Click here to switch to the map view.

The map label for this gene is abgA [C]

Identifier: 145294860

GI number: 145294860

Start: 890647

End: 891831

Strand: Direct

Name: abgA [C]

Synonym: cgR_0807

Alternate gene names: 145294860

Gene position: 890647-891831 (Clockwise)

Preceding gene: 145294858

Following gene: 145294861

Centisome position: 26.87

GC content: 56.96

Gene sequence:

>1185_bases
ATGGAAATTGGTGCGCAGGTTGCCTCATGGATGGACCGCCACCATGACGAGGTCATTAAGTGGCGCAGGCATTTGCACAG
CCATCCTGAGCTCTCCCACATGGAATACCGCACGACTGAGTATTTGGCCTCGGTTCTGAAAGATCACGGCATGGAACCAC
ACCTGTTCCCAGGAACCGGTTTGATGGTGGATATCGGACCAGAAGGGGACTCCCGCCTGGCGTTTCGTGCTGATATCGAT
GCCCTTCCGCTGCTTGAATCAACCGGCTTAGAGTTCTCTTCCACAGCCACTGGCGTTGCGCATGCCTGCGGACATGACGT
GCACACGGTGATCGCTTTGGCACTTGCCTGTGCACTGAACACCATCGAACTGCCCATCGGCATTCGGGTGATTTTCCAGC
CGGCAGAAGAAGTCATGACTGGTGGCGCAACGGACGTCATTGCCCACGGTGGCCTTGATGGTGTGGATGCGATTTACGCC
ATCCACGTTGAACCCAAATTGAAGGTCGGTCGCGTCGGGGTACGCGCTGGCGCGATTACTTCTGCCTCAGATGTGATCGA
AATCAGAGTCAAGGGTGAAGGAGGACATAGCGCACGTCCACACCTCTCCGCTGATGTTGTTTACGCCTTGAGCAAATTGG
TCGTTGATCTTCCCGGTTTGCTGTCCAGGCGCGTCGATCCACGCACCGGCACCGTGCTCGTTTTCGGCACCATCAACGCC
GGCTATGCGCCCAACGCGATCCCAGATTCCGGCATCGTGTCAGGCACCTTGCGTACAGCCGACATCTCTACCTGGCGTGA
CATGCGTCCGCTTATCTCTGAGCTGGTGGAACAGGTGCTCGCACCCACCGGAGTCACCCATGAACTGATCTACAATCCGG
GTGTTCCACCAGTGCTTAACGACGATGTCGCCACCGCTTTGTTGGCAAGCGCAGCACGCGACATGGACACGCAATCTGTT
GTCCAAGCGCCGCAGTCATCGGGTGGAGAAGACTTCTCGTGGTACCTCGAACACGTCCCAGGATCAATGGCCCGGTTGGG
TTGCTGGCCGGGGCACGGACCCAAGCAAGACCTCCATCAAAGTGACCTGGTTGTGGATGAGCGAGCCATCGGAGTTGGCG
TCAGGCTCTTTGGCTCCCTTGTGCAGCAGTACAGTAGCCGATCTGAAGCTTTCTTAAATTCCTAA

Upstream 100 bases:

>100_bases
CCGATCCTTTGTTTTCGTGGGATCACTATTAGACTCGACTCTACCGCGCTGCAGGTTTTCCTGATACGCCTGCGGACAAA
ACAGAAAGGTATTTCACGTG

Downstream 100 bases:

>100_bases
TGGGGGTAGTGTGTAGGGCTGGCTCTAAATTGCTGACACGTCACCCAGGCTAATTCAGCAGTAATCATTTAGACTTGGAA
CCGCTTACCAGTGGTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MEIGAQVASWMDRHHDEVIKWRRHLHSHPELSHMEYRTTEYLASVLKDHGMEPHLFPGTGLMVDIGPEGDSRLAFRADID
ALPLLESTGLEFSSTATGVAHACGHDVHTVIALALACALNTIELPIGIRVIFQPAEEVMTGGATDVIAHGGLDGVDAIYA
IHVEPKLKVGRVGVRAGAITSASDVIEIRVKGEGGHSARPHLSADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGTINA
GYAPNAIPDSGIVSGTLRTADISTWRDMRPLISELVEQVLAPTGVTHELIYNPGVPPVLNDDVATALLASAARDMDTQSV
VQAPQSSGGEDFSWYLEHVPGSMARLGCWPGHGPKQDLHQSDLVVDERAIGVGVRLFGSLVQQYSSRSEAFLNS

Sequences:

>Translated_394_residues
MEIGAQVASWMDRHHDEVIKWRRHLHSHPELSHMEYRTTEYLASVLKDHGMEPHLFPGTGLMVDIGPEGDSRLAFRADID
ALPLLESTGLEFSSTATGVAHACGHDVHTVIALALACALNTIELPIGIRVIFQPAEEVMTGGATDVIAHGGLDGVDAIYA
IHVEPKLKVGRVGVRAGAITSASDVIEIRVKGEGGHSARPHLSADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGTINA
GYAPNAIPDSGIVSGTLRTADISTWRDMRPLISELVEQVLAPTGVTHELIYNPGVPPVLNDDVATALLASAARDMDTQSV
VQAPQSSGGEDFSWYLEHVPGSMARLGCWPGHGPKQDLHQSDLVVDERAIGVGVRLFGSLVQQYSSRSEAFLNS
>Mature_394_residues
MEIGAQVASWMDRHHDEVIKWRRHLHSHPELSHMEYRTTEYLASVLKDHGMEPHLFPGTGLMVDIGPEGDSRLAFRADID
ALPLLESTGLEFSSTATGVAHACGHDVHTVIALALACALNTIELPIGIRVIFQPAEEVMTGGATDVIAHGGLDGVDAIYA
IHVEPKLKVGRVGVRAGAITSASDVIEIRVKGEGGHSARPHLSADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGTINA
GYAPNAIPDSGIVSGTLRTADISTWRDMRPLISELVEQVLAPTGVTHELIYNPGVPPVLNDDVATALLASAARDMDTQSV
VQAPQSSGGEDFSWYLEHVPGSMARLGCWPGHGPKQDLHQSDLVVDERAIGVGVRLFGSLVQQYSSRSEAFLNS

Specific function: ATP-dependent carboxylate-amine ligase [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011793
- InterPro:   IPR006336
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF04107 GCS2; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42170; Mature: 42170

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGAQVASWMDRHHDEVIKWRRHLHSHPELSHMEYRTTEYLASVLKDHGMEPHLFPGTG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LMVDIGPEGDSRLAFRADIDALPLLESTGLEFSSTATGVAHACGHDVHTVIALALACALN
EEEEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
TIELPIGIRVIFQPAEEVMTGGATDVIAHGGLDGVDAIYAIHVEPKLKVGRVGVRAGAIT
HEECCCCEEEEECCHHHHHCCCCHHHHCCCCCCCCCEEEEEEECCCCEECCEEEECCCCC
SASDVIEIRVKGEGGHSARPHLSADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGTINA
CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GYAPNAIPDSGIVSGTLRTADISTWRDMRPLISELVEQVLAPTGVTHELIYNPGVPPVLN
CCCCCCCCCCCCEECEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCC
DDVATALLASAARDMDTQSVVQAPQSSGGEDFSWYLEHVPGSMARLGCWPGHGPKQDLHQ
HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCHHHHCH
SDLVVDERAIGVGVRLFGSLVQQYSSRSEAFLNS
HCCEECHHHHHHHHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure
MEIGAQVASWMDRHHDEVIKWRRHLHSHPELSHMEYRTTEYLASVLKDHGMEPHLFPGTG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LMVDIGPEGDSRLAFRADIDALPLLESTGLEFSSTATGVAHACGHDVHTVIALALACALN
EEEEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
TIELPIGIRVIFQPAEEVMTGGATDVIAHGGLDGVDAIYAIHVEPKLKVGRVGVRAGAIT
HEECCCCEEEEECCHHHHHCCCCHHHHCCCCCCCCCEEEEEEECCCCEECCEEEECCCCC
SASDVIEIRVKGEGGHSARPHLSADVVYALSKLVVDLPGLLSRRVDPRTGTVLVFGTINA
CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
GYAPNAIPDSGIVSGTLRTADISTWRDMRPLISELVEQVLAPTGVTHELIYNPGVPPVLN
CCCCCCCCCCCCEECEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCC
DDVATALLASAARDMDTQSVVQAPQSSGGEDFSWYLEHVPGSMARLGCWPGHGPKQDLHQ
HHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCHHHHCH
SDLVVDERAIGVGVRLFGSLVQQYSSRSEAFLNS
HCCEECHHHHHHHHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA