Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145295969
Identifier: 145295969
GI number: 145295969
Start: 2091623
End: 2093002
Strand: Reverse
Name: 145295969
Synonym: cgR_1893
Alternate gene names: NA
Gene position: 2093002-2091623 (Counterclockwise)
Preceding gene: 145295970
Following gene: 145295968
Centisome position: 63.15
GC content: 54.42
Gene sequence:
>1380_bases ATGGAAACGATAGATATTTACGAAGACATCACACCTGGCCTTGAGGTTCGTGTCCGTGATTCCTTGCCGGACGAGGGCCC TGTCACCGTGCGAATTAATTCGTTTGGGGGAGCAGTTGATGTGGGGCACACTATCCGCCACCTGCTGGCAGACCACCCAG GGCACGTGACGTGCGTGGTTGATGGGGTGGCCGCGTCTGCAGCTTCAATCATTGCAATCGCTGGCTCTGATGAGCTGGTG ATGCGTGAGGGGTCTGAACTGATGATCCATCAGGCCAGCCTGGGGATGGATGGAAATTCATCTTCGCTGCGGTCGATGGC TGAGCGTTTGGAAAAGATGGACGCTGAGTTGGCGAATGTTTATGCATCCAAAGCTGGTGGGGATGCGGAACATTGGCTTG GGCTGATGGCTGCTGAGACCTGGTTTTCCGCTGCCGATGCGGTGGACGCTGGGCTTGCTGATCGGGTCGATGGCAGAGTC GCCCAGGCTGTGTCCGTGGATCGGATCGCTGCGAAATACAACTATTCAGGTAGGCGTCTGCCACTTGATGAACGAAAGGA AAACGGCATGAGTGTGAAGGCTTTGGCTGCGGAGCTGGGTGTGAGTGAGTCTGAATTTAAGGCTACTTTCGCCCGGATCA TGAATGAGACAGTGGAAACCACTGTCAAGGTTGATGTGTCATATCCGCAGGATACGCGCATCGCACCGACTGAAACTGTG ACGGTTTACCCGATCGTGGGGCAGCCTGCTTCGGAAGCGTCAAGTGAGAATCCTGATGTTGCTGAAAATGCGGTCGATGG TGAGCCAATCCCTGTGGCTGCTGAGGTAATTGAGGGGATCACCTTTGAGCTTGGTGCTGAGGTTGAAGGGTTCACCACGT CGATTGATGCGCAGTCTGGGGCTTTGAAGATCACGGCATCGACTGGCGTTGAGATTGGCGCGGAAGCTGAGTTTGTTGTG TCAGTGTCTGGCACTGACGTTCCTGTCAAGGTGACGGTGCGTTCCTTGTCTGAGGAGCAGGAAGCTACCGAAGAAACCAC CGGCAGCGAGGTGGATGTCGTGGCTGTCGATAAGCACACCTACAACGCGCTTGTCGAGGGTAACCGGGCGTACAACAAGA TTTTGGAAAAGCAAGCAGTAGAACAACGCCACGCTCGGGTTGATCAGTGGATCAATCAGGGGCGTATCGCTGCATCTGCT CGTGATGAAGCAATCAAAGTGATTGATCGTGACGAGAACCTTGCTGCGGAGATCTACGGTTCACGTCCAGTAAACACCAT CCCACGTCGTGAGATGGGCAATGTTGGTTCCGGTGAACCGAAGTCCAAGGTTGAGGCGCTGATCGCTAAGGCCAATGAAA ACCGTAAGAACAGGAAGTAG
Upstream 100 bases:
>100_bases AGGCTAAGAAGTACTTGCGTGAGATTGAAGAAGAAAATGGTGTGACTTTGGGGGATGATCCTCAGCCATCTGCGACTGTT TTGGGGAGGGTGAAGAGTCT
Downstream 100 bases:
>100_bases GAAAAAATATGTCTAACGCAACATACAACGGCGCGATCTCATACGACGTGTCAGGAACTATCCCAAAGTTCAGCCTTGTA AAGCTCAATGCTGCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: ClpP Protease Family Protein; ATP-Dependent Clp Protease Proteolytic Subunit; Clp Protease Domain Protein; Clp Protease Domain-Containing Protein; Phage Clp-Protease; Protease/Scaffold Protein; ClpP Protease; Phage Protease; ClpP-Type Protease
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues METIDIYEDITPGLEVRVRDSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVVDGVAASAASIIAIAGSDELV MREGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANVYASKAGGDAEHWLGLMAAETWFSAADAVDAGLADRVDGRV AQAVSVDRIAAKYNYSGRRLPLDERKENGMSVKALAAELGVSESEFKATFARIMNETVETTVKVDVSYPQDTRIAPTETV TVYPIVGQPASEASSENPDVAENAVDGEPIPVAAEVIEGITFELGAEVEGFTTSIDAQSGALKITASTGVEIGAEAEFVV SVSGTDVPVKVTVRSLSEEQEATEETTGSEVDVVAVDKHTYNALVEGNRAYNKILEKQAVEQRHARVDQWINQGRIAASA RDEAIKVIDRDENLAAEIYGSRPVNTIPRREMGNVGSGEPKSKVEALIAKANENRKNRK
Sequences:
>Translated_459_residues METIDIYEDITPGLEVRVRDSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVVDGVAASAASIIAIAGSDELV MREGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANVYASKAGGDAEHWLGLMAAETWFSAADAVDAGLADRVDGRV AQAVSVDRIAAKYNYSGRRLPLDERKENGMSVKALAAELGVSESEFKATFARIMNETVETTVKVDVSYPQDTRIAPTETV TVYPIVGQPASEASSENPDVAENAVDGEPIPVAAEVIEGITFELGAEVEGFTTSIDAQSGALKITASTGVEIGAEAEFVV SVSGTDVPVKVTVRSLSEEQEATEETTGSEVDVVAVDKHTYNALVEGNRAYNKILEKQAVEQRHARVDQWINQGRIAASA RDEAIKVIDRDENLAAEIYGSRPVNTIPRREMGNVGSGEPKSKVEALIAKANENRKNRK >Mature_459_residues METIDIYEDITPGLEVRVRDSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVVDGVAASAASIIAIAGSDELV MREGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANVYASKAGGDAEHWLGLMAAETWFSAADAVDAGLADRVDGRV AQAVSVDRIAAKYNYSGRRLPLDERKENGMSVKALAAELGVSESEFKATFARIMNETVETTVKVDVSYPQDTRIAPTETV TVYPIVGQPASEASSENPDVAENAVDGEPIPVAAEVIEGITFELGAEVEGFTTSIDAQSGALKITASTGVEIGAEAEFVV SVSGTDVPVKVTVRSLSEEQEATEETTGSEVDVVAVDKHTYNALVEGNRAYNKILEKQAVEQRHARVDQWINQGRIAASA RDEAIKVIDRDENLAAEIYGSRPVNTIPRREMGNVGSGEPKSKVEALIAKANENRKNRK
Specific function: Unknown
COG id: COG0740
COG function: function code OU; Protease subunit of ATP-dependent Clp proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49044; Mature: 49044
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIDIYEDITPGLEVRVRDSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVV CCCCCCHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE DGVAASAASIIAIAGSDELVMREGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANV ECCHHCCEEEEEEECCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YASKAGGDAEHWLGLMAAETWFSAADAVDAGLADRVDGRVAQAVSVDRIAAKYNYSGRRL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC PLDERKENGMSVKALAAELGVSESEFKATFARIMNETVETTVKVDVSYPQDTRIAPTETV CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEE TVYPIVGQPASEASSENPDVAENAVDGEPIPVAAEVIEGITFELGAEVEGFTTSIDAQSG EEEEECCCCCHHCCCCCCCHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEECCCCC ALKITASTGVEIGAEAEFVVSVSGTDVPVKVTVRSLSEEQEATEETTGSEVDVVAVDKHT EEEEEECCCCEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCC YNALVEGNRAYNKILEKQAVEQRHARVDQWINQGRIAASARDEAIKVIDRDENLAAEIYG CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEC SRPVNTIPRREMGNVGSGEPKSKVEALIAKANENRKNRK CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure METIDIYEDITPGLEVRVRDSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVV CCCCCCHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE DGVAASAASIIAIAGSDELVMREGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANV ECCHHCCEEEEEEECCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YASKAGGDAEHWLGLMAAETWFSAADAVDAGLADRVDGRVAQAVSVDRIAAKYNYSGRRL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCC PLDERKENGMSVKALAAELGVSESEFKATFARIMNETVETTVKVDVSYPQDTRIAPTETV CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCEE TVYPIVGQPASEASSENPDVAENAVDGEPIPVAAEVIEGITFELGAEVEGFTTSIDAQSG EEEEECCCCCHHCCCCCCCHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEECCCCC ALKITASTGVEIGAEAEFVVSVSGTDVPVKVTVRSLSEEQEATEETTGSEVDVVAVDKHT EEEEEECCCCEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCC YNALVEGNRAYNKILEKQAVEQRHARVDQWINQGRIAASARDEAIKVIDRDENLAAEIYG CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEC SRPVNTIPRREMGNVGSGEPKSKVEALIAKANENRKNRK CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA