Click here to switch to the map view.

The map label for this gene is atpE

Identifier: 138896940

GI number: 138896940

Start: 3417881

End: 3418093

Strand: Reverse

Name: atpE

Synonym: GTNG_3309

Alternate gene names: 138896940

Gene position: 3418093-3417881 (Counterclockwise)

Preceding gene: 138896941

Following gene: 138896939

Centisome position: 96.28

GC content: 48.83

Gene sequence:

>213_bases
ATGGGTGTATTAGCTGCAGCAATTGCTATTGGTCTTGCCGCACTTGGTGCGGGTATCGGTAACGGTTTAATCGTTTCTCG
TACAGTAGAAGGAATCGCACGCCAGCCTGAAGCGCGTGGTATGTTGCAAACGACAATGTTTATCGGGGTTGCGCTTGTTG
AGGCGATTCCGATCATCGCGGTCGTTATCGCATTTATGGTACAAGGAAGATAA

Upstream 100 bases:

>100_bases
TAAAGTCAGCCATGATCATTAATCTTCATCTTAATACATGTTTGTTTACTATCATTTTTAAAATAAATCAACTTTTTAAG
TTAACAAGGAGGATATCTCA

Downstream 100 bases:

>100_bases
CGAATGGGGAGCGCTTGTTAACGAAATGTTAACAAGCGCCTTCAACAAAAAGAAAGGTCAAAGTCATGATGGCGAAGATC
ATTCGGTAAGAACCTTCGCC

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MGVLAAAIAIGLAALGAGIGNGLIVSRTVEGIARQPEARGMLQTTMFIGVALVEAIPIIAVVIAFMVQGR

Sequences:

>Translated_70_residues
MGVLAAAIAIGLAALGAGIGNGLIVSRTVEGIARQPEARGMLQTTMFIGVALVEAIPIIAVVIAFMVQGR
>Mature_69_residues
GVLAAAIAIGLAALGAGIGNGLIVSRTVEGIARQPEARGMLQTTMFIGVALVEAIPIIAVVIAFMVQGR

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_ANOFW (B7GMF8)

Other databases:

- EMBL:   CP000922
- RefSeq:   YP_002317045.1
- ProteinModelPortal:   B7GMF8
- SMR:   B7GMF8
- GeneID:   7038980
- GenomeReviews:   CP000922_GR
- KEGG:   afl:Aflv_2707
- HOGENOM:   HBG753983
- ProtClustDB:   PRK06876
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 7031; Mature: 6899

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10fde3fc)-; HASH(0x11f22718)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLAAAIAIGLAALGAGIGNGLIVSRTVEGIARQPEARGMLQTTMFIGVALVEAIPIIA
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVIAFMVQGR
HHHHHHHCCH
>Mature Secondary Structure 
GVLAAAIAIGLAALGAGIGNGLIVSRTVEGIARQPEARGMLQTTMFIGVALVEAIPIIA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVIAFMVQGR
HHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA