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The map label for this gene is atpB [H]

Identifier: 138896941

GI number: 138896941

Start: 3418172

End: 3418882

Strand: Reverse

Name: atpB [H]

Synonym: GTNG_3310

Alternate gene names: 138896941

Gene position: 3418882-3418172 (Counterclockwise)

Preceding gene: 138896942

Following gene: 138896940

Centisome position: 96.3

GC content: 44.16

Gene sequence:

>711_bases
ATGGATCATAAGGCGCCACTTTATGAATTGTTTGGTCTCACATTTAACTTGGCCAATGTATTGATGGTGACCATCACTTG
TATCATTGTATTGGCCATCGCTATTGCGGCAACGCGCAATCTTTCGATGAGGCCGACAGGGTTGCAAAACTTTATGGAAT
GGGTTGTCGATTTTGTGAAAGGAATCATTAAAAGCAACATGGACTGGGAGACAGGGGGGCGTTTTCATTTACTCGGTTTG
ACGCTCATTATGTATGTCTTTGTCGCTAATATGTTAGGTCTTCCGTTCTCCGTGGTTGTCCATGATGAATTATGGTGGAA
ATCACCGACAGCTGATCCGGCCATTACGTTGACGTTGGCTGTGATGGTTGTAGCCCTTTCCCACTATTACGGCATTAAAT
TGCGCGGTGCTTCTGAATATTTAAAAGGTTTTACAAGCCCAATGTGGTTTATGTTTCCTCTCAAAATCATTGAAGAATTC
GCCAATACATTGACACTTGGTCTCCGTCTTTACGGAAACATTTTTGCCGGCGAAATTTTGCTTGCATTGCTTGTCGGGGG
GCTGGCCACCGGTGTCGGAGGAACGATTGCCGCAATCATTCCGACAATGGTATGGCAAGCATTCAGTATTTTCGTTGGGG
CCATTCAAGCATTCATTTTCACCATGCTAACAATGGTATACATGGCGCATAAAGTCAGCCATGATCATTAA

Upstream 100 bases:

>100_bases
GCCGGTTGTCATCGGCCTGTCCACCCCATACATTTTGTTGGTAGTAAATCATTTTTTACATAATGATCAATCAGTTACAT
AGAAAGTGAGGTGAACGATG

Downstream 100 bases:

>100_bases
TCTTCATCTTAATACATGTTTGTTTACTATCATTTTTAAAATAAATCAACTTTTTAAGTTAACAAGGAGGATATCTCAAT
GGGTGTATTAGCTGCAGCAA

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDHKAPLYELFGLTFNLANVLMVTITCIIVLAIAIAATRNLSMRPTGLQNFMEWVVDFVKGIIKSNMDWETGGRFHLLGL
TLIMYVFVANMLGLPFSVVVHDELWWKSPTADPAITLTLAVMVVALSHYYGIKLRGASEYLKGFTSPMWFMFPLKIIEEF
ANTLTLGLRLYGNIFAGEILLALLVGGLATGVGGTIAAIIPTMVWQAFSIFVGAIQAFIFTMLTMVYMAHKVSHDH

Sequences:

>Translated_236_residues
MDHKAPLYELFGLTFNLANVLMVTITCIIVLAIAIAATRNLSMRPTGLQNFMEWVVDFVKGIIKSNMDWETGGRFHLLGL
TLIMYVFVANMLGLPFSVVVHDELWWKSPTADPAITLTLAVMVVALSHYYGIKLRGASEYLKGFTSPMWFMFPLKIIEEF
ANTLTLGLRLYGNIFAGEILLALLVGGLATGVGGTIAAIIPTMVWQAFSIFVGAIQAFIFTMLTMVYMAHKVSHDH
>Mature_236_residues
MDHKAPLYELFGLTFNLANVLMVTITCIIVLAIAIAATRNLSMRPTGLQNFMEWVVDFVKGIIKSNMDWETGGRFHLLGL
TLIMYVFVANMLGLPFSVVVHDELWWKSPTADPAITLTLAVMVVALSHYYGIKLRGASEYLKGFTSPMWFMFPLKIIEEF
ANTLTLGLRLYGNIFAGEILLALLVGGLATGVGGTIAAIIPTMVWQAFSIFVGAIQAFIFTMLTMVYMAHKVSHDH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=223, Percent_Identity=31.390134529148, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 26142; Mature: 26142

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKAPLYELFGLTFNLANVLMVTITCIIVLAIAIAATRNLSMRPTGLQNFMEWVVDFVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
GIIKSNMDWETGGRFHLLGLTLIMYVFVANMLGLPFSVVVHDELWWKSPTADPAITLTLA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCHHHHHHHH
VMVVALSHYYGIKLRGASEYLKGFTSPMWFMFPLKIIEEFANTLTLGLRLYGNIFAGEIL
HHHHHHHHHHCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLVGGLATGVGGTIAAIIPTMVWQAFSIFVGAIQAFIFTMLTMVYMAHKVSHDH
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDHKAPLYELFGLTFNLANVLMVTITCIIVLAIAIAATRNLSMRPTGLQNFMEWVVDFVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
GIIKSNMDWETGGRFHLLGLTLIMYVFVANMLGLPFSVVVHDELWWKSPTADPAITLTLA
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCHHHHHHHH
VMVVALSHYYGIKLRGASEYLKGFTSPMWFMFPLKIIEEFANTLTLGLRLYGNIFAGEIL
HHHHHHHHHHCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLVGGLATGVGGTIAAIIPTMVWQAFSIFVGAIQAFIFTMLTMVYMAHKVSHDH
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA