Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145295971
Identifier: 145295971
GI number: 145295971
Start: 2094297
End: 2095946
Strand: Reverse
Name: 145295971
Synonym: cgR_1895
Alternate gene names: NA
Gene position: 2095946-2094297 (Counterclockwise)
Preceding gene: 145295972
Following gene: 145295970
Centisome position: 63.24
GC content: 50.48
Gene sequence:
>1650_bases ATGGGCGTGTCCCTTGCGGAGTTTTTGGGGGTGAAGATCCCGCCGCGTTATATCACTCCTCCTTTGCGGGATTTAACGCA GCCTGATGCGTCGTGGGGGCATGACTGTATTAAGTGGGCGCGTGAGGTTAGGAAAATTGAGCTTGATGATTGGCAGCAGC TTGCTGTTATTTCGATGCTTGAGGTTTTAACTTTTGATGAGGCTATGAGGCGTGCAGCTGAGGAGGATCGTGCTCAGCAG TCAGGGACTCGCACGCAGCAGGCTTATGCTGCGTTGTATCAGCCACGTAGGTATGGGTTGCCGAATGGGAAGCTTCGGTT TTCTCTTTCTCTTACTTTGTTGTCTCGCCAGCAGGGTAAGACGTTGCTTTCTAAGATTGTTATTGAGTGGTTTCTTTTCC GTATGCGTGTTTCTGAGATGATGATCTCGGCGCAGGACTATAACCATGCAAATAAGCTTTTTGAAGAGATCCGCGATGAA GTGGATTTGATTCCTGCGTTGCGGAAGAAGCAAGCGAAGATCTCGAACAATAACGGCAATAAATACATCAAGTCCACCGC TGGTGGGCATATGCGTCCGATTGGCGTCATTAAGGGCGCTGGCCGTGGTGCGACTAATGAGTTCTTGTATTTGGATGAGT TGCGTGAGCAGTCTTCGTGGGGTGGGTGGAACTCGCTGTCGTCTACGACGATTGCTGTGTTGAATGGTTTCATTTTGGCG ACGTCGAATGCTGGTGATGCTGATGCTGTGGTTTTGAATGAGATTCAGGACAAAGCTCAGGAAGCCATTGATCAGGGGCG TACGGAGCATACTTCTACGTTTTTGATTGAGTGGTCTGCTGATCCTGTTTTGGATTATCGGGATGAGCGTGCTTGGCGTC AGGGGAATCCGTCGTTGGGTACTGGGCGTTTGACGATGGATTCTTTGCGTGGCGAGATGGAAACGAAGTCGGAGTCTGCA TTCCGGACGGAAAATTTGTGCCAGCGTGTGGACAAATTGGTGGATGCGATTACGCCGGTGATCCCAATTTCTGAGTGGGA TGTTTTTGGGCGTGCGCAGAAGCCTAAGTTTGATTCCTCTTCGGTGTGTGTTGAGGTGTCGCCGGTTGACGGCCAGACAC GTGTCGTTGTGAACGTGCGAACAAAGGGCAATGGTCACTTTTTATCGGTGGCGCCGTTTGAGTCGGATATGAGCATCGAT GAGACTGTCACTGCTGTGAAGTCGTTGGTTGATCAGATTGATCCTGATGTTGTTGTGGTTGATAAGAAGTCTGCTGCTCA TGTATTGATTGAGCCGTTGTCTCGTGTGGGGGTGGAAACTCAGTCGCCGGATTATGCGTCGATGTTGCAGACGTGGACGG ACTTTGAGCGGTATTTCGCTGAGGGGAAGATATTTCATGAGCAGTCCCAGGTGTGGGCTGATGAGCTTTCTACTTCTAAG TTGCGCATGGACACCAAGGGTCAGGTTATTGGTTTTGATCGGTATTTCAATCATCCTCAGGCGTTGCAGGCTGCGGTGCT TGCGGTGTGGGGTTTGACGAAGTTTGAGGTAAAGATCCCGACGTTTAAGAAAGTTGAGCCGGAGGAACGCAAGCAAATGA TTCTGCCTCGTGCGGTTAAGCTAGATAGGAGGCCGGTATGGGCGAGCTAG
Upstream 100 bases:
>100_bases ATCAGGTGTTGCAGCGTTATTTGACTGACTTGGGGTTGACTCCTCAGGGTCGTAAGAACTTGGGTTTGGATTCTGGGGAT GATGAACAAGACGGGTGGTG
Downstream 100 bases:
>100_bases GCCATAAGGTTTTACCTCGGTGGAGTACTAAGCCTAGGGATCGTTCTGGGGATTCAGCGTCGTGGGCTGAGTGGCAGAGA CGTTTCGCGGAGATGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MGVSLAEFLGVKIPPRYITPPLRDLTQPDASWGHDCIKWAREVRKIELDDWQQLAVISMLEVLTFDEAMRRAAEEDRAQQ SGTRTQQAYAALYQPRRYGLPNGKLRFSLSLTLLSRQQGKTLLSKIVIEWFLFRMRVSEMMISAQDYNHANKLFEEIRDE VDLIPALRKKQAKISNNNGNKYIKSTAGGHMRPIGVIKGAGRGATNEFLYLDELREQSSWGGWNSLSSTTIAVLNGFILA TSNAGDADAVVLNEIQDKAQEAIDQGRTEHTSTFLIEWSADPVLDYRDERAWRQGNPSLGTGRLTMDSLRGEMETKSESA FRTENLCQRVDKLVDAITPVIPISEWDVFGRAQKPKFDSSSVCVEVSPVDGQTRVVVNVRTKGNGHFLSVAPFESDMSID ETVTAVKSLVDQIDPDVVVVDKKSAAHVLIEPLSRVGVETQSPDYASMLQTWTDFERYFAEGKIFHEQSQVWADELSTSK LRMDTKGQVIGFDRYFNHPQALQAAVLAVWGLTKFEVKIPTFKKVEPEERKQMILPRAVKLDRRPVWAS
Sequences:
>Translated_549_residues MGVSLAEFLGVKIPPRYITPPLRDLTQPDASWGHDCIKWAREVRKIELDDWQQLAVISMLEVLTFDEAMRRAAEEDRAQQ SGTRTQQAYAALYQPRRYGLPNGKLRFSLSLTLLSRQQGKTLLSKIVIEWFLFRMRVSEMMISAQDYNHANKLFEEIRDE VDLIPALRKKQAKISNNNGNKYIKSTAGGHMRPIGVIKGAGRGATNEFLYLDELREQSSWGGWNSLSSTTIAVLNGFILA TSNAGDADAVVLNEIQDKAQEAIDQGRTEHTSTFLIEWSADPVLDYRDERAWRQGNPSLGTGRLTMDSLRGEMETKSESA FRTENLCQRVDKLVDAITPVIPISEWDVFGRAQKPKFDSSSVCVEVSPVDGQTRVVVNVRTKGNGHFLSVAPFESDMSID ETVTAVKSLVDQIDPDVVVVDKKSAAHVLIEPLSRVGVETQSPDYASMLQTWTDFERYFAEGKIFHEQSQVWADELSTSK LRMDTKGQVIGFDRYFNHPQALQAAVLAVWGLTKFEVKIPTFKKVEPEERKQMILPRAVKLDRRPVWAS >Mature_548_residues GVSLAEFLGVKIPPRYITPPLRDLTQPDASWGHDCIKWAREVRKIELDDWQQLAVISMLEVLTFDEAMRRAAEEDRAQQS GTRTQQAYAALYQPRRYGLPNGKLRFSLSLTLLSRQQGKTLLSKIVIEWFLFRMRVSEMMISAQDYNHANKLFEEIRDEV DLIPALRKKQAKISNNNGNKYIKSTAGGHMRPIGVIKGAGRGATNEFLYLDELREQSSWGGWNSLSSTTIAVLNGFILAT SNAGDADAVVLNEIQDKAQEAIDQGRTEHTSTFLIEWSADPVLDYRDERAWRQGNPSLGTGRLTMDSLRGEMETKSESAF RTENLCQRVDKLVDAITPVIPISEWDVFGRAQKPKFDSSSVCVEVSPVDGQTRVVVNVRTKGNGHFLSVAPFESDMSIDE TVTAVKSLVDQIDPDVVVVDKKSAAHVLIEPLSRVGVETQSPDYASMLQTWTDFERYFAEGKIFHEQSQVWADELSTSKL RMDTKGQVIGFDRYFNHPQALQAAVLAVWGLTKFEVKIPTFKKVEPEERKQMILPRAVKLDRRPVWAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61930; Mature: 61799
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSLAEFLGVKIPPRYITPPLRDLTQPDASWGHDCIKWAREVRKIELDDWQQLAVISML CCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH EVLTFDEAMRRAAEEDRAQQSGTRTQQAYAALYQPRRYGLPNGKLRFSLSLTLLSRQQGK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCEEEEEEEEEHHHHHHH TLLSKIVIEWFLFRMRVSEMMISAQDYNHANKLFEEIRDEVDLIPALRKKQAKISNNNGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KYIKSTAGGHMRPIGVIKGAGRGATNEFLYLDELREQSSWGGWNSLSSTTIAVLNGFILA EEEEECCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHCCEEEE TSNAGDADAVVLNEIQDKAQEAIDQGRTEHTSTFLIEWSADPVLDYRDERAWRQGNPSLG ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCC TGRLTMDSLRGEMETKSESAFRTENLCQRVDKLVDAITPVIPISEWDVFGRAQKPKFDSS CCCEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SVCVEVSPVDGQTRVVVNVRTKGNGHFLSVAPFESDMSIDETVTAVKSLVDQIDPDVVVV CEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE DKKSAAHVLIEPLSRVGVETQSPDYASMLQTWTDFERYFAEGKIFHEQSQVWADELSTSK ECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHH LRMDTKGQVIGFDRYFNHPQALQAAVLAVWGLTKFEVKIPTFKKVEPEERKQMILPRAVK EEECCCCCEEEEHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCHHHH LDRRPVWAS CCCCCCCCC >Mature Secondary Structure GVSLAEFLGVKIPPRYITPPLRDLTQPDASWGHDCIKWAREVRKIELDDWQQLAVISML CCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH EVLTFDEAMRRAAEEDRAQQSGTRTQQAYAALYQPRRYGLPNGKLRFSLSLTLLSRQQGK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCEEEEEEEEEHHHHHHH TLLSKIVIEWFLFRMRVSEMMISAQDYNHANKLFEEIRDEVDLIPALRKKQAKISNNNGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KYIKSTAGGHMRPIGVIKGAGRGATNEFLYLDELREQSSWGGWNSLSSTTIAVLNGFILA EEEEECCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHCCEEEE TSNAGDADAVVLNEIQDKAQEAIDQGRTEHTSTFLIEWSADPVLDYRDERAWRQGNPSLG ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCC TGRLTMDSLRGEMETKSESAFRTENLCQRVDKLVDAITPVIPISEWDVFGRAQKPKFDSS CCCEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SVCVEVSPVDGQTRVVVNVRTKGNGHFLSVAPFESDMSIDETVTAVKSLVDQIDPDVVVV CEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE DKKSAAHVLIEPLSRVGVETQSPDYASMLQTWTDFERYFAEGKIFHEQSQVWADELSTSK ECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHH LRMDTKGQVIGFDRYFNHPQALQAAVLAVWGLTKFEVKIPTFKKVEPEERKQMILPRAVK EEECCCCCEEEEHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCHHHH LDRRPVWAS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA