Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294246
Identifier: 145294246
GI number: 145294246
Start: 219500
End: 221050
Strand: Direct
Name: 145294246
Synonym: cgR_0202
Alternate gene names: NA
Gene position: 219500-221050 (Clockwise)
Preceding gene: 145294245
Following gene: 145294247
Centisome position: 6.62
GC content: 52.74
Gene sequence:
>1551_bases ATGAGTAACCCGTCGCTAGAACCGCTAGAACCTCTAGAACCGATCGAGCTTTCTGACGGTACTGAGATTGAAGTTCCAGA CGTTGATCCAGAACCTCAAGCTGGCAATGCGCAGATGGAAGTACCCAGCTTACGGACATATGTTTTTCGCGGAATCATTG CCATTGCCTGTTTGGTCATTGGTTTTTATGAGAGCTTTGTGCTGCTGTGGCAAAACCTCCGAATCGGAGTGGCCAACTAC TCACTACTTGTGGTGCTCATGGCGATCGTGTTGTTTATCGGACTGGACCGCAAGCGTGCTCGTGCATTGAACATTCACGA CCGCGAAGTCGACTACATCATTGGTGTCATTGCCGTACTGATAGCCATCACGATTAAGAGCCAGCTTCTGCCACGTTTTG TGGACTGGGAAACTCTGCTGCGCTTGGATATGTTCGCACTGTTATTCTTTGCGTTTGGTATTTCCGGCCTGGTGTTTGGC ATGCGCTCTACCTTTTCTTTTGCACCCGGCTGGATTTTGCTGTTTGGTTACAACGCGGTGGCACACCTGATCATCTCGGT GATTTTCGGTGGTGGCTTTTGGGGTCCGGTGATGGCAAACATCATTGGACTGTCTCTTGCGGTGTTGGTGTCCTCCAACA GGGACCTGGTTCAGGCCACCTATTTGGCACTGATGACGGTGTTGTTTGGCGTCATTTTTGCCATCATCGTGTGGGCGCTG ACCGATGGCAGTAAGTTCCTCACCTTGGTCCCAGCAGTGCTGGCAACGATCACTGTGGTGTTGGTGTCTTCGCGTTGGAG GCTTGGTCAGTGGAAGATTCGTCGTAGACAACCCACGGTGGAAAAAGCCGGACCCGCGCTTATCGCGGTCGTGGTTGCGA CAGCACTCTTAGCGTGGATTCCTACTCCTTATGTGGAGCGCGTCAACAACCTCCCCGGGCTTCAAATGCTGGCAAAGCCT GCGCCAGGTGTTATCGCACCTATTGGTTGGCACATCGACGATGTGCAGTATTACAACTGGGCTTCGCGCTACTTCGGCCC CGGTTCCTCTCTGCTTAGGCAGACGATGACGGCAGATCATTACAACGAGGCGTGGGATCCAGATGGACTCGACCGAACTG TTGTGGTGGATACCCTCCAATCGGCGGAACGGTTCCAGCAGCATGCCTTTGGTGATGAGACGCTGTATTCCACTCTGAGA GGTCGAAAGTCAGATACCGTCCAGGTAGATCTGGGATACGGCGTGGTCGGACGCGCCTACACGGTGCTCGATGAAACTGA CTTCTTGACGTACACCAAGCTGGTTTTTGAATGGCAGACCACCAACAACACCGTGGAGAAGATCTCCGTCATCGCGGTGG ATGATCACCGCGCAGAAGCGAAATTCCCGGAGCTTGCGCCATCGGTTACCAGAATGTTTATCCAGGTAGTTACCATTTTG TTCCGTGGAAATGGCGTGACCATCGATACCAATACCCAATTGAAAGATCTTGACCTGGTCAGCCAAGTTGGCCGTCAGAT CGTGGCAGAACAACAGGTGGGGAGGTCATGA
Upstream 100 bases:
>100_bases CTGATTGTCGCAGCCGTGGTGTCAGTGTCCAGGCGTTCGCAAAAAGGATACAAATGATTTCTTCTTTATCCAGTAGAACG CAGGGGAGGAGGTTGGGCAC
Downstream 100 bases:
>100_bases TGGAACAAGATCTCAGCTACCGTGAAATTCTTCCCCTCAACGCGAGTGAGGAGCAGAAAAAGGCTGCACTGATTGATGCC ATTGAAGGGTTAAGGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSNPSLEPLEPLEPIELSDGTEIEVPDVDPEPQAGNAQMEVPSLRTYVFRGIIAIACLVIGFYESFVLLWQNLRIGVANY SLLVVLMAIVLFIGLDRKRARALNIHDREVDYIIGVIAVLIAITIKSQLLPRFVDWETLLRLDMFALLFFAFGISGLVFG MRSTFSFAPGWILLFGYNAVAHLIISVIFGGGFWGPVMANIIGLSLAVLVSSNRDLVQATYLALMTVLFGVIFAIIVWAL TDGSKFLTLVPAVLATITVVLVSSRWRLGQWKIRRRQPTVEKAGPALIAVVVATALLAWIPTPYVERVNNLPGLQMLAKP APGVIAPIGWHIDDVQYYNWASRYFGPGSSLLRQTMTADHYNEAWDPDGLDRTVVVDTLQSAERFQQHAFGDETLYSTLR GRKSDTVQVDLGYGVVGRAYTVLDETDFLTYTKLVFEWQTTNNTVEKISVIAVDDHRAEAKFPELAPSVTRMFIQVVTIL FRGNGVTIDTNTQLKDLDLVSQVGRQIVAEQQVGRS
Sequences:
>Translated_516_residues MSNPSLEPLEPLEPIELSDGTEIEVPDVDPEPQAGNAQMEVPSLRTYVFRGIIAIACLVIGFYESFVLLWQNLRIGVANY SLLVVLMAIVLFIGLDRKRARALNIHDREVDYIIGVIAVLIAITIKSQLLPRFVDWETLLRLDMFALLFFAFGISGLVFG MRSTFSFAPGWILLFGYNAVAHLIISVIFGGGFWGPVMANIIGLSLAVLVSSNRDLVQATYLALMTVLFGVIFAIIVWAL TDGSKFLTLVPAVLATITVVLVSSRWRLGQWKIRRRQPTVEKAGPALIAVVVATALLAWIPTPYVERVNNLPGLQMLAKP APGVIAPIGWHIDDVQYYNWASRYFGPGSSLLRQTMTADHYNEAWDPDGLDRTVVVDTLQSAERFQQHAFGDETLYSTLR GRKSDTVQVDLGYGVVGRAYTVLDETDFLTYTKLVFEWQTTNNTVEKISVIAVDDHRAEAKFPELAPSVTRMFIQVVTIL FRGNGVTIDTNTQLKDLDLVSQVGRQIVAEQQVGRS >Mature_515_residues SNPSLEPLEPLEPIELSDGTEIEVPDVDPEPQAGNAQMEVPSLRTYVFRGIIAIACLVIGFYESFVLLWQNLRIGVANYS LLVVLMAIVLFIGLDRKRARALNIHDREVDYIIGVIAVLIAITIKSQLLPRFVDWETLLRLDMFALLFFAFGISGLVFGM RSTFSFAPGWILLFGYNAVAHLIISVIFGGGFWGPVMANIIGLSLAVLVSSNRDLVQATYLALMTVLFGVIFAIIVWALT DGSKFLTLVPAVLATITVVLVSSRWRLGQWKIRRRQPTVEKAGPALIAVVVATALLAWIPTPYVERVNNLPGLQMLAKPA PGVIAPIGWHIDDVQYYNWASRYFGPGSSLLRQTMTADHYNEAWDPDGLDRTVVVDTLQSAERFQQHAFGDETLYSTLRG RKSDTVQVDLGYGVVGRAYTVLDETDFLTYTKLVFEWQTTNNTVEKISVIAVDDHRAEAKFPELAPSVTRMFIQVVTILF RGNGVTIDTNTQLKDLDLVSQVGRQIVAEQQVGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57264; Mature: 57133
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPSLEPLEPLEPIELSDGTEIEVPDVDPEPQAGNAQMEVPSLRTYVFRGIIAIACLVI CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH GFYESFVLLWQNLRIGVANYSLLVVLMAIVLFIGLDRKRARALNIHDREVDYIIGVIAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH IAITIKSQLLPRFVDWETLLRLDMFALLFFAFGISGLVFGMRSTFSFAPGWILLFGYNAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH AHLIISVIFGGGFWGPVMANIIGLSLAVLVSSNRDLVQATYLALMTVLFGVIFAIIVWAL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TDGSKFLTLVPAVLATITVVLVSSRWRLGQWKIRRRQPTVEKAGPALIAVVVATALLAWI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHC PTPYVERVNNLPGLQMLAKPAPGVIAPIGWHIDDVQYYNWASRYFGPGSSLLRQTMTADH CCHHHHHHCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC YNEAWDPDGLDRTVVVDTLQSAERFQQHAFGDETLYSTLRGRKSDTVQVDLGYGVVGRAY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEE TVLDETDFLTYTKLVFEWQTTNNTVEKISVIAVDDHRAEAKFPELAPSVTRMFIQVVTIL EEECCCCHHEEEHEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH FRGNGVTIDTNTQLKDLDLVSQVGRQIVAEQQVGRS HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNPSLEPLEPLEPIELSDGTEIEVPDVDPEPQAGNAQMEVPSLRTYVFRGIIAIACLVI CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH GFYESFVLLWQNLRIGVANYSLLVVLMAIVLFIGLDRKRARALNIHDREVDYIIGVIAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH IAITIKSQLLPRFVDWETLLRLDMFALLFFAFGISGLVFGMRSTFSFAPGWILLFGYNAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH AHLIISVIFGGGFWGPVMANIIGLSLAVLVSSNRDLVQATYLALMTVLFGVIFAIIVWAL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TDGSKFLTLVPAVLATITVVLVSSRWRLGQWKIRRRQPTVEKAGPALIAVVVATALLAWI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHC PTPYVERVNNLPGLQMLAKPAPGVIAPIGWHIDDVQYYNWASRYFGPGSSLLRQTMTADH CCHHHHHHCCCCCHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC YNEAWDPDGLDRTVVVDTLQSAERFQQHAFGDETLYSTLRGRKSDTVQVDLGYGVVGRAY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCEE TVLDETDFLTYTKLVFEWQTTNNTVEKISVIAVDDHRAEAKFPELAPSVTRMFIQVVTIL EEECCCCHHEEEHEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH FRGNGVTIDTNTQLKDLDLVSQVGRQIVAEQQVGRS HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA