| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is fabG [H]
Identifier: 145294417
GI number: 145294417
Start: 407321
End: 408256
Strand: Direct
Name: fabG [H]
Synonym: cgR_0372
Alternate gene names: 145294417
Gene position: 407321-408256 (Clockwise)
Preceding gene: 145294413
Following gene: 145294418
Centisome position: 12.29
GC content: 56.73
Gene sequence:
>936_bases ATGTCTCTCAATGGAAAAGTCGCCATCGTTACCGGATCTGGTGCAGGACTTGGTCGTTCCTTCGCTCAGGAGCTTGCCCG TCAGGGTGCATCTGTCATCGTCAATGACGTGAACCAGGCAGCCGCAGATGAGACTGTCGCAGCAATCACCGAAGCCGGCG GCAAAGCCGCCGCCGTTATCGCCCCCGTTGGACCCTCTGAAAGCGCCGCATTGCTGGTGCGGGAGGCCGTCGACAAGTTC GGTTCTTTGGACATTCTTGTCACAAACGCGGGCATCCTTCGTGATAGGTCCCTGCTGAAGATGACGGACGATGATTTCGA TGCAGTCATTAACGTGCACCTCAAGGGCACTTTCACCTGTGTCCGCGAGGCATTTGGATACTTCAAGGAGAATGGAATCG CGGGGCGCATCGTCACGATTGGTTCTCCCACCGGGCAGCGCGGTAACTTCGGACAGAGCAATTACGCTGCAGCTAAGGCG GGCATCGTGGGTATGGTTCGCACGTGGGCGCTGGAGATGAAGCGCGCAGGTGTCACCATTAACGCGATCATTCCGGAAGC AGCCACCGATATGACCAAGACGGTGCCATATTTCCAGAAGGCTGTAGAGGCCGATGAGCGTGGCGAGGCCATGCCAGCAT TCTTCCGCGAGACCCTAGGTTTTGGCACTCCTCAGGATGTTGCGGGACTTGTGGCCTTCCTTTCCTCTGATGAGGCAGCG AATATTTCTGGACAGGCCATCGGTGCAGGCGGCGACCGCATGCAGGTGTGGAAGCACCCAGAGCCAGCAGTTACTGAATT TAACCCAGGTGGCTGGACCTATGAAGCACTGCAGGAACGTGGCAAGAACATTATTGAGGACAACCTGCAGTCCGTCGGTG TCGTTTTCCCTGAACTGCCGGCAGAGCTTCAGCCACAAATCCCAGTCAAGGCATAA
Upstream 100 bases:
>100_bases TTTTCAAAACTAATAGTTGACATTTTCAACGTTATGAGTTTTCATTGGTATCACGCCTCGACGAAGTGTCTGGGATCACA AACCTTCAAAGGAGTTTGAA
Downstream 100 bases:
>100_bases CACCGCACACCAAAAATTTTAGGAGGGGCCATGAGCAACAACGTAGTGAAATATGAGTGCGCGGTCGACGCCGACAACAT TGTCGCAGTAGATATGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSLNGKVAIVTGSGAGLGRSFAQELARQGASVIVNDVNQAAADETVAAITEAGGKAAAVIAPVGPSESAALLVREAVDKF GSLDILVTNAGILRDRSLLKMTDDDFDAVINVHLKGTFTCVREAFGYFKENGIAGRIVTIGSPTGQRGNFGQSNYAAAKA GIVGMVRTWALEMKRAGVTINAIIPEAATDMTKTVPYFQKAVEADERGEAMPAFFRETLGFGTPQDVAGLVAFLSSDEAA NISGQAIGAGGDRMQVWKHPEPAVTEFNPGGWTYEALQERGKNIIEDNLQSVGVVFPELPAELQPQIPVKA
Sequences:
>Translated_311_residues MSLNGKVAIVTGSGAGLGRSFAQELARQGASVIVNDVNQAAADETVAAITEAGGKAAAVIAPVGPSESAALLVREAVDKF GSLDILVTNAGILRDRSLLKMTDDDFDAVINVHLKGTFTCVREAFGYFKENGIAGRIVTIGSPTGQRGNFGQSNYAAAKA GIVGMVRTWALEMKRAGVTINAIIPEAATDMTKTVPYFQKAVEADERGEAMPAFFRETLGFGTPQDVAGLVAFLSSDEAA NISGQAIGAGGDRMQVWKHPEPAVTEFNPGGWTYEALQERGKNIIEDNLQSVGVVFPELPAELQPQIPVKA >Mature_310_residues SLNGKVAIVTGSGAGLGRSFAQELARQGASVIVNDVNQAAADETVAAITEAGGKAAAVIAPVGPSESAALLVREAVDKFG SLDILVTNAGILRDRSLLKMTDDDFDAVINVHLKGTFTCVREAFGYFKENGIAGRIVTIGSPTGQRGNFGQSNYAAAKAG IVGMVRTWALEMKRAGVTINAIIPEAATDMTKTVPYFQKAVEADERGEAMPAFFRETLGFGTPQDVAGLVAFLSSDEAAN ISGQAIGAGGDRMQVWKHPEPAVTEFNPGGWTYEALQERGKNIIEDNLQSVGVVFPELPAELQPQIPVKA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=296, Percent_Identity=35.8108108108108, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=39.3700787401575, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=29.8804780876494, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=27.6679841897233, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=30.8270676691729, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=36.1256544502618, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI40254992, Length=210, Percent_Identity=32.3809523809524, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=27.9527559055118, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=28.2051282051282, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=35.4651162790698, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4758504, Length=195, Percent_Identity=31.7948717948718, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI25282469, Length=212, Percent_Identity=26.8867924528302, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI83715985, Length=211, Percent_Identity=30.3317535545024, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI66933014, Length=259, Percent_Identity=25.4826254826255, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI40807363, Length=185, Percent_Identity=25.9459459459459, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI210032110, Length=187, Percent_Identity=25.1336898395722, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=27.1794871794872, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=26.8292682926829, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI142976729, Length=187, Percent_Identity=24.5989304812834, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=35.9683794466403, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=33.4661354581673, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=32.1428571428571, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=30.078125, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1788459, Length=267, Percent_Identity=29.5880149812734, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=32.03125, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=27.7777777777778, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=28.1124497991968, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=30.5019305019305, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.0196078431373, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.0983606557377, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=24.4186046511628, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787526, Length=253, Percent_Identity=25.6916996047431, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17568967, Length=204, Percent_Identity=41.6666666666667, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.8063241106719, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=32.2834645669291, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=31.8725099601594, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17564282, Length=187, Percent_Identity=32.0855614973262, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=29.1497975708502, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17531453, Length=288, Percent_Identity=29.5138888888889, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI193204405, Length=294, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=28.515625, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17567345, Length=199, Percent_Identity=28.1407035175879, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=28.2527881040892, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560220, Length=283, Percent_Identity=28.6219081272085, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17508895, Length=187, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=280, Percent_Identity=29.6428571428571, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562910, Length=274, Percent_Identity=28.1021897810219, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI193203117, Length=177, Percent_Identity=32.2033898305085, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203115, Length=173, Percent_Identity=32.9479768786127, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560150, Length=271, Percent_Identity=30.2583025830258, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=28.5198555956679, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=27.6264591439689, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562990, Length=273, Percent_Identity=29.3040293040293, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538182, Length=199, Percent_Identity=33.1658291457286, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17563726, Length=273, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536651, Length=275, Percent_Identity=26.9090909090909, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17536025, Length=263, Percent_Identity=27.7566539923954, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17544670, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=25.0936329588015, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=297, Percent_Identity=34.006734006734, Blast_Score=156, Evalue=4e-39, Organism=Drosophila melanogaster, GI18859837, Length=204, Percent_Identity=45.0980392156863, Blast_Score=164, Evalue=5e-41, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=37.2549019607843, Blast_Score=130, Evalue=9e-31, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=32.1138211382114, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI17737361, Length=237, Percent_Identity=30.379746835443, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=28.6852589641434, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=26.8482490272374, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24649181, Length=231, Percent_Identity=29.8701298701299, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=30.5882352941176, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24640492, Length=226, Percent_Identity=25.2212389380531, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28571526, Length=267, Percent_Identity=29.9625468164794, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24581726, Length=197, Percent_Identity=26.9035532994924, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24643142, Length=188, Percent_Identity=29.7872340425532, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357673, Length=202, Percent_Identity=30.6930693069307, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI221510726, Length=241, Percent_Identity=29.045643153527, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 32638; Mature: 32507
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNGKVAIVTGSGAGLGRSFAQELARQGASVIVNDVNQAAADETVAAITEAGGKAAAVI CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEE APVGPSESAALLVREAVDKFGSLDILVTNAGILRDRSLLKMTDDDFDAVINVHLKGTFTC EECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCHHEEECCCCCEEEEEEEECHHHHH VREAFGYFKENGIAGRIVTIGSPTGQRGNFGQSNYAAAKAGIVGMVRTWALEMKRAGVTI HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE NAIIPEAATDMTKTVPYFQKAVEADERGEAMPAFFRETLGFGTPQDVAGLVAFLSSDEAA EEECCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC NISGQAIGAGGDRMQVWKHPEPAVTEFNPGGWTYEALQERGKNIIEDNLQSVGVVFPELP CCCCCEECCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHCEECCCCC AELQPQIPVKA CCCCCCCCCCC >Mature Secondary Structure SLNGKVAIVTGSGAGLGRSFAQELARQGASVIVNDVNQAAADETVAAITEAGGKAAAVI CCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEE APVGPSESAALLVREAVDKFGSLDILVTNAGILRDRSLLKMTDDDFDAVINVHLKGTFTC EECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCHHEEECCCCCEEEEEEEECHHHHH VREAFGYFKENGIAGRIVTIGSPTGQRGNFGQSNYAAAKAGIVGMVRTWALEMKRAGVTI HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE NAIIPEAATDMTKTVPYFQKAVEADERGEAMPAFFRETLGFGTPQDVAGLVAFLSSDEAA EEECCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCC NISGQAIGAGGDRMQVWKHPEPAVTEFNPGGWTYEALQERGKNIIEDNLQSVGVVFPELP CCCCCEECCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHCEECCCCC AELQPQIPVKA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]