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The map label for this gene is ybjT [H]

Identifier: 145294800

GI number: 145294800

Start: 821979

End: 823502

Strand: Direct

Name: ybjT [H]

Synonym: cgR_0747

Alternate gene names: 145294800

Gene position: 821979-823502 (Clockwise)

Preceding gene: 145294799

Following gene: 145294807

Centisome position: 24.8

GC content: 48.56

Gene sequence:

>1524_bases
ATGGATAATCAACTTCTTCCCACTTTGCATTATCAAGCTCAAAACCCGCACCGGCGAGTGCTGGTCACCGGTGCGACAGG
CTACATTGGCGGCAGGTTGATTACTGAGTTACTTGCTGCCGGTTTCCAAGTTCGGGCCACCTCGAGGAAAAAAACAAGTC
TTCAGCGCTTTGACTGGTACGAGGACGTCGAGGCAGTGGAAGCGGACCTGACTGACGCGACTGAGTTAGACACGTTATTT
AAGGATGTAGACGTTGTTTACTATCTAGTGCATTCCATGGGCGGCAAGGATGTTGATTTTGAAGAGCAAGAGCAGCTCAC
TGCTAAAAATGTCATCCAAGCTGCTGATCAAGCCGGGATAAAACAGATTGTCTACCTTTCCGGCTTACACCCGCGTAATC
GAAAAATAGAAGAACTATCTAAGCACATGCGCTCACGGGAAAAGGTCGCCCAGATTTTGCTGGCTGGCCAGACACCAGCT
TTAATTTTAAGGGCTGCCACAATTATTGGTTCCGGCTCTGCATCATTTGAAATAATCCGTCATCTCACGGAGCGTTTGCC
TAGAATGATAGCGCCTCAGTGGATTACTAATCAGATTGAGCCTTTAGCAATACGGGATGTTTTGCATTACCTAATCTCGG
CGGCTGATTTAAAGGATCCAGTCAACCGCTCCTGTGATATTGGCTGCGGAAAGTCGTATGAATTTGCGGATTTATTGCGT
ATCTATGCTGATGTTCGGGGACTGAAACGTCATGTAAATTCCGTTCCTCTCAATTTGCCCATGGACAAGCTATCCGGTCT
CTGGATTAGTCTAGTGACACCTGTTCCATTTCAATTGTCTTTCCCCTTAGCTCAATCAATGGCTGAGGATGCCGTCACTG
AAGAGCACAGCATTAAAGATATTATTTCAGATCCACCCGATGGTTTTATTGAGTATCGGGAAGCAGTGGAGCTGGCATTA
GCTGCAGAGTTTGATCGTGGAGTTCCAACGTCATGGGATCGAAGCTGGACTGTACAACAACCGTGGGCTAGCCAACCTAC
CGATCCAGAGTGGGCGGGCAAAGCTGTTTATGAAGACGTCCGCACAGAAGATACTGATCTCCGAGCAGCGCAGGTCTGGC
CGATCATTGAAGGTTTGGGTGGCGTGAACGGCTGGTATTCTGCACCACTGCTATGGCGATTGCGGGGTATCGCTGACAGA
CTCATCGGCGGTCCAGGTTTGGGCGGACGGCGGGATCCCCGTCATTTGAAACTTGGGGATCGCATTGATTGGTGGCGGGT
TACTGAGATCGATCCACCACATAGATTAGTGCTCACCGCAGAGATGAAAGTAGATGGTGGCGCTTGGCTGATCCTAGAAG
TCGAGGACAAAGAAAATGGCGGATGTACTTATACCCAACGCGCAATATTTGAGCCGAAGGGTTTGCCCGGTTATCTCTAT
TGGTGGGTTGTTTCACCGTTCCATGCGATTATTTTTCCTTATATGCGTTCGAATATTTTAAAAGCTGCGCGTAAACTCAC
TTAA

Upstream 100 bases:

>100_bases
TAGTAGGTAGTTTTGAATGGGGGAAGAATTTCATAGAAATCGCACTCGATTCACTAAAGACCCAAGAGTAAAATCCCAGG
ATTTGCTTATACTTGCGCTC

Downstream 100 bases:

>100_bases
TCGCAGAGTAGGCGTCTAAAGCAATTTGACGGGATTCCTTCAGATCGACGATGGGATCCGGATATGATGGTGTTCCATAT
TCGGGTACCCAGCGACGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MDNQLLPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRKKTSLQRFDWYEDVEAVEADLTDATELDTLF
KDVDVVYYLVHSMGGKDVDFEEQEQLTAKNVIQAADQAGIKQIVYLSGLHPRNRKIEELSKHMRSREKVAQILLAGQTPA
LILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHYLISAADLKDPVNRSCDIGCGKSYEFADLLR
IYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAEDAVTEEHSIKDIISDPPDGFIEYREAVELAL
AAEFDRGVPTSWDRSWTVQQPWASQPTDPEWAGKAVYEDVRTEDTDLRAAQVWPIIEGLGGVNGWYSAPLLWRLRGIADR
LIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWLILEVEDKENGGCTYTQRAIFEPKGLPGYLY
WWVVSPFHAIIFPYMRSNILKAARKLT

Sequences:

>Translated_507_residues
MDNQLLPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRKKTSLQRFDWYEDVEAVEADLTDATELDTLF
KDVDVVYYLVHSMGGKDVDFEEQEQLTAKNVIQAADQAGIKQIVYLSGLHPRNRKIEELSKHMRSREKVAQILLAGQTPA
LILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHYLISAADLKDPVNRSCDIGCGKSYEFADLLR
IYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAEDAVTEEHSIKDIISDPPDGFIEYREAVELAL
AAEFDRGVPTSWDRSWTVQQPWASQPTDPEWAGKAVYEDVRTEDTDLRAAQVWPIIEGLGGVNGWYSAPLLWRLRGIADR
LIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWLILEVEDKENGGCTYTQRAIFEPKGLPGYLY
WWVVSPFHAIIFPYMRSNILKAARKLT
>Mature_507_residues
MDNQLLPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRKKTSLQRFDWYEDVEAVEADLTDATELDTLF
KDVDVVYYLVHSMGGKDVDFEEQEQLTAKNVIQAADQAGIKQIVYLSGLHPRNRKIEELSKHMRSREKVAQILLAGQTPA
LILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHYLISAADLKDPVNRSCDIGCGKSYEFADLLR
IYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAEDAVTEEHSIKDIISDPPDGFIEYREAVELAL
AAEFDRGVPTSWDRSWTVQQPWASQPTDPEWAGKAVYEDVRTEDTDLRAAQVWPIIEGLGGVNGWYSAPLLWRLRGIADR
LIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWLILEVEDKENGGCTYTQRAIFEPKGLPGYLY
WWVVSPFHAIIFPYMRSNILKAARKLT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=490, Percent_Identity=30.4081632653061, Blast_Score=228, Evalue=9e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 57119; Mature: 57119

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQLLPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRKKTSLQRFDWY
CCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCHH
EDVEAVEADLTDATELDTLFKDVDVVYYLVHSMGGKDVDFEEQEQLTAKNVIQAADQAGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KQIVYLSGLHPRNRKIEELSKHMRSREKVAQILLAGQTPALILRAATIIGSGSASFEIIR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
HLTERLPRMIAPQWITNQIEPLAIRDVLHYLISAADLKDPVNRSCDIGCGKSYEFADLLR
HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
IYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAEDAVTEEHSIKD
HHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHH
IISDPPDGFIEYREAVELALAAEFDRGVPTSWDRSWTVQQPWASQPTDPEWAGKAVYEDV
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
RTEDTDLRAAQVWPIIEGLGGVNGWYSAPLLWRLRGIADRLIGGPGLGGRRDPRHLKLGD
CCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC
RIDWWRVTEIDPPHRLVLTAEMKVDGGAWLILEVEDKENGGCTYTQRAIFEPKGLPGYLY
CCCCEEEECCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCEEEHHHEECCCCCCCEEE
WWVVSPFHAIIFPYMRSNILKAARKLT
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNQLLPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRKKTSLQRFDWY
CCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCHH
EDVEAVEADLTDATELDTLFKDVDVVYYLVHSMGGKDVDFEEQEQLTAKNVIQAADQAGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KQIVYLSGLHPRNRKIEELSKHMRSREKVAQILLAGQTPALILRAATIIGSGSASFEIIR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
HLTERLPRMIAPQWITNQIEPLAIRDVLHYLISAADLKDPVNRSCDIGCGKSYEFADLLR
HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
IYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAEDAVTEEHSIKD
HHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHH
IISDPPDGFIEYREAVELALAAEFDRGVPTSWDRSWTVQQPWASQPTDPEWAGKAVYEDV
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
RTEDTDLRAAQVWPIIEGLGGVNGWYSAPLLWRLRGIADRLIGGPGLGGRRDPRHLKLGD
CCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC
RIDWWRVTEIDPPHRLVLTAEMKVDGGAWLILEVEDKENGGCTYTQRAIFEPKGLPGYLY
CCCCEEEECCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCEEEHHHEECCCCCCCEEE
WWVVSPFHAIIFPYMRSNILKAARKLT
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]