Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is eccB3 [H]
Identifier: 145294741
GI number: 145294741
Start: 747095
End: 748354
Strand: Direct
Name: eccB3 [H]
Synonym: cgR_0689
Alternate gene names: 145294741
Gene position: 747095-748354 (Clockwise)
Preceding gene: 145294740
Following gene: 145294742
Centisome position: 22.54
GC content: 60.71
Gene sequence:
>1260_bases ATGGCTGAAGGCATGTTGATGCCCACGACATCGGCGCAGGTGTCGGGGCATAAATTTCTGGTGCGGCGCATCGAACATGG GTTGGTGATGGGCGATGTGCGCATGATTCATGATCCACTTGGTAGGCGCCGCCGGGCGTTGGTGTTTGGGGTGGTGGCGT GCGTAATGCTGGCCGTAGGCTCGTTGGCGTTGGCTATTTTTCGACCCGCGAAGGATCCGGCCGATGCACCGTTGATCCGC TCTGAATCCGGCGCGCTGTTTGTGCAGCTGGATGGGTCGGTGCATCCGGTGGCTAATGTGGCCTCGGCTCGGTTGATTGT GGGGGAGCCGGTGGATCCGGTGAATGCCAGCGATGCGATCATCGCGGGCATGCCGCGCGGAGTGCCGGTGGGGGTTTCTG ATGCGCCGGGGCTTTTCAGCAGCGCCAAAGAACCCGAGCAAGATTGGTTTGTGTGCCAGGATGTCGGCACTGGGGATCTA CACATTACGGTTCCTAGGGGCGGACTAGGGCCCACCCTGATTGCGGAAGGAAATGGGTGGCTGGGGGCGTCGAAAAGCGA AACCGGCGAGGTCACCTGGAACCTTATTACCGCGGATGGGCGCCGCGAACTGCCGGCGTGGGGCAGCGAACATGGGCGCA TTACGCGCCGCCACCTGGGGATTTCCGAGGACACCCCGCGCATTTATCTGACCACTGAGCTGCTCAACGCGATCCCCGAG CACGACGCGGTCCGCTTCCCAGACCCGCTGCCCGAGCTTGTCGACGCCTCCACCCGCAGCTGGTTGCGGCTCGACGGGGC GCTCGCCGAAATCACGCCGCTACAGCGCGGGTTGCTTATCGACGCCGGTTCCGGTGTTTTCCCCGACCCCACCGCGCTTC TTGGAGTGCATGAAGAAACAGCCAACACCTTGACGCTGCCCGAGCAAACAGTTTCTTGGCAAGATCTGGACGGTGGTTTT GCCTGCGCGGATGGTGAAGGCCAGATCGGTTTCCTGGAAACTCTGGAATCGGGGGTGGCACTATCTGGTGATTCCAGGGC GAAAAGTTTCAGCACAAACGCTGGTGGGGCAGTGGGCGTGGACAGTGGCTTTGGCTACTATGTGGTCTCTGAATTTGGGC TGATGCACCCTGTTTCTACTGGTGAATCGATGGTTGCCCTAGGAATCACTGACGTGCAGGTCGTGCCGTGGAGTGTGCTG CGATTGTTGCCGCAGGGAAGTGAATTAGCAAAAGAGACAGCGCTCGCGCCCACCTATTAA
Upstream 100 bases:
>100_bases GCAAATCTGAGAATCTTCCCACTTTCACTAGTCTTTTCCCTGGCCAGCGCACTACAGTTCCTGGATTAGGGGATGTAAAG ATCTAAAGCTGGGGGAATAC
Downstream 100 bases:
>100_bases GGAGTATGGTGGCCTTACATGAGCGGATTAGTTGACCCGGATAGTACTTTTTTAAAGACCATCGGAAAACTGAGCAACAG CTTGTCCATTGGTCGTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B3; Type VII secretion system protein eccB3; T7SS protein eccB3 [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAEGMLMPTTSAQVSGHKFLVRRIEHGLVMGDVRMIHDPLGRRRRALVFGVVACVMLAVGSLALAIFRPAKDPADAPLIR SESGALFVQLDGSVHPVANVASARLIVGEPVDPVNASDAIIAGMPRGVPVGVSDAPGLFSSAKEPEQDWFVCQDVGTGDL HITVPRGGLGPTLIAEGNGWLGASKSETGEVTWNLITADGRRELPAWGSEHGRITRRHLGISEDTPRIYLTTELLNAIPE HDAVRFPDPLPELVDASTRSWLRLDGALAEITPLQRGLLIDAGSGVFPDPTALLGVHEETANTLTLPEQTVSWQDLDGGF ACADGEGQIGFLETLESGVALSGDSRAKSFSTNAGGAVGVDSGFGYYVVSEFGLMHPVSTGESMVALGITDVQVVPWSVL RLLPQGSELAKETALAPTY
Sequences:
>Translated_419_residues MAEGMLMPTTSAQVSGHKFLVRRIEHGLVMGDVRMIHDPLGRRRRALVFGVVACVMLAVGSLALAIFRPAKDPADAPLIR SESGALFVQLDGSVHPVANVASARLIVGEPVDPVNASDAIIAGMPRGVPVGVSDAPGLFSSAKEPEQDWFVCQDVGTGDL HITVPRGGLGPTLIAEGNGWLGASKSETGEVTWNLITADGRRELPAWGSEHGRITRRHLGISEDTPRIYLTTELLNAIPE HDAVRFPDPLPELVDASTRSWLRLDGALAEITPLQRGLLIDAGSGVFPDPTALLGVHEETANTLTLPEQTVSWQDLDGGF ACADGEGQIGFLETLESGVALSGDSRAKSFSTNAGGAVGVDSGFGYYVVSEFGLMHPVSTGESMVALGITDVQVVPWSVL RLLPQGSELAKETALAPTY >Mature_418_residues AEGMLMPTTSAQVSGHKFLVRRIEHGLVMGDVRMIHDPLGRRRRALVFGVVACVMLAVGSLALAIFRPAKDPADAPLIRS ESGALFVQLDGSVHPVANVASARLIVGEPVDPVNASDAIIAGMPRGVPVGVSDAPGLFSSAKEPEQDWFVCQDVGTGDLH ITVPRGGLGPTLIAEGNGWLGASKSETGEVTWNLITADGRRELPAWGSEHGRITRRHLGISEDTPRIYLTTELLNAIPEH DAVRFPDPLPELVDASTRSWLRLDGALAEITPLQRGLLIDAGSGVFPDPTALLGVHEETANTLTLPEQTVSWQDLDGGFA CADGEGQIGFLETLESGVALSGDSRAKSFSTNAGGAVGVDSGFGYYVVSEFGLMHPVSTGESMVALGITDVQVVPWSVLR LLPQGSELAKETALAPTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 44202; Mature: 44070
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGMLMPTTSAQVSGHKFLVRRIEHGLVMGDVRMIHDPLGRRRRALVFGVVACVMLAVG CCCCEECCCCCCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALAIFRPAKDPADAPLIRSESGALFVQLDGSVHPVANVASARLIVGEPVDPVNASDAI HHHEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHCCCEEEECCCCCCCCCCCEE IAGMPRGVPVGVSDAPGLFSSAKEPEQDWFVCQDVGTGDLHITVPRGGLGPTLIAEGNGW EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCC LGASKSETGEVTWNLITADGRRELPAWGSEHGRITRRHLGISEDTPRIYLTTELLNAIPE CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCEEEEEHHHHHHCCC HDAVRFPDPLPELVDASTRSWLRLDGALAEITPLQRGLLIDAGSGVFPDPTALLGVHEET CCCCCCCCCCHHHHCCCCCCEEEECCCHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCC ANTLTLPEQTVSWQDLDGGFACADGEGQIGFLETLESGVALSGDSRAKSFSTNAGGAVGV CCEEECCHHCCCEEECCCCEEEECCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCEEEC DSGFGYYVVSEFGLMHPVSTGESMVALGITDVQVVPWSVLRLLPQGSELAKETALAPTY CCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure AEGMLMPTTSAQVSGHKFLVRRIEHGLVMGDVRMIHDPLGRRRRALVFGVVACVMLAVG CCCEECCCCCCCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLALAIFRPAKDPADAPLIRSESGALFVQLDGSVHPVANVASARLIVGEPVDPVNASDAI HHHEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHCCCEEEECCCCCCCCCCCEE IAGMPRGVPVGVSDAPGLFSSAKEPEQDWFVCQDVGTGDLHITVPRGGLGPTLIAEGNGW EECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCC LGASKSETGEVTWNLITADGRRELPAWGSEHGRITRRHLGISEDTPRIYLTTELLNAIPE CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHCCCCCCCCEEEEEHHHHHHCCC HDAVRFPDPLPELVDASTRSWLRLDGALAEITPLQRGLLIDAGSGVFPDPTALLGVHEET CCCCCCCCCCHHHHCCCCCCEEEECCCHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCC ANTLTLPEQTVSWQDLDGGFACADGEGQIGFLETLESGVALSGDSRAKSFSTNAGGAVGV CCEEECCHHCCCEEECCCCEEEECCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCEEEC DSGFGYYVVSEFGLMHPVSTGESMVALGITDVQVVPWSVLRLLPQGSELAKETALAPTY CCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]