| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ispG [H]
Identifier: 145295917
GI number: 145295917
Start: 2046358
End: 2047539
Strand: Reverse
Name: ispG [H]
Synonym: cgR_1842
Alternate gene names: 145295917
Gene position: 2047539-2046358 (Counterclockwise)
Preceding gene: 145295918
Following gene: 145295914
Centisome position: 61.78
GC content: 57.02
Gene sequence:
>1182_bases TTGTCTACCCCAATCGGCCTTGGCCTTCCTCCGACCCCACCTCCAGTGTTGGCGCCACGTCGTAAAACACGCCAACTCAT GGTCGGCAAAGTGGGCGTTGGTTCGGATCACCCGATTTCCGTCCAGTCGATGACCACCACCAAAACCCACGACATCAACG GCACCCTGCAACAGATCGCACAGCTGACAGCCACCGGTTGTGACATCGTCCGCGTTGCCTGCCCAAAGACTGTTGATGCG GAAGCACTGCCGATCATCGCAAAGAAGTCTCCGATCCCAGTGATCGCAGATATCCACTTCCAGCCCAAGTACATCTTCGC GGCAATCGATGCAGGTTGCGCCGCCGTCCGTGTGAACCCAGGCAACATCAAGGAATTCGACGGCCGAGTCAAGGAAGTAG CCAAGGCTGCTGGCGACGCCGGAATCCCCATCCGCATTGGTGTCAACGGCGGATCCCTGGATAAGCGCATCCTGGACAAA TACCACGGCAAAGCCACCCCAGAAGCTCTCGTGGAATCCGCAATGTGGGAAGCCGGCCTGTTTGAAGAGCACGGCTTCGG CGACATCGCAATCTCTGTGAAGCACTCCGATCCAGTACTCATGGTGGAGGCCTACCGCCAGCTCGCTGAACAAAGCGACT ACCCACTGCACCTCGGTGTTACTGAAGCTGGTCCCAAGTTCATGGGAACCATCAAGTCTTCCGTAGCATTCGGCGCACTG CTGTCCCAGGGCATCGGCGACACTATCCGTGTGTCTCTTTCTGCTGACCCAGTGGAAGAAATCAAGGTTGGCGACCAGAT TCTGCAGTCCCTCAACCTGCGCCCACGCAAGCTGGAAATCGTGTCCTGCCCATCATGTGGCCGCGCACAGGTCGATGTGT ACTCACTTGCTGAAGAAGTCACCGAAGCACTCGACGGGATGGAAGTTCCACTGCGCGTCGCTGTCATGGGTTGCGTTGTT AACGGCCCAGGTGAGGCTCGCGACGCTGACCTCGGTGTTGCATCCGGTAACGGCAAGGGCCAGATCTTTGTCAAGGGCGA AGTCATCAAGACTGTCCCAGAATCCCAGATCGTGGAAACCCTCATCGAAGAAGCAATGCGTATCGCAGAGGAAATGGACC CAGAAGTCCTCGCTGCAGCAAGTGCTTCCGGTATGAAGGCTGAAGTGAAGGTAACCAAGTAA
Upstream 100 bases:
>100_bases AGGTGACGGTGATACAATTTTGCCATAACTGACTTAACCCAGAACGTTGTCCGGAAGCACACAGACCTTTGTGAGGCTTC CTTTTCTAGGAGCATGTAAC
Downstream 100 bases:
>100_bases GTTTTGGTTAATTAAGGCACCCGACTGGTTTGGTTAGTCGGGTGCTTTTTTGATGGGTAAATTCCGTAAACTAAACCAGA TGACTGGTGGGGAACGTGAG
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSTPIGLGLPPTPPPVLAPRRKTRQLMVGKVGVGSDHPISVQSMTTTKTHDINGTLQQIAQLTATGCDIVRVACPKTVDA EALPIIAKKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGDAGIPIRIGVNGGSLDKRILDK YHGKATPEALVESAMWEAGLFEEHGFGDIAISVKHSDPVLMVEAYRQLAEQSDYPLHLGVTEAGPKFMGTIKSSVAFGAL LSQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEVTEALDGMEVPLRVAVMGCVV NGPGEARDADLGVASGNGKGQIFVKGEVIKTVPESQIVETLIEEAMRIAEEMDPEVLAAASASGMKAEVKVTK
Sequences:
>Translated_393_residues MSTPIGLGLPPTPPPVLAPRRKTRQLMVGKVGVGSDHPISVQSMTTTKTHDINGTLQQIAQLTATGCDIVRVACPKTVDA EALPIIAKKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGDAGIPIRIGVNGGSLDKRILDK YHGKATPEALVESAMWEAGLFEEHGFGDIAISVKHSDPVLMVEAYRQLAEQSDYPLHLGVTEAGPKFMGTIKSSVAFGAL LSQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEVTEALDGMEVPLRVAVMGCVV NGPGEARDADLGVASGNGKGQIFVKGEVIKTVPESQIVETLIEEAMRIAEEMDPEVLAAASASGMKAEVKVTK >Mature_392_residues STPIGLGLPPTPPPVLAPRRKTRQLMVGKVGVGSDHPISVQSMTTTKTHDINGTLQQIAQLTATGCDIVRVACPKTVDAE ALPIIAKKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGDAGIPIRIGVNGGSLDKRILDKY HGKATPEALVESAMWEAGLFEEHGFGDIAISVKHSDPVLMVEAYRQLAEQSDYPLHLGVTEAGPKFMGTIKSSVAFGALL SQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEVTEALDGMEVPLRVAVMGCVVN GPGEARDADLGVASGNGKGQIFVKGEVIKTVPESQIVETLIEEAMRIAEEMDPEVLAAASASGMKAEVKVTK
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=359, Percent_Identity=44.2896935933148, Blast_Score=300, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 41493; Mature: 41362
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPIGLGLPPTPPPVLAPRRKTRQLMVGKVGVGSDHPISVQSMTTTKTHDINGTLQQIA CCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHH QLTATGCDIVRVACPKTVDAEALPIIAKKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNP HHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCEEEEECC GNIKEFDGRVKEVAKAAGDAGIPIRIGVNGGSLDKRILDKYHGKATPEALVESAMWEAGL CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC FEEHGFGDIAISVKHSDPVLMVEAYRQLAEQSDYPLHLGVTEAGPKFMGTIKSSVAFGAL CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHH LSQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEV HHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH TEALDGMEVPLRVAVMGCVVNGPGEARDADLGVASGNGKGQIFVKGEVIKTVPESQIVET HHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCEEECCCHHHHHHH LIEEAMRIAEEMDPEVLAAASASGMKAEVKVTK HHHHHHHHHHHCCHHHEECCCCCCCEEEEEEEC >Mature Secondary Structure STPIGLGLPPTPPPVLAPRRKTRQLMVGKVGVGSDHPISVQSMTTTKTHDINGTLQQIA CCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHH QLTATGCDIVRVACPKTVDAEALPIIAKKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNP HHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEECCCCEEEEECC GNIKEFDGRVKEVAKAAGDAGIPIRIGVNGGSLDKRILDKYHGKATPEALVESAMWEAGL CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC FEEHGFGDIAISVKHSDPVLMVEAYRQLAEQSDYPLHLGVTEAGPKFMGTIKSSVAFGAL CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHH LSQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYSLAEEV HHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH TEALDGMEVPLRVAVMGCVVNGPGEARDADLGVASGNGKGQIFVKGEVIKTVPESQIVET HHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCEEECCCHHHHHHH LIEEAMRIAEEMDPEVLAAASASGMKAEVKVTK HHHHHHHHHHHCCHHHEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]