Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is secE [H]
Identifier: 145294626
GI number: 145294626
Start: 637257
End: 637592
Strand: Direct
Name: secE [H]
Synonym: cgR_0577
Alternate gene names: 145294626
Gene position: 637257-637592 (Clockwise)
Preceding gene: 145294625
Following gene: 145294627
Centisome position: 19.23
GC content: 51.49
Gene sequence:
>336_bases GTGAGCGACGAGCAGAATTCTGGCGTAGGCGGAACGTCTCGCCCAACGGGTAAACGCCAGCTGTCGGGTGCTTCCACTAC CTCTACCTCTTCATATGAGGCAAAGCAGGTATCTGCACAGAAGAAGTCATCTGATTCGGATTCTAAGCCTGGTGGCGGTG TTGTTTCTTTCCTGCCTGAGGTTGTGGGAGAAGTCCGTAAGGTTATTTGGCCTACTGCGCGCCAGATGGTCACGTACACC CTTGTGGTTTTGGGATTTTTGATTGTTTTGACCGCTTTGGTGTCTGGTGTGGATTTCCTAGCTGGTCTTGGAGTTGAGAA GATTCTGACTCCGTAG
Upstream 100 bases:
>100_bases ACTCTCGAAGGTTGAACACAGGGCTGCGATTGTGCTGGATCAAATGTCTGCACGAAAAATTGTTATCGCCCCTGGATGAG TAGTGATTTAGAGGAGTGCT
Downstream 100 bases:
>100_bases GTAGGATGTGTAACATCTTTTTTGAAAAGTCCCGCTGGTTCCCTAGAGGAGCCGGCGGGATAATTTTTGCCCAGGTGGTT GGTTTGGGGCAGCGGTTGCA
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYT LVVLGFLIVLTALVSGVDFLAGLGVEKILTP
Sequences:
>Translated_111_residues MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYT LVVLGFLIVLTALVSGVDFLAGLGVEKILTP >Mature_110_residues SDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYTL VVLGFLIVLTALVSGVDFLAGLGVEKILTP
Specific function: Essential for protein export [H]
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secE/SEC61-gamma family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001901 - InterPro: IPR005807 [H]
Pfam domain/function: PF00584 SecE [H]
EC number: NA
Molecular weight: Translated: 11546; Mature: 11415
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPE CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VVGEVRKVIWPTARQMVTYTLVVLGFLIVLTALVSGVDFLAGLGVEKILTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure SDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPE CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VVGEVRKVIWPTARQMVTYTLVVLGFLIVLTALVSGVDFLAGLGVEKILTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]