Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296020
Identifier: 145296020
GI number: 145296020
Start: 2129932
End: 2130801
Strand: Reverse
Name: 145296020
Synonym: cgR_1943
Alternate gene names: NA
Gene position: 2130801-2129932 (Counterclockwise)
Preceding gene: 145296021
Following gene: 145296018
Centisome position: 64.29
GC content: 50.11
Gene sequence:
>870_bases ATGATTACAGTTCTGACACGCAGACACTTGCGCTGCTTTTTCCGCGACCGCATGGCAGTGCTGTTTTCCATCATGGGTGC GCTCATCCTTTTGGGCCTGTACGTGCTGTTTTTAGGAAAACTGCAAATTGACGGTCTCATGGTGGATCTACCTGACTCAG CCCGAGACGATGTTGAAGGATTCGTCTTCAATTGGGTGTTTTCCGGAATTCTCATCACGTCCGCAATCACTGTTCCGCAA GCAGCACTTGGAGTGCTGGTTGAAGATCGCACCCGCGGAGGCATCAAAGATTTCCTCGTGGCACCCGTATCCAGAACGAC GCTGACGGTGTCCTATATCTTCGCAGCAGTCATTGTCGCCATGACGATTTTGATCTTTGAAATCGTGGTGGGAAGTATTG GTTTAGCTATTTTGGGGCACTTCAGCATGAGCATTGCTCGCGTGCTCGAATTGGTAGTCGCCTTGCTTCTGCTCACCCTG GTGTTTTCCGCAATTGCAGCATTTCTGATCACCTTGGTGAAATCTCAAGGCGGAATGTCTGCGCTTTCAAGCCTGGTAGG CACCCTGGCGGGCTTTTTATCTGCTGCTTATATTCCACCCATCGCATTGCCTGAAGCAGTGACAAACGTGTTGAACTTCC TCCCGTTTACCCCAGCTGGAATGTTGATCAGACAAATTGTGGTTGCCCCAGTATTGGACGCGATTTCACTTCCACCCGAA GCCTTCGATATCTTCCAATTCGGATACGGACTCAAACTGGAAATGTTTGGGGAACCCGTTTCTACATGGGTGGCAGTAGG AATTGTTGCCTCATGGGGAGTGGTGTTTGGACTCATTGCCGCGTCCAAAATGAAAAGCGTGGTGCGATAA
Upstream 100 bases:
>100_bases CGCGCCTAGCAACAGAACTAGATGGGGTTCTCGACGTAGAGATCCGCCACGGTTCCATGGACGATGTATTTCTAGCAGTT ACAGCTGAACGGAAACGATC
Downstream 100 bases:
>100_bases ATCTTGCTAAAGAATGCTTCTACAGCATGTCTTCAGGGCTGACTCCATTGCAATCGCGCAGATTCACATTCGCACGTGCG CGAAGCAGCACATCCACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-2 Type Transporter Superfamily; ABC-2 Type Transporter; ABC Transporter-Like Protein CylB; ABC Transporter Permease; ABC Transporter; ABC Transporter Integral Membrane Protein; Integral Membrane Protein; CylB Protein; ABC Transporter Permease Component
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MITVLTRRHLRCFFRDRMAVLFSIMGALILLGLYVLFLGKLQIDGLMVDLPDSARDDVEGFVFNWVFSGILITSAITVPQ AALGVLVEDRTRGGIKDFLVAPVSRTTLTVSYIFAAVIVAMTILIFEIVVGSIGLAILGHFSMSIARVLELVVALLLLTL VFSAIAAFLITLVKSQGGMSALSSLVGTLAGFLSAAYIPPIALPEAVTNVLNFLPFTPAGMLIRQIVVAPVLDAISLPPE AFDIFQFGYGLKLEMFGEPVSTWVAVGIVASWGVVFGLIAASKMKSVVR
Sequences:
>Translated_289_residues MITVLTRRHLRCFFRDRMAVLFSIMGALILLGLYVLFLGKLQIDGLMVDLPDSARDDVEGFVFNWVFSGILITSAITVPQ AALGVLVEDRTRGGIKDFLVAPVSRTTLTVSYIFAAVIVAMTILIFEIVVGSIGLAILGHFSMSIARVLELVVALLLLTL VFSAIAAFLITLVKSQGGMSALSSLVGTLAGFLSAAYIPPIALPEAVTNVLNFLPFTPAGMLIRQIVVAPVLDAISLPPE AFDIFQFGYGLKLEMFGEPVSTWVAVGIVASWGVVFGLIAASKMKSVVR >Mature_289_residues MITVLTRRHLRCFFRDRMAVLFSIMGALILLGLYVLFLGKLQIDGLMVDLPDSARDDVEGFVFNWVFSGILITSAITVPQ AALGVLVEDRTRGGIKDFLVAPVSRTTLTVSYIFAAVIVAMTILIFEIVVGSIGLAILGHFSMSIARVLELVVALLLLTL VFSAIAAFLITLVKSQGGMSALSSLVGTLAGFLSAAYIPPIALPEAVTNVLNFLPFTPAGMLIRQIVVAPVLDAISLPPE AFDIFQFGYGLKLEMFGEPVSTWVAVGIVASWGVVFGLIAASKMKSVVR
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30952; Mature: 30952
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVLTRRHLRCFFRDRMAVLFSIMGALILLGLYVLFLGKLQIDGLMVDLPDSARDDVEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH FVFNWVFSGILITSAITVPQAALGVLVEDRTRGGIKDFLVAPVSRTTLTVSYIFAAVIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH MTILIFEIVVGSIGLAILGHFSMSIARVLELVVALLLLTLVFSAIAAFLITLVKSQGGMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALSSLVGTLAGFLSAAYIPPIALPEAVTNVLNFLPFTPAGMLIRQIVVAPVLDAISLPPE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH AFDIFQFGYGLKLEMFGEPVSTWVAVGIVASWGVVFGLIAASKMKSVVR HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITVLTRRHLRCFFRDRMAVLFSIMGALILLGLYVLFLGKLQIDGLMVDLPDSARDDVEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH FVFNWVFSGILITSAITVPQAALGVLVEDRTRGGIKDFLVAPVSRTTLTVSYIFAAVIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH MTILIFEIVVGSIGLAILGHFSMSIARVLELVVALLLLTLVFSAIAAFLITLVKSQGGMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ALSSLVGTLAGFLSAAYIPPIALPEAVTNVLNFLPFTPAGMLIRQIVVAPVLDAISLPPE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH AFDIFQFGYGLKLEMFGEPVSTWVAVGIVASWGVVFGLIAASKMKSVVR HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA