Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yicG [C]
Identifier: 145294845
GI number: 145294845
Start: 875928
End: 876587
Strand: Direct
Name: yicG [C]
Synonym: cgR_0792
Alternate gene names: 145294845
Gene position: 875928-876587 (Clockwise)
Preceding gene: 145294844
Following gene: 145294846
Centisome position: 26.43
GC content: 53.94
Gene sequence:
>660_bases ATGCTGCTGACAATTCTATGGGCCATCGGCATCACAGCCGAAGGCATGACAGGCGCGCTGGCCGCAGGCCGACAAAAAAT GGATCTCTTCGGAGTATCCGTCATCGCATGCGTTACCGCGATCGGCGGCGGATCCATCCGCGACATGCTGCTGGGACATT ACCCGCTGGTGTGGGTGGAAAAGCCACTGTATCTACTGCTGATCATTGGCGCAGCCATTTTGACAGTGTCCATTTCCTTC CTGATGGAGCACTTCCGTGTGTTGTTCCTCGTGCTCGACGCCGTGGGTCTTTCTGCATTCGCTGTGATCGGCACACAAAT CGCACTGGAAATGGGCTACGGATTCATCATCGCAGTAGTGGCATCAGTGCTCACAGGTGTATTCGGCGGCGTCATGCGTG ACCTTTTGTGTGACCGCATCCCACTGGTATTTCAAAAAGAGCTCTACGCATCAATCGCATTCCTCGCCACCTGCGTCTAC TTTGCGATGATGTACCTTGGAGCTTCCGAAAACGTCACCGTCCTGGTCTCTGTGGTGGTTGCCTTTGTAGTCCGACTGCT ATCCATCTGGCGCGGATGGAGCCTCCCCGTATTCGACTACCAAGAACGCGAATACAAACGAGATCCCAAAATGCGTCTAT GGAGAATGTTCCGGAAGTAA
Upstream 100 bases:
>100_bases GCGATGCTCGAACGCGCAGAACGCTCCTGGGTAGACAAAGCCACTGCATACGATTTGCGCTGGTCAGATCACTCACCACT GAACGTGATCTACTCCTAAA
Downstream 100 bases:
>100_bases GGGTTTTGCACTCGGGGGAAAATTTTACTACCCCTAATTGCAGAAGTTCCTTAAAATACGGGTAAGGTCAGATCAGAAAA CATCAATGAGGATGTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MLLTILWAIGITAEGMTGALAAGRQKMDLFGVSVIACVTAIGGGSIRDMLLGHYPLVWVEKPLYLLLIIGAAILTVSISF LMEHFRVLFLVLDAVGLSAFAVIGTQIALEMGYGFIIAVVASVLTGVFGGVMRDLLCDRIPLVFQKELYASIAFLATCVY FAMMYLGASENVTVLVSVVVAFVVRLLSIWRGWSLPVFDYQEREYKRDPKMRLWRMFRK
Sequences:
>Translated_219_residues MLLTILWAIGITAEGMTGALAAGRQKMDLFGVSVIACVTAIGGGSIRDMLLGHYPLVWVEKPLYLLLIIGAAILTVSISF LMEHFRVLFLVLDAVGLSAFAVIGTQIALEMGYGFIIAVVASVLTGVFGGVMRDLLCDRIPLVFQKELYASIAFLATCVY FAMMYLGASENVTVLVSVVVAFVVRLLSIWRGWSLPVFDYQEREYKRDPKMRLWRMFRK >Mature_219_residues MLLTILWAIGITAEGMTGALAAGRQKMDLFGVSVIACVTAIGGGSIRDMLLGHYPLVWVEKPLYLLLIIGAAILTVSISF LMEHFRVLFLVLDAVGLSAFAVIGTQIALEMGYGFIIAVVASVLTGVFGGVMRDLLCDRIPLVFQKELYASIAFLATCVY FAMMYLGASENVTVLVSVVVAFVVRLLSIWRGWSLPVFDYQEREYKRDPKMRLWRMFRK
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=205, Percent_Identity=54.6341463414634, Blast_Score=220, Evalue=6e-59, Organism=Escherichia coli, GI1786352, Length=197, Percent_Identity=35.5329949238579, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 24243; Mature: 24243
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTILWAIGITAEGMTGALAAGRQKMDLFGVSVIACVTAIGGGSIRDMLLGHYPLVWVE CHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEHH KPLYLLLIIGAAILTVSISFLMEHFRVLFLVLDAVGLSAFAVIGTQIALEMGYGFIIAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLTGVFGGVMRDLLCDRIPLVFQKELYASIAFLATCVYFAMMYLGASENVTVLVSVVV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AFVVRLLSIWRGWSLPVFDYQEREYKRDPKMRLWRMFRK HHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MLLTILWAIGITAEGMTGALAAGRQKMDLFGVSVIACVTAIGGGSIRDMLLGHYPLVWVE CHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEHH KPLYLLLIIGAAILTVSISFLMEHFRVLFLVLDAVGLSAFAVIGTQIALEMGYGFIIAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLTGVFGGVMRDLLCDRIPLVFQKELYASIAFLATCVYFAMMYLGASENVTVLVSVVV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AFVVRLLSIWRGWSLPVFDYQEREYKRDPKMRLWRMFRK HHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]