Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is thrS [H]
Identifier: 145295791
GI number: 145295791
Start: 1908721
End: 1910781
Strand: Reverse
Name: thrS [H]
Synonym: cgR_1716
Alternate gene names: 145295791
Gene position: 1910781-1908721 (Counterclockwise)
Preceding gene: 145295792
Following gene: 145295790
Centisome position: 57.65
GC content: 55.22
Gene sequence:
>2061_bases GTGAACACCACAGATACCGCAGTAGCAAACCTTGTTGTTTTTGAGGTCCCTGCAGGCACCGCAATTGGTGCAGCAATGCG CGAACTAGATCTGCCCAACAAGGGTCCAGAGGCTATCGTTTGTGCAAAAGACGCTGAAGGCCAACTAAAGGATCTTTCAC ACGTCCCAGAAGCCACTGCTACGTTCACCGCTGTACCTGCAAATACTGATGACGGCCGCGCAGTAATCCGCCACTCGTGC GCTCACGTGCTGGCACAGGCTGTCCAGGCAGAATTCCCAGGAACCAAGTTGGGCATCGGCCCAGCCATTGAAAATGGTTT CTACTACGACTTTGATGTGGCTGAGCCTTTCACTCCGGAAGATCTCAAGACCATTGAAAAGCGGATGAAGAAGATCATCA AGACCGGCCAGAAGTTTGAGCGCCGCGTCTATGAATCCGCTGAAGCTGCAGCGGAAGAGTTGAAGAACGAGCCTTACAAG CTGGAACTTATCCAGGACAAGGGCAACGTTGATCCTAACTCTGATGAAGCCACCGAAGTGGGCGCAGGCGAACTGACCGC GTATGACAACGTCAACCCTCGCACCAGTGAGGTGGAGTGGTCGGATCTTTGCCGTGGACCACACATTCCAACCACCCGCT ACATTCCAGCATTCGCGTTGACTCGTTCGTCTGCTGCGTACTGGCGTGGCGATCAAGACAACGCTGGCCTGCAGCGCATC TATGGTACCGCGTGGGAGGATAAGGAATCCCTCGATGCCTACCAGACCATGCTCGCTGAGGCAGAAAAGCGCGATCACCG CCGTCTAGGCACCGAACTTGATTTGTTCTCCTTCCCAGATGATCTGGGCTCTGGTTTGCCAGTATTCCATCCCAACGGTG GCATCGTGCGCAATGAGATGGAAGATCACTCCCGTCGCCGCCACATCGCAGCCGGCTACTCCTTTGTGAACACCCCGCAC ATCACCAAGCAGGATCTCTTTGAGCGTTCCGGTCACCTTGGTTTCTACAAGGATGGTATGTTCCCTCCAATGCAGGTGGA TGCGGAATTCGACGAAGACGGCAATGTGACCAAGCCGGGCCAAGAGTACTACCTCAAGCCCATGAACTGCCCAATGCACA ACCTCATCTTCGATTCTCGTGGACGTTCTTACCGTGAGCTTCCACTGCGTCTTTTTGAGTTCGGCAACGTCTACCGCTAC GAAAAGTCCGGTGTGATCCACGGCCTGACCCGTGCCCGTGGCTTCACCCAGGACGATGCTCATATCTACTGCACCGAGGA TCAGCTGGAAGCAGAGCTCACCTCTGTACTGGACTTCATCCTGTCGCTGCTGCGTGACTACGGTTTGGATGATTTCTACC TGGAGCTCTCCACCCGCGATCCTAAGAAGTCAGTCGGTTCTGATGAGATCTGGGAGCGTTCCACTGAAATCTTGAACCGT GTGGCCACCAATTCTGGCCTGGAACTTGTTCCAGACCCAGAAGGTGCCGCATTCTACGGCCCTAAGATTTCTGTTCAGGC ACGCGACGCGATTGGCCGTACCTGGCAGATGTCCACCGTGCAGCTCGACTTCAACATGCCTGAGCGCTTCAACTTGGAAT ACACCTCATCTGATGGTTCCAAGCAGCAGCCCATCATGATCCACCGCGCACTGTTTGGTTCCATCGAGCGCTTCTTCGGC GTGTTGTTGGAGCACTACGCTGGTGCTTTCCCAGCATGGCTGGCACCTCACCAGGTCATGGGTATTCCAGTTGCTGATGA TTGCATTCCACACCTGGAGACAATCACCGCTCAGCTGCGTGAAAAGGGTATCCGCGCAGACGTGGACACCTCCGATGATC GCATGCAGAAGAAGATCCGCAACCACACCACCGGCAAGGTTCCATTCATGCTGCTTGCCGGTGCCCGCGATGTGGAAGCA AACGCAGTGAGCTTCCGTTTCTTGGACGGCACCCAGGTCAACGGCGTGCCCGTCGATGAGGCAATCGCTGTGATTTCTTC CTGGATTGGTGACCGCATCAACGATCAGCCGAGCGAGGACTCCATTGCAGCTCGCAGGTAG
Upstream 100 bases:
>100_bases GGACGTATCGGGAGCGCCAGGTCAGCTGCGCACCTTGAACTAGTGGGGGCGGCCAGGTATGCCGTTTGCCCACGTGAGCG CACGAAGGAGCGCAATTTTC
Downstream 100 bases:
>100_bases CCCTGAGATGGACTCATCTGACAGCCACGTTGGTCAGGATGTATATGTTGATCAAGGTCTAGGGGAGCCCGACAGACTGG AACGTCTGTGGGCGCCCTAC
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MNTTDTAVANLVVFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATATFTAVPANTDDGRAVIRHSC AHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERRVYESAEAAAEELKNEPYK LELIQDKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRGDQDNAGLQRI YGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPH ITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRY EKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNR VATNSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFG VLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEA NAVSFRFLDGTQVNGVPVDEAIAVISSWIGDRINDQPSEDSIAARR
Sequences:
>Translated_686_residues MNTTDTAVANLVVFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATATFTAVPANTDDGRAVIRHSC AHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERRVYESAEAAAEELKNEPYK LELIQDKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRGDQDNAGLQRI YGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPH ITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRY EKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNR VATNSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFG VLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEA NAVSFRFLDGTQVNGVPVDEAIAVISSWIGDRINDQPSEDSIAARR >Mature_686_residues MNTTDTAVANLVVFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATATFTAVPANTDDGRAVIRHSC AHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPEDLKTIEKRMKKIIKTGQKFERRVYESAEAAAEELKNEPYK LELIQDKGNVDPNSDEATEVGAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRGDQDNAGLQRI YGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEMEDHSRRRHIAAGYSFVNTPH ITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPGQEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRY EKSGVIHGLTRARGFTQDDAHIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNR VATNSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGSKQQPIMIHRALFGSIERFFG VLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLREKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEA NAVSFRFLDGTQVNGVPVDEAIAVISSWIGDRINDQPSEDSIAARR
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=629, Percent_Identity=36.724960254372, Blast_Score=392, Evalue=1e-109, Organism=Homo sapiens, GI38202255, Length=608, Percent_Identity=36.8421052631579, Blast_Score=384, Evalue=1e-106, Organism=Homo sapiens, GI20070344, Length=628, Percent_Identity=35.6687898089172, Blast_Score=344, Evalue=2e-94, Organism=Escherichia coli, GI1788013, Length=641, Percent_Identity=37.9095163806552, Blast_Score=466, Evalue=1e-132, Organism=Caenorhabditis elegans, GI71984192, Length=650, Percent_Identity=35.0769230769231, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71984184, Length=650, Percent_Identity=35.0769230769231, Blast_Score=385, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6322112, Length=667, Percent_Identity=36.2818590704648, Blast_Score=400, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322654, Length=400, Percent_Identity=33.75, Blast_Score=239, Evalue=1e-63, Organism=Drosophila melanogaster, GI24583842, Length=623, Percent_Identity=35.7945425361156, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI28574141, Length=623, Percent_Identity=35.7945425361156, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24583839, Length=621, Percent_Identity=35.9098228663446, Blast_Score=392, Evalue=1e-109,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 76632; Mature: 76632
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTDTAVANLVVFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATA CCCCHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCE TFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHH DLKTIEKRMKKIIKTGQKFERRVYESAEAAAEELKNEPYKLELIQDKGNVDPNSDEATEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHC GAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRGDQDNAGLQRI CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEECCCCCEECCCCCCCCHHHH YGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEM HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEECCCCCEECCHH EDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCEECCCCCCCCCCCCCC QEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDA HHHEECCCCCCHHHHEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCC HIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNR EEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHH VATNSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGS HHCCCCCEEEECCCCCEEECCEEEEEEHHHCCCEEEEEEEEEECCCCCCCCEEEECCCCC KQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHH EKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDE HCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHH AIAVISSWIGDRINDQPSEDSIAARR HHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTTDTAVANLVVFEVPAGTAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPEATA CCCCHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCE TFTAVPANTDDGRAVIRHSCAHVLAQAVQAEFPGTKLGIGPAIENGFYYDFDVAEPFTPE EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHH DLKTIEKRMKKIIKTGQKFERRVYESAEAAAEELKNEPYKLELIQDKGNVDPNSDEATEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHC GAGELTAYDNVNPRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRGDQDNAGLQRI CCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEECCCCCEECCCCCCCCHHHH YGTAWEDKESLDAYQTMLAEAEKRDHRRLGTELDLFSFPDDLGSGLPVFHPNGGIVRNEM HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEECCCCCEECCHH EDHSRRRHIAAGYSFVNTPHITKQDLFERSGHLGFYKDGMFPPMQVDAEFDEDGNVTKPG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCEECCCCCCCCCCCCCC QEYYLKPMNCPMHNLIFDSRGRSYRELPLRLFEFGNVYRYEKSGVIHGLTRARGFTQDDA HHHEECCCCCCHHHHEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCC HIYCTEDQLEAELTSVLDFILSLLRDYGLDDFYLELSTRDPKKSVGSDEIWERSTEILNR EEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHH VATNSGLELVPDPEGAAFYGPKISVQARDAIGRTWQMSTVQLDFNMPERFNLEYTSSDGS HHCCCCCEEEECCCCCEEECCEEEEEEHHHCCCEEEEEEEEEECCCCCCCCEEEECCCCC KQQPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVMGIPVADDCIPHLETITAQLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHH EKGIRADVDTSDDRMQKKIRNHTTGKVPFMLLAGARDVEANAVSFRFLDGTQVNGVPVDE HCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHH AIAVISSWIGDRINDQPSEDSIAARR HHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]