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The map label for this gene is dedA [C]

Identifier: 145294407

GI number: 145294407

Start: 396942

End: 397562

Strand: Direct

Name: dedA [C]

Synonym: cgR_0362

Alternate gene names: 145294407

Gene position: 396942-397562 (Clockwise)

Preceding gene: 145294403

Following gene: 145294409

Centisome position: 11.98

GC content: 50.89

Gene sequence:

>621_bases
TTGAATGATCAGTTGGTGAGTTGGGTGGAAACACTCATGACAGCATCGGTGTTTTATCCGGTGCTGTCAGTTGTGGTGCT
CATCGACTGTATTTTGCCGCTTATCCCCAGTGAGACTGTTCTTGCTTTGGCAGGGGCGTGGTCAGGAGCTCGGGGAACTC
CAAACTTGTGGTTGGTTATTTCAGTGGCAACGTTTGCTGCGATCCTTGGCGACAATCTGTGTTATTTCTTTGGCACGCGG
TTGATCAATATGGTGAACAGGATTCCGGGTGAATCGAGGCGCGGAAAAGCGCTGGAGTGGGCGCGGAAGAACCTTAATGA
ACGGGATGTTTCGACAATCATTATCGCCCGCTTTATTCCGTGGGCTAGGTGGTTTGTCACCATCATTTTGGGATCTGTGG
GATATTCCTGGTCGAGGTTTATCGTGTGGGATTCCATTGGAGCGCTAATTTGGGCAACCCAGGCAACTTTGTTGGGTTAT
GTGGGCGGATGGCTTTTCCAAGAACAACCGTTGATCGGCCTGGTTGTAGGCGCAGCTTTGGGAATCTTCTTCGGGTTCTT
TTTGCAGTGGCTCAACAAAATGTGGGAGAGGCGTCGTCTGGCGAAGGTGGCTGCAGAATGA

Upstream 100 bases:

>100_bases
GTGCGCGAGGTTGTGGTTTGGGGCGGAATCATCAAGGAATTGCCAGGATTGATCATTAATATCGGCTCATTAAGGCTCTT
TTTAATGAGAGGGATTCCCA

Downstream 100 bases:

>100_bases
AAATCAGGTCAGACAGTGGGAACACTATCTGACCTGGGTTTTAAGTTGTCGGGATAACAGGATTCGAACCTGCGACCTTA
CCGTCCCGAACGGCACGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: DedA Family Protein; DedA Family Membrane Protein; Membrane-Associated Protein; DedA-Like Membrane Protein; SNARE Associated Golgi Protein-Like Protein; Conserved Protein DedA Family; SNARE Associated Golgi Protein-Related Protein; Snare Associated Golgi ProteiN-Like Protein; Protein DedA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNDQLVSWVETLMTASVFYPVLSVVVLIDCILPLIPSETVLALAGAWSGARGTPNLWLVISVATFAAILGDNLCYFFGTR
LINMVNRIPGESRRGKALEWARKNLNERDVSTIIIARFIPWARWFVTIILGSVGYSWSRFIVWDSIGALIWATQATLLGY
VGGWLFQEQPLIGLVVGAALGIFFGFFLQWLNKMWERRRLAKVAAE

Sequences:

>Translated_206_residues
MNDQLVSWVETLMTASVFYPVLSVVVLIDCILPLIPSETVLALAGAWSGARGTPNLWLVISVATFAAILGDNLCYFFGTR
LINMVNRIPGESRRGKALEWARKNLNERDVSTIIIARFIPWARWFVTIILGSVGYSWSRFIVWDSIGALIWATQATLLGY
VGGWLFQEQPLIGLVVGAALGIFFGFFLQWLNKMWERRRLAKVAAE
>Mature_206_residues
MNDQLVSWVETLMTASVFYPVLSVVVLIDCILPLIPSETVLALAGAWSGARGTPNLWLVISVATFAAILGDNLCYFFGTR
LINMVNRIPGESRRGKALEWARKNLNERDVSTIIIARFIPWARWFVTIILGSVGYSWSRFIVWDSIGALIWATQATLLGY
VGGWLFQEQPLIGLVVGAALGIFFGFFLQWLNKMWERRRLAKVAAE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788656, Length=152, Percent_Identity=27.6315789473684, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23097; Mature: 23097

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQLVSWVETLMTASVFYPVLSVVVLIDCILPLIPSETVLALAGAWSGARGTPNLWLVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEHH
SVATFAAILGDNLCYFFGTRLINMVNRIPGESRRGKALEWARKNLNERDVSTIIIARFIP
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
WARWFVTIILGSVGYSWSRFIVWDSIGALIWATQATLLGYVGGWLFQEQPLIGLVVGAAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GIFFGFFLQWLNKMWERRRLAKVAAE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDQLVSWVETLMTASVFYPVLSVVVLIDCILPLIPSETVLALAGAWSGARGTPNLWLVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEHH
SVATFAAILGDNLCYFFGTRLINMVNRIPGESRRGKALEWARKNLNERDVSTIIIARFIP
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
WARWFVTIILGSVGYSWSRFIVWDSIGALIWATQATLLGYVGGWLFQEQPLIGLVVGAAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GIFFGFFLQWLNKMWERRRLAKVAAE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA