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The map label for this gene is 145296038

Identifier: 145296038

GI number: 145296038

Start: 2155584

End: 2156120

Strand: Reverse

Name: 145296038

Synonym: cgR_1960

Alternate gene names: NA

Gene position: 2156120-2155584 (Counterclockwise)

Preceding gene: 145296039

Following gene: 145296037

Centisome position: 65.06

GC content: 53.63

Gene sequence:

>537_bases
ATGAAATCTCCATTTATTTTTGATGTCGCCGCACTCCTTCGTGGAAGTGCCCTTCCGGAACACCTCACCCAATCAGGTCC
AAGCCCGACCCGCATTGGTCCGGAAATGATCGCGATCCCCGAGGGCGGAAAAGTTATCGTAGAAGCCCAGATCATTCCAC
TCGGTGGAGGCCTGGCCGTCGAAGCAGATATCGAAGCGCAGCTTCTGGGACAGTGCTCCCGCTGCCTCCGCGAACTCACC
CCAACCAAGACGCTGCACGTCTCTGAGGTTTTTGCTGCCGATCCAGACTTTGTTACTGGTGAAGATGCAGCAGATGACGA
AGATGAGCTGCCAATGGTTAACCAAGACCAGATTGATCTGCTTCAGTCTGTCATTGATGAAGCTGGTCTGACCTTGCCGT
TTAACCCTGTCTGCGAAGAACTTGGGTACGGCGCATGCCAGGATGATGAAACGCCAGCTCCTGATGGTGTCTCTGAAGAA
GTAGAAGACGAGGAAAAGGTCGATCCTCGCTGGGCTGGTTTGGAGAAGTTCCTGTGA

Upstream 100 bases:

>100_bases
TAGTTTCCAAGAAACCATTTAGGCTTTTTCACCTTTCCGTCTAGCGATCCTCATCTGATGTATGTAGTCACGATGAGGTA
CGAGTAGGATCTTCCTGGTC

Downstream 100 bases:

>100_bases
GCAGGAAAAAGAATCGCCTCACCGGGGTAGATGCACTCAATGAAGCATTCGATGCAGTAGATCATCAGCCGCTGCTTGAC
CACCTTGGTGTGGACATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKSPFIFDVAALLRGSALPEHLTQSGPSPTRIGPEMIAIPEGGKVIVEAQIIPLGGGLAVEADIEAQLLGQCSRCLRELT
PTKTLHVSEVFAADPDFVTGEDAADDEDELPMVNQDQIDLLQSVIDEAGLTLPFNPVCEELGYGACQDDETPAPDGVSEE
VEDEEKVDPRWAGLEKFL

Sequences:

>Translated_178_residues
MKSPFIFDVAALLRGSALPEHLTQSGPSPTRIGPEMIAIPEGGKVIVEAQIIPLGGGLAVEADIEAQLLGQCSRCLRELT
PTKTLHVSEVFAADPDFVTGEDAADDEDELPMVNQDQIDLLQSVIDEAGLTLPFNPVCEELGYGACQDDETPAPDGVSEE
VEDEEKVDPRWAGLEKFL
>Mature_178_residues
MKSPFIFDVAALLRGSALPEHLTQSGPSPTRIGPEMIAIPEGGKVIVEAQIIPLGGGLAVEADIEAQLLGQCSRCLRELT
PTKTLHVSEVFAADPDFVTGEDAADDEDELPMVNQDQIDLLQSVIDEAGLTLPFNPVCEELGYGACQDDETPAPDGVSEE
VEDEEKVDPRWAGLEKFL

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1660 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19085; Mature: 19085

Theoretical pI: Translated: 3.71; Mature: 3.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPFIFDVAALLRGSALPEHLTQSGPSPTRIGPEMIAIPEGGKVIVEAQIIPLGGGLAV
CCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEE
EADIEAQLLGQCSRCLRELTPTKTLHVSEVFAADPDFVTGEDAADDEDELPMVNQDQIDL
ECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LQSVIDEAGLTLPFNPVCEELGYGACQDDETPAPDGVSEEVEDEEKVDPRWAGLEKFL
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKSPFIFDVAALLRGSALPEHLTQSGPSPTRIGPEMIAIPEGGKVIVEAQIIPLGGGLAV
CCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEE
EADIEAQLLGQCSRCLRELTPTKTLHVSEVFAADPDFVTGEDAADDEDELPMVNQDQIDL
ECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LQSVIDEAGLTLPFNPVCEELGYGACQDDETPAPDGVSEEVEDEEKVDPRWAGLEKFL
HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]