173558
End: 3174595
Strand: Direct
Name: malI [H]
Synonym: ASA_2952
Alternate gene names: 145299862
Gene position: 3173558-3174595 (Clockwise)
Preceding gene: 145299859
Following gene: 145299863
Centisome position: 67.49
GC content: 64.74
Gene sequence:
>1038_bases ATGTCGTCCAAACCGCTTGTATCGAAAAACGTCAAGATCACCGATGTCGCCCAGCTGGCGGGAGTCTCGGTCACTACCGT CTCCATGGTGCTCAATGGCAAGGGGCGTATCTCGCCGGCGACCGCCGAGCGGGTTCAGCAGGCCATCAAAGCGCTCGACT ACGTGCCCAACAGCGCCGCCGCCAACCTGCGCAGCCAGCAATCCAACCTGGTGGGACTGATCCTGCGCGACATCACGGAT CCCTTCTATACCGAGGTCACGGCCGGGGTGAGCGAGGTGCTGGAGCAACAGGGCTATCTGCTGTTTCTGACCCAGTGCGG CCACAGCCCGGAGCGATTGCAGCAGAGCATCCAGTCCCTGTCACGCCAGGGGGTGGCGGGCATCATCTTCAATCCGGTGC GCGGCGCGGCGGCTAAAACCCTGGAGACCCTGCTGGGCTCACAGCTGCCGGTGGTGTGCGCCGCCCGCTCCTACTACCGG GATGACGTGGACTTTATCGGTCCCGACAACACCCATGCCGCCCAGCAGGCCACCACCTATCTCATCGAGCAGGGCCACCG CCATATCGCCTACGTGGGCGGGCGGGCCGACTCCCTCACCCGCGCCGAGCGCATCGGCGGCTACTGCGCCAGCCTGCTGC AATACGGCCTCCCCTTCAAACCCGAGTGGGTACTGGAGTGCGAGCGCACCCAGCGCAGCGCAGCCGACACTATCGCCCAA CTGCTGCACCAGCACCCCAAGGTGACGGCCATTCTCTGCCACTACCCAGAGGTGGCGCTCGGCGGCATTTACGGGGTGGA GGCGAGCGGACGCACAGTGGGCAAGGACAACTACATAGGCCAGCAAGTAGCCCTGCTCGGCTTTGACGACGTGGCAGAGG CGGAACTCACTTATCCCGCCCTCACCTTCGTCAGCTCACCGGCACGGGAAATAGGCCGCCAGGCCGCCTTGCGGCTGCTG ACCCGGATGCAGCAACCGGAGCTTGCCCCCAATCGTCATATCATCGCCCCCCATCTGCAGAAGCGGGCATCAGCCTGA
Upstream 100 bases:
>100_bases TCACTTGGGTATACGAGGGGGTATGCTGTGGTTCTCCGGTCTCTTTGCCCATGGCTGCAGCACTCGCACTATGTCGTCAC AACCCATGCCGTCCAAACCT
Downstream 100 bases:
>100_bases CCAGGCAGGTCGCGCCATGCGGCCTCGCCTTGTCATGTCCCCCACCCCCCCAGATGCCGGGTGCCATCAACAAACAGGCC ATTGGATGATCGGGAACCGA
Product: DNA-binding transcriptional repressor MalI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSSKPLVSKNVKITDVAQLAGVSVTTVSMVLNGKGRISPATAERVQQAIKALDYVPNSAAANLRSQQSNLVGLILRDITD PFYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSLSRQGVAGIIFNPVRGAAAKTLETLLGSQLPVVCAARSYYR DDVDFIGPDNTHAAQQATTYLIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQ LLHQHPKVTAILCHYPEVALGGIYGVEASGRTVGKDNYIGQQVALLGFDDVAEAELTYPALTFVSSPAREIGRQAALRLL TRMQQPELAPNRHIIAPHLQKRASA
Sequences:
>Translated_345_residues MSSKPLVSKNVKITDVAQLAGVSVTTVSMVLNGKGRISPATAERVQQAIKALDYVPNSAAANLRSQQSNLVGLILRDITD PFYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSLSRQGVAGIIFNPVRGAAAKTLETLLGSQLPVVCAARSYYR DDVDFIGPDNTHAAQQATTYLIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQ LLHQHPKVTAILCHYPEVALGGIYGVEASGRTVGKDNYIGQQVALLGFDDVAEAELTYPALTFVSSPAREIGRQAALRLL TRMQQPELAPNRHIIAPHLQKRASA >Mature_344_residues SSKPLVSKNVKITDVAQLAGVSVTTVSMVLNGKGRISPATAERVQQAIKALDYVPNSAAANLRSQQSNLVGLILRDITDP FYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSLSRQGVAGIIFNPVRGAAAKTLETLLGSQLPVVCAARSYYRD DVDFIGPDNTHAAQQATTYLIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQL LHQHPKVTAILCHYPEVALGGIYGVEASGRTVGKDNYIGQQVALLGFDDVAEAELTYPALTFVSSPAREIGRQAALRLLT RMQQPELAPNRHIIAPHLQKRASA
Specific function: Repressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787906, Length=333, Percent_Identity=44.7447447447448, Blast_Score=294, Evalue=4e-81, Organism=Escherichia coli, GI1790369, Length=313, Percent_Identity=28.7539936102236, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1790194, Length=342, Percent_Identity=28.6549707602339, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789068, Length=320, Percent_Identity=28.4375, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI48994940, Length=320, Percent_Identity=29.375, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1789202, Length=332, Percent_Identity=28.6144578313253, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787948, Length=338, Percent_Identity=26.9230769230769, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1787580, Length=341, Percent_Identity=29.3255131964809, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1788474, Length=307, Percent_Identity=27.3615635179153, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790715, Length=323, Percent_Identity=23.8390092879257, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1786540, Length=344, Percent_Identity=25.8720930232558, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786268, Length=167, Percent_Identity=28.7425149700599, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790689, Length=325, Percent_Identity=24.9230769230769, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37384; Mature: 37253
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKPLVSKNVKITDVAQLAGVSVTTVSMVLNGKGRISPATAERVQQAIKALDYVPNSAA CCCCCCCCCCCCHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH ANLRSQQSNLVGLILRDITDPFYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH SRQGVAGIIFNPVRGAAAKTLETLLGSQLPVVCAARSYYRDDVDFIGPDNTHAAQQATTY HHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQ HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHH LLHQHPKVTAILCHYPEVALGGIYGVEASGRTVGKDNYIGQQVALLGFDDVAEAELTYPA HHHCCCCEEEEEEECCCHHHCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH LTFVSSPAREIGRQAALRLLTRMQQPELAPNRHIIAPHLQKRASA HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHCCC >Mature Secondary Structure SSKPLVSKNVKITDVAQLAGVSVTTVSMVLNGKGRISPATAERVQQAIKALDYVPNSAA CCCCCCCCCCCHHHHHHHHCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHH ANLRSQQSNLVGLILRDITDPFYTEVTAGVSEVLEQQGYLLFLTQCGHSPERLQQSIQSL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH SRQGVAGIIFNPVRGAAAKTLETLLGSQLPVVCAARSYYRDDVDFIGPDNTHAAQQATTY HHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LIEQGHRHIAYVGGRADSLTRAERIGGYCASLLQYGLPFKPEWVLECERTQRSAADTIAQ HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHH LLHQHPKVTAILCHYPEVALGGIYGVEASGRTVGKDNYIGQQVALLGFDDVAEAELTYPA HHHCCCCEEEEEEECCCHHHCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH LTFVSSPAREIGRQAALRLLTRMQQPELAPNRHIIAPHLQKRASA HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670898; 1856179; 9097039; 9278503 [H]