Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is 138897025
Identifier: 138897025
GI number: 138897025
Start: 3502902
End: 3504287
Strand: Reverse
Name: 138897025
Synonym: GTNG_3396
Alternate gene names: NA
Gene position: 3504287-3502902 (Counterclockwise)
Preceding gene: 138897028
Following gene: 138897024
Centisome position: 98.7
GC content: 48.56
Gene sequence:
>1386_bases ATGAATAAATATACAAATTCGTTCCATGAACGCGCCAATACGATGGCGGATAGTTTGATTTTGGAGCATTACAGCTTAAG CGAGCTCAACTTTGAAACGGTCAGCCATTACCGGGAGCGGTTTGCCCGCGTCAAGCCGGGCCATCCGTGGAACGGGCTTG AGACAAAAGAATTTTTATACAAAATTGGTGCATGGGGTAAGCTGCGCGACAGCAGCAAAGAAGGGCTGACACTCGCTGGC CTGTTGATGTTCAGCGAGGAGCGGATCATTACCGAGGTGCTGCCACAATACTTTTTAGAGTACCGGGAGTATGCCGATGC GAAGGAAACGGGTTGGACGAAGCGGTTCACTTCGCAGGACGGGACATGGTCCGGCAATGTGTACGATTTTTATTTCCGCG TGCTTGCTGAGCTGGAGCGTCACGTTTGGTCGGATGAAGGGCGCAGTATTCTTGGTGAGGCATTAGTAAATGCGCTCGTC CATGCCGATTATGGGGAAGAAGGAGGCATTACTGTCGAAAAAGAAGACGGGGCATTTCGCTTTGCTAATCCCGGTCGATT CCGCATCCCAGTTGAGGCTGCGTTGGCCGGACAAATGAGCAATTTGCGCAATCCGAACGTCTTTAAAATGTTTTTATTGA TTGACGTATGCAAGCGGGCAGGATCCGGTCTAAAACGAATGCATGATATGCAAGAACGGGTGCTTGTCCAACCGGTCGAT ATCTCGCAACAAACGAATCCTAATCGTACGATCGTTACGTTATGCCCATTGTTATTTCCAGCCGAGGCGGGCGCAACGAT TGAAACAGAAACAGACGAACCATTGCAACAGACTGAACAAGAATGGACGGAACAAGATGATCGATGGATTGAGGAGAGCT TCGTAAATAACGAACCCAACTCCATAAATACCAGCTCAAACTCCATAAATAACGAGCTAAACTCCATGAATAATGTCTCA AACTCCTTAAACAACGGTGGCGACTCCGTAAAAAACATCGGAAACTCCGTAAATAAACTGCCGAAGTCCATAAATAACGA ACCCAACTCCGTAACTAACCCACCGAACTCCGATAGTAACGAAGCGAATGTTCATGATACGGATGGAGGAGAGGAAGAGG GAAAGATCGATGAACGATTATGGAAGATGGCGGAATTGGCGCGTCAAAAAAAACGGTTGGCTCCGGCGGTGATGGAAGAG ATGATCGTCCGCTTGTGCTGCGAACGGCCGCTGCGGCTGAAGGAGCTGGCGGCGCTGCTTGAACGAACACCGGACGGGTT GCGCAACAACTATTTAGGAAAACTATTAGAAGAAGGAAAAATTCGTCTGAAATATCCTGACCAACCGAACCATCCTCGCC AAGCCTATATTGGGACGGGTAAATAA
Upstream 100 bases:
>100_bases TCTTTTTTTGGCAATCGTCCGCAAGGAGAATGAAAGATGATACAATAGAAATGGAGAAACAAGACTGTTTTGCAAAAATA ATGTTAAAGGAAGATTGGGA
Downstream 100 bases:
>100_bases TCATGTTGGTGACCAATGCGCGGCAATAAAAGGAAAAGGGTACCTTAGCGTGATATGATCCCCTTATAGTAGACAGAAAA AGAAAGCCCGCGAATCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Divergent AAA Domain Protein; Divergent AAA ATP; Divergent AAA Domain Family Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MNKYTNSFHERANTMADSLILEHYSLSELNFETVSHYRERFARVKPGHPWNGLETKEFLYKIGAWGKLRDSSKEGLTLAG LLMFSEERIITEVLPQYFLEYREYADAKETGWTKRFTSQDGTWSGNVYDFYFRVLAELERHVWSDEGRSILGEALVNALV HADYGEEGGITVEKEDGAFRFANPGRFRIPVEAALAGQMSNLRNPNVFKMFLLIDVCKRAGSGLKRMHDMQERVLVQPVD ISQQTNPNRTIVTLCPLLFPAEAGATIETETDEPLQQTEQEWTEQDDRWIEESFVNNEPNSINTSSNSINNELNSMNNVS NSLNNGGDSVKNIGNSVNKLPKSINNEPNSVTNPPNSDSNEANVHDTDGGEEEGKIDERLWKMAELARQKKRLAPAVMEE MIVRLCCERPLRLKELAALLERTPDGLRNNYLGKLLEEGKIRLKYPDQPNHPRQAYIGTGK
Sequences:
>Translated_461_residues MNKYTNSFHERANTMADSLILEHYSLSELNFETVSHYRERFARVKPGHPWNGLETKEFLYKIGAWGKLRDSSKEGLTLAG LLMFSEERIITEVLPQYFLEYREYADAKETGWTKRFTSQDGTWSGNVYDFYFRVLAELERHVWSDEGRSILGEALVNALV HADYGEEGGITVEKEDGAFRFANPGRFRIPVEAALAGQMSNLRNPNVFKMFLLIDVCKRAGSGLKRMHDMQERVLVQPVD ISQQTNPNRTIVTLCPLLFPAEAGATIETETDEPLQQTEQEWTEQDDRWIEESFVNNEPNSINTSSNSINNELNSMNNVS NSLNNGGDSVKNIGNSVNKLPKSINNEPNSVTNPPNSDSNEANVHDTDGGEEEGKIDERLWKMAELARQKKRLAPAVMEE MIVRLCCERPLRLKELAALLERTPDGLRNNYLGKLLEEGKIRLKYPDQPNHPRQAYIGTGK >Mature_461_residues MNKYTNSFHERANTMADSLILEHYSLSELNFETVSHYRERFARVKPGHPWNGLETKEFLYKIGAWGKLRDSSKEGLTLAG LLMFSEERIITEVLPQYFLEYREYADAKETGWTKRFTSQDGTWSGNVYDFYFRVLAELERHVWSDEGRSILGEALVNALV HADYGEEGGITVEKEDGAFRFANPGRFRIPVEAALAGQMSNLRNPNVFKMFLLIDVCKRAGSGLKRMHDMQERVLVQPVD ISQQTNPNRTIVTLCPLLFPAEAGATIETETDEPLQQTEQEWTEQDDRWIEESFVNNEPNSINTSSNSINNELNSMNNVS NSLNNGGDSVKNIGNSVNKLPKSINNEPNSVTNPPNSDSNEANVHDTDGGEEEGKIDERLWKMAELARQKKRLAPAVMEE MIVRLCCERPLRLKELAALLERTPDGLRNNYLGKLLEEGKIRLKYPDQPNHPRQAYIGTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52405; Mature: 52405
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYTNSFHERANTMADSLILEHYSLSELNFETVSHYRERFARVKPGHPWNGLETKEFLY CCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH KIGAWGKLRDSSKEGLTLAGLLMFSEERIITEVLPQYFLEYREYADAKETGWTKRFTSQD HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCC GTWSGNVYDFYFRVLAELERHVWSDEGRSILGEALVNALVHADYGEEGGITVEKEDGAFR CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEE FANPGRFRIPVEAALAGQMSNLRNPNVFKMFLLIDVCKRAGSGLKRMHDMQERVLVQPVD ECCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC ISQQTNPNRTIVTLCPLLFPAEAGATIETETDEPLQQTEQEWTEQDDRWIEESFVNNEPN CCCCCCCCCEEEEHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SINTSSNSINNELNSMNNVSNSLNNGGDSVKNIGNSVNKLPKSINNEPNSVTNPPNSDSN CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EANVHDTDGGEEEGKIDERLWKMAELARQKKRLAPAVMEEMIVRLCCERPLRLKELAALL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ERTPDGLRNNYLGKLLEEGKIRLKYPDQPNHPRQAYIGTGK HHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKYTNSFHERANTMADSLILEHYSLSELNFETVSHYRERFARVKPGHPWNGLETKEFLY CCCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH KIGAWGKLRDSSKEGLTLAGLLMFSEERIITEVLPQYFLEYREYADAKETGWTKRFTSQD HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCC GTWSGNVYDFYFRVLAELERHVWSDEGRSILGEALVNALVHADYGEEGGITVEKEDGAFR CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEE FANPGRFRIPVEAALAGQMSNLRNPNVFKMFLLIDVCKRAGSGLKRMHDMQERVLVQPVD ECCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC ISQQTNPNRTIVTLCPLLFPAEAGATIETETDEPLQQTEQEWTEQDDRWIEESFVNNEPN CCCCCCCCCEEEEHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SINTSSNSINNELNSMNNVSNSLNNGGDSVKNIGNSVNKLPKSINNEPNSVTNPPNSDSN CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC EANVHDTDGGEEEGKIDERLWKMAELARQKKRLAPAVMEEMIVRLCCERPLRLKELAALL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ERTPDGLRNNYLGKLLEEGKIRLKYPDQPNHPRQAYIGTGK HHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA