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The map label for this gene is atpF [H]

Identifier: 138896939

GI number: 138896939

Start: 3417149

End: 3417772

Strand: Reverse

Name: atpF [H]

Synonym: GTNG_3308

Alternate gene names: 138896939

Gene position: 3417772-3417149 (Counterclockwise)

Preceding gene: 138896940

Following gene: 138896938

Centisome position: 96.27

GC content: 52.56

Gene sequence:

>624_bases
ATGTATAGCCTTGACATAGAGGAACGACCGATCAAGCAATGTCCGGTCAAGACGCAACGGCCGAAAGGAGTGAACGAAAA
CATGTTAGCAGCATTACAAACAGCGGCGCTCGGCGCAGCGGCTGGGCACGGCGCGGTCAACAGCGGGGACATCATTTTTC
AGCTTGTCGCGTTTATTTTGTTGATGCTTTTGCTTCGCAAATTTGCCTGGGGACCGCTCATGGGCGTCATGAAGCAACGT
GAAGAGCATATTGCCAATGAAATCGACCAAGCGGAAAAACGCCGCCAAGAGGCAGAAAAGCTGCTTGAGGAGCAACGTGA
GCTGCTGAAGCAATCGCGCCAAGAAGCGCAAACAATCCTTGAAAATGCTCGCAAGCTCGCCGAAGAGCAGAAGGAACAAA
TCGTCGCCTCGGCCCGTGCTGAAGCAGAGCGGGTGAAAGAAGCGGCGAAGCAAGAAATCGAGCGTGAAAAAGAACAGGCG
ATGGCTGCGCTCCGCGAACAAGTGGCTTCGTTGTCTGTCCTCATCGCCTCGAAAGTGATTGAAAGAGAATTGACCGAACA
AGACCAGCGCAAGCTGATCGAAGCATACATTAAGGACATTCAAGAGGTAGGAGGAGCGCGATGA

Upstream 100 bases:

>100_bases
GAGCGCTTGTTAACGAAATGTTAACAAGCGCCTTCAACAAAAAGAAAGGTCAAAGTCATGATGGCGAAGATCATTCGGTA
AGAACCTTCGCCATTGCTTT

Downstream 100 bases:

>100_bases
ACCAAGAAGTGATCGCTAAACGGTATGCATCCGCTCTGTTTCAAATCGCGCTTGAACAACAGCAGCTGGACCAAATCGAA
GAAGACATTCGCGCCGTGCG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MYSLDIEERPIKQCPVKTQRPKGVNENMLAALQTAALGAAAGHGAVNSGDIIFQLVAFILLMLLLRKFAWGPLMGVMKQR
EEHIANEIDQAEKRRQEAEKLLEEQRELLKQSRQEAQTILENARKLAEEQKEQIVASARAEAERVKEAAKQEIEREKEQA
MAALREQVASLSVLIASKVIERELTEQDQRKLIEAYIKDIQEVGGAR

Sequences:

>Translated_207_residues
MYSLDIEERPIKQCPVKTQRPKGVNENMLAALQTAALGAAAGHGAVNSGDIIFQLVAFILLMLLLRKFAWGPLMGVMKQR
EEHIANEIDQAEKRRQEAEKLLEEQRELLKQSRQEAQTILENARKLAEEQKEQIVASARAEAERVKEAAKQEIEREKEQA
MAALREQVASLSVLIASKVIERELTEQDQRKLIEAYIKDIQEVGGAR
>Mature_207_residues
MYSLDIEERPIKQCPVKTQRPKGVNENMLAALQTAALGAAAGHGAVNSGDIIFQLVAFILLMLLLRKFAWGPLMGVMKQR
EEHIANEIDQAEKRRQEAEKLLEEQRELLKQSRQEAQTILENARKLAEEQKEQIVASARAEAERVKEAAKQEIEREKEQA
MAALREQVASLSVLIASKVIERELTEQDQRKLIEAYIKDIQEVGGAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

Organism=Escherichia coli, GI1790174, Length=157, Percent_Identity=32.484076433121, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 23395; Mature: 23395

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLDIEERPIKQCPVKTQRPKGVNENMLAALQTAALGAAAGHGAVNSGDIIFQLVAFIL
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LMLLLRKFAWGPLMGVMKQREEHIANEIDQAEKRRQEAEKLLEEQRELLKQSRQEAQTIL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENARKLAEEQKEQIVASARAEAERVKEAAKQEIEREKEQAMAALREQVASLSVLIASKVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERELTEQDQRKLIEAYIKDIQEVGGAR
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSLDIEERPIKQCPVKTQRPKGVNENMLAALQTAALGAAAGHGAVNSGDIIFQLVAFIL
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LMLLLRKFAWGPLMGVMKQREEHIANEIDQAEKRRQEAEKLLEEQRELLKQSRQEAQTIL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENARKLAEEQKEQIVASARAEAERVKEAAKQEIEREKEQAMAALREQVASLSVLIASKVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERELTEQDQRKLIEAYIKDIQEVGGAR
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA