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The map label for this gene is ywdF [H]

Identifier: 138897005

GI number: 138897005

Start: 3482622

End: 3483473

Strand: Reverse

Name: ywdF [H]

Synonym: GTNG_3376

Alternate gene names: 138897005

Gene position: 3483473-3482622 (Counterclockwise)

Preceding gene: 138897006

Following gene: 138897004

Centisome position: 98.12

GC content: 52.93

Gene sequence:

>852_bases
GTGGATTCGTTCGTATCGGTCGTCATCCCGACGTACAATCGTCCCTATCCGTTAGCCGAGTTGCTCGAGTCACTCAGCCG
GCAGACGTATCGTTCATTTGAAGTGATTGTGGTCAATGATGGCGGCGTCCCGGTCCATGATGTTGTCGCTTTGTACCCAG
AGCTTGAGATCCGACTCATCGACCGTTGCAATGAAGGACATGTGATGGCTCGCAACGTAGGCGTCCAAGCGGCGCGCGGT
GAATACATTATGCTTTGTGATGACGATGACTTGCTTTTACCATGCCACTTAGAGCGGATGGTAGCGGCGCTCGAGCATGC
GGATTTCGCTTATTCCGATGCGGAGATTGTCCAATATCGGGTAGAAAATGACCAACGCTTGCCGATGGCCCGCTTTTTAT
TTGCCTATGAGTATGATTTGGAAGCGATGCGGACGTTCTCAACGTACGTCCCGTCCGGAAGTGTGTATCGGAAAGCACTT
CATGACGAAATCGGTTACTTTGATGTGTCGGTTCATCATTATTGGGATTGGGACTTCTTTTTGCGTGCCGCGTCCGCTTG
TCGCGTCACTCGTGTCGCGGCGGCGACTGTTTTGTACGCGTTCAGCCCGGACGGCGACAATATGTCGCGACAAATGGGAG
ACAAGCGGCGACATTACTTGCGGCGGCTTTGCGAGAAGCATGGGCTTGGCGACTTGCCCGTGAAAAACTTTTGGCTGTTG
CTTGACGAGCCGGAAGTCGCGCGTCGCCGAACTGAAAGCGAAGTCATCTGGGACGGTCAGCCGATGGTGTCGCGATTTTG
GGCGCAAAAAAAGAGGGCAACTATTGACAGGAGTTTTTTGGGTTTGCTATGA

Upstream 100 bases:

>100_bases
CATGACCAACCTTCTAAGTTGACAACCAAAAAACAGGGGCGATACCTTAAGGGTAAGCCCCTTTTTGTTTGGGAACATGG
AGAGAGGCGGTGGATTTTCG

Downstream 100 bases:

>100_bases
TAGTGAATAAAATCGTATAACGAATCGCGATGACGGATCAATAGTAGTTAACCCTCTCTTCCAAAGCGAGCCGGGGGCGG
TGGAAGCCCGGTGAAGACGG

Product: ipa-56d glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDSFVSVVIPTYNRPYPLAELLESLSRQTYRSFEVIVVNDGGVPVHDVVALYPELEIRLIDRCNEGHVMARNVGVQAARG
EYIMLCDDDDLLLPCHLERMVAALEHADFAYSDAEIVQYRVENDQRLPMARFLFAYEYDLEAMRTFSTYVPSGSVYRKAL
HDEIGYFDVSVHHYWDWDFFLRAASACRVTRVAAATVLYAFSPDGDNMSRQMGDKRRHYLRRLCEKHGLGDLPVKNFWLL
LDEPEVARRRTESEVIWDGQPMVSRFWAQKKRATIDRSFLGLL

Sequences:

>Translated_283_residues
MDSFVSVVIPTYNRPYPLAELLESLSRQTYRSFEVIVVNDGGVPVHDVVALYPELEIRLIDRCNEGHVMARNVGVQAARG
EYIMLCDDDDLLLPCHLERMVAALEHADFAYSDAEIVQYRVENDQRLPMARFLFAYEYDLEAMRTFSTYVPSGSVYRKAL
HDEIGYFDVSVHHYWDWDFFLRAASACRVTRVAAATVLYAFSPDGDNMSRQMGDKRRHYLRRLCEKHGLGDLPVKNFWLL
LDEPEVARRRTESEVIWDGQPMVSRFWAQKKRATIDRSFLGLL
>Mature_283_residues
MDSFVSVVIPTYNRPYPLAELLESLSRQTYRSFEVIVVNDGGVPVHDVVALYPELEIRLIDRCNEGHVMARNVGVQAARG
EYIMLCDDDDLLLPCHLERMVAALEHADFAYSDAEIVQYRVENDQRLPMARFLFAYEYDLEAMRTFSTYVPSGSVYRKAL
HDEIGYFDVSVHHYWDWDFFLRAASACRVTRVAAATVLYAFSPDGDNMSRQMGDKRRHYLRRLCEKHGLGDLPVKNFWLL
LDEPEVARRRTESEVIWDGQPMVSRFWAQKKRATIDRSFLGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=248, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32815; Mature: 32815

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFVSVVIPTYNRPYPLAELLESLSRQTYRSFEVIVVNDGGVPVHDVVALYPELEIRLI
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCEEEEE
DRCNEGHVMARNVGVQAARGEYIMLCDDDDLLLPCHLERMVAALEHADFAYSDAEIVQYR
ECCCCCCEEEECCCCEECCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCHHHEEEE
VENDQRLPMARFLFAYEYDLEAMRTFSTYVPSGSVYRKALHDEIGYFDVSVHHYWDWDFF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECHHHH
LRAASACRVTRVAAATVLYAFSPDGDNMSRQMGDKRRHYLRRLCEKHGLGDLPVKNFWLL
HHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LDEPEVARRRTESEVIWDGQPMVSRFWAQKKRATIDRSFLGLL
ECCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSFVSVVIPTYNRPYPLAELLESLSRQTYRSFEVIVVNDGGVPVHDVVALYPELEIRLI
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCEEEEE
DRCNEGHVMARNVGVQAARGEYIMLCDDDDLLLPCHLERMVAALEHADFAYSDAEIVQYR
ECCCCCCEEEECCCCEECCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCHHHEEEE
VENDQRLPMARFLFAYEYDLEAMRTFSTYVPSGSVYRKALHDEIGYFDVSVHHYWDWDFF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECHHHH
LRAASACRVTRVAAATVLYAFSPDGDNMSRQMGDKRRHYLRRLCEKHGLGDLPVKNFWLL
HHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LDEPEVARRRTESEVIWDGQPMVSRFWAQKKRATIDRSFLGLL
ECCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]