| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yiaY [H]
Identifier: 145299820
GI number: 145299820
Start: 3126909
End: 3128060
Strand: Direct
Name: yiaY [H]
Synonym: ASA_2902
Alternate gene names: 145299820
Gene position: 3126909-3128060 (Clockwise)
Preceding gene: 145299818
Following gene: 145299831
Centisome position: 66.5
GC content: 61.81
Gene sequence:
>1152_bases ATGGCGACATTCAAGTTCTATATTCCCGCAATCAACCTGATGGGAGCGGGCTGTCTGCAAGAGGCAGCGGCCGATATCAA GGGTTATGGCTATCGCAAGGCGCTCATCGTCACCGACAAGATCCTCAACCAGATAGGCGTGGTCGCCAAGCTCACCACCC TGCTGGCAGAACATGGCATTGAAAGCGTGGTTTTCGATGAAACCAAGCCGAACCCCACCATGACCAACGTCGAGTCGGGT CTGGCCATGATCAGGGCCAACGGCTGCGACTGCGTCATCTCGCTGGGGGGCGGCTCACCCCATGACTGCGCCAAGGGCAT CGCCCTGGTGGCCGCCAACGGTGGCAGCATCCAGGACTACGAAGGGGTGGATCGCTCCGCCAAACCGCAACTGCCGCTCA TCGCCATCAACACCACAGCCGGCACTGCCTCCGAAATGACCCGTTTTTGCATCATCACGGACGAGGCGCGCCAGGTGAAG ATGGCCATCATCGACAAGCACGTCACCCCGCTGATGTCGGTCAACGATCCCGAGCTGATGCTGGCCAAACCGGCCGGCCT CACCGCCGCCACCGGCATGGATGCGCTGACCCACGCCATCGAGGCCTATGTCTCCACCATCGCCACCCCTGTGACCGATG CCAGCGCCATCATGGCGATCCAGCTCATCGCCAAACACCTGCGCACCGCGGTCAATCAGGGTGATGACCTGCACGCCCGC GAGCAGATGGCCTATGCCCAGTTCCTGGCCGGCATGGCCTTCAACAACGCAAGCCTGGGTTATGTGCACGCCATGGCGCA CCAGCTGGGGGGCTTTTATGACCTGCCCCACGGTGTCTGCAACGCCGTGCTGCTGCCCCACGTTCAGGCATACAACGCCC AGGTGAATGCCGCTCGCCTTAAAGATGTGGCCCGCTACATGGGCGTTGACGTGAGCACCATGAACGACGAACAGGGCGCC GCTGCCGCCATTGCCGCCATCAAGCAGCTGGCGCTGGACGTGAAGATCCCGGCCGGTCTGGAGCAACTTGGCGTCAAGGC CGATGATTTCGACGTGCTGGCCAGCAACGCCCTGAAAGATGCCTGCGGCTTCACCAACCCGAAACAGGCGAGCCACGAAG AGATAGTCGCCATCTTCCGCGCCGCCATGTAA
Upstream 100 bases:
>100_bases AAAGTTGCAAACAGGATACCATTGACCCCTTTTCATCCCCACTGACGATGCTATTTTGACGTCCGCATACCACTTAATGG CTAATCATACGGAGTCCATC
Downstream 100 bases:
>100_bases ACCGCATTGCCAATGGATAGGAAAAGGGGCCTGATCTGGCCCCTTTTTTCGCACTATTTCGTCAGCACCACATCGTTGAT GGCGCTGGCCAATCGGGTCA
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQIGVVAKLTTLLAEHGIESVVFDETKPNPTMTNVESG LAMIRANGCDCVISLGGGSPHDCAKGIALVAANGGSIQDYEGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARQVK MAIIDKHVTPLMSVNDPELMLAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAIMAIQLIAKHLRTAVNQGDDLHAR EQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNAQVNAARLKDVARYMGVDVSTMNDEQGA AAAIAAIKQLALDVKIPAGLEQLGVKADDFDVLASNALKDACGFTNPKQASHEEIVAIFRAAM
Sequences:
>Translated_383_residues MATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQIGVVAKLTTLLAEHGIESVVFDETKPNPTMTNVESG LAMIRANGCDCVISLGGGSPHDCAKGIALVAANGGSIQDYEGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARQVK MAIIDKHVTPLMSVNDPELMLAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAIMAIQLIAKHLRTAVNQGDDLHAR EQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNAQVNAARLKDVARYMGVDVSTMNDEQGA AAAIAAIKQLALDVKIPAGLEQLGVKADDFDVLASNALKDACGFTNPKQASHEEIVAIFRAAM >Mature_382_residues ATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQIGVVAKLTTLLAEHGIESVVFDETKPNPTMTNVESGL AMIRANGCDCVISLGGGSPHDCAKGIALVAANGGSIQDYEGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARQVKM AIIDKHVTPLMSVNDPELMLAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAIMAIQLIAKHLRTAVNQGDDLHARE QMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNAQVNAARLKDVARYMGVDVSTMNDEQGAA AAIAAIKQLALDVKIPAGLEQLGVKADDFDVLASNALKDACGFTNPKQASHEEIVAIFRAAM
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=409, Percent_Identity=27.8728606356968, Blast_Score=143, Evalue=3e-34, Organism=Escherichia coli, GI48994951, Length=383, Percent_Identity=68.1462140992167, Blast_Score=540, Evalue=1e-155, Organism=Escherichia coli, GI1789163, Length=373, Percent_Identity=44.2359249329759, Blast_Score=309, Evalue=2e-85, Organism=Escherichia coli, GI87082107, Length=377, Percent_Identity=38.7267904509284, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1787493, Length=387, Percent_Identity=32.2997416020672, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1789386, Length=354, Percent_Identity=23.1638418079096, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17537053, Length=412, Percent_Identity=24.5145631067961, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6321181, Length=379, Percent_Identity=53.2981530343008, Blast_Score=402, Evalue=1e-113, Organism=Drosophila melanogaster, GI24657991, Length=410, Percent_Identity=27.0731707317073, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 40367; Mature: 40236
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQIGVVAKLTTLLAEHGI CCEEEEECCHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC ESVVFDETKPNPTMTNVESGLAMIRANGCDCVISLGGGSPHDCAKGIALVAANGGSIQDY CCEEECCCCCCCCHHHHHCCEEEEEECCCEEEEECCCCCHHHHHCCEEEEEECCCCCCCC EGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARQVKMAIIDKHVTPLMSVNDPELM CCCCCCCCCCCCEEEEECCCCCHHHCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEE LAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAIMAIQLIAKHLRTAVNQGDDLHAR EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH EQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNAQVNAARL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHH KDVARYMGVDVSTMNDEQGAAAAIAAIKQLALDVKIPAGLEQLGVKADDFDVLASNALKD HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHCCCCCCHHHHHHHHHHH ACGFTNPKQASHEEIVAIFRAAM HHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure ATFKFYIPAINLMGAGCLQEAAADIKGYGYRKALIVTDKILNQIGVVAKLTTLLAEHGI CEEEEECCHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC ESVVFDETKPNPTMTNVESGLAMIRANGCDCVISLGGGSPHDCAKGIALVAANGGSIQDY CCEEECCCCCCCCHHHHHCCEEEEEECCCEEEEECCCCCHHHHHCCEEEEEECCCCCCCC EGVDRSAKPQLPLIAINTTAGTASEMTRFCIITDEARQVKMAIIDKHVTPLMSVNDPELM CCCCCCCCCCCCEEEEECCCCCHHHCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEE LAKPAGLTAATGMDALTHAIEAYVSTIATPVTDASAIMAIQLIAKHLRTAVNQGDDLHAR EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH EQMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQAYNAQVNAARL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHH KDVARYMGVDVSTMNDEQGAAAAIAAIKQLALDVKIPAGLEQLGVKADDFDVLASNALKD HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHEEECCCCHHHHCCCCCCHHHHHHHHHHH ACGFTNPKQASHEEIVAIFRAAM HHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 7768815 [H]